RNA–Protein interactions for RNA: ENST00000475459.6

ACSS2-209, Transcript of acyl-CoA synthetase short chain family member 2, humanhuman

TSL 4

Gene ACSS2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSS2-209ENST00000475459 NISCHQ9Y2I1 1504 aa32.12■■■□□ 2.73
ACSS2-209ENST00000475459 CCDC180Q9P1Z9 1646 aa28.79■■■□□ 2.2
ACSS2-209ENST00000475459 ABCC9O60706 1549 aa28.24■■■□□ 2.11
ACSS2-209ENST00000475459 RB1CC1Q8TDY2 1594 aa27.07■■□□□ 1.92
ACSS2-209ENST00000475459 NACADO15069 1562 aa26.96■■□□□ 1.91
ACSS2-209ENST00000475459 UNC13AQ9UPW8 1703 aa26.77■■□□□ 1.88
ACSS2-209ENST00000475459 ZCCHC6Q5VYS8 1495 aaKnown RBP26.77■■□□□ 1.88
ACSS2-209ENST00000475459 DCAF8L2P0C7V8 631 aa26.71■■□□□ 1.87
ACSS2-209ENST00000475459 MYO15BQ96JP2 1530 aa26.68■■□□□ 1.86
ACSS2-209ENST00000475459 DCAF1Q9Y4B6 1507 aa26.53■■□□□ 1.84
ACSS2-209ENST00000475459 BICRAQ9NZM4 1560 aa26.37■■□□□ 1.81
ACSS2-209ENST00000475459 SCRIBQ14160 1630 aa26.27■■□□□ 1.8
ACSS2-209ENST00000475459 PABPN1Q86U42 306 aaKnown RBP eCLIP26.24■■□□□ 1.795e-6■□□□□ 9.2
ACSS2-209ENST00000475459 DNAJC5BQ9UF47 199 aa26■■□□□ 1.75
ACSS2-209ENST00000475459 SHROOM4Q9ULL8 1493 aa25.91■■□□□ 1.74
ACSS2-209ENST00000475459 EIF4G1Q04637 1599 aaKnown RBP25.64■■□□□ 1.69
ACSS2-209ENST00000475459 CC2D2AQ9P2K1 1620 aa25.6■■□□□ 1.69
ACSS2-209ENST00000475459 CECR2Q9BXF3 1484 aa25.35■■□□□ 1.65
ACSS2-209ENST00000475459 SMARCA4P51532 1647 aa25.07■■□□□ 1.6
ACSS2-209ENST00000475459 BAZ1AQ9NRL2 1556 aaPredicted RBP24.91■■□□□ 1.58
ACSS2-209ENST00000475459 ATAD2BQ9ULI0 1458 aa24.85■■□□□ 1.57
ACSS2-209ENST00000475459 SMARCA2P51531 1590 aa24.83■■□□□ 1.57
ACSS2-209ENST00000475459 MROH2BQ7Z745 1585 aa24.8■■□□□ 1.56
ACSS2-209ENST00000475459 NCAPD3P42695 1498 aa24.8■■□□□ 1.56
ACSS2-209ENST00000475459 HMGXB3Q12766 1538 aa24.8■■□□□ 1.56
ACSS2-209ENST00000475459 PEG3Q9GZU2 1588 aa24.76■■□□□ 1.55
ACSS2-209ENST00000475459 BAZ1BQ9UIG0 1483 aaKnown RBP24.65■■□□□ 1.54
ACSS2-209ENST00000475459 WIZO95785 1651 aa24.62■■□□□ 1.53
ACSS2-209ENST00000475459 NESP48681 1621 aa24.43■■□□□ 1.5
ACSS2-209ENST00000475459 RSF1Q96T23 1441 aaPredicted RBP24.35■■□□□ 1.49
ACSS2-209ENST00000475459 ERCC6Q03468 1493 aa24.31■■□□□ 1.48
ACSS2-209ENST00000475459 KIF21AQ7Z4S6 1674 aa24.3■■□□□ 1.48
ACSS2-209ENST00000475459 LAMC3Q9Y6N6 1575 aa24.29■■□□□ 1.48
ACSS2-209ENST00000475459 TOP2AP11388 1531 aaKnown RBP24.26■■□□□ 1.47
ACSS2-209ENST00000475459 THOC2Q8NI27 1593 aaKnown RBP24.2■■□□□ 1.46
ACSS2-209ENST00000475459 CUX2O14529 1486 aa24.11■■□□□ 1.45
ACSS2-209ENST00000475459 PRDM2Q13029 1718 aa24.07■■□□□ 1.44
ACSS2-209ENST00000475459 CADPSQ9ULU8 1353 aa24.04■■□□□ 1.44
ACSS2-209ENST00000475459 PDS5BQ9NTI5 1447 aa23.99■■□□□ 1.43
ACSS2-209ENST00000475459 CFTRP13569 1480 aa23.93■■□□□ 1.42
ACSS2-209ENST00000475459 CCDC88BA6NC98 1476 aa23.89■■□□□ 1.42
ACSS2-209ENST00000475459 MRC2Q9UBG0 1479 aa23.87■■□□□ 1.41
ACSS2-209ENST00000475459 FANCD2Q9BXW9 1451 aa23.87■■□□□ 1.41
ACSS2-209ENST00000475459 CEP164Q9UPV0 1460 aa23.87■■□□□ 1.41
ACSS2-209ENST00000475459 WDR62O43379 1518 aa23.86■■□□□ 1.41
ACSS2-209ENST00000475459 URB2Q14146 1524 aaKnown RBP23.7■■□□□ 1.38
ACSS2-209ENST00000475459 TOPBP1Q92547 1522 aa23.5■■□□□ 1.35
ACSS2-209ENST00000475459 SUPT5HO00267 1087 aaKnown RBP23.5■■□□□ 1.35
ACSS2-209ENST00000475459 DNMBPQ6XZF7 1577 aa23.49■■□□□ 1.35
ACSS2-209ENST00000475459 DNAJC5Q9H3Z4 198 aa23.45■■□□□ 1.34
ACSS2-209ENST00000475459 ABCC8Q09428 1581 aa23.35■■□□□ 1.33
ACSS2-209ENST00000475459 EIF4G3O43432 1585 aaKnown RBP23.34■■□□□ 1.33
ACSS2-209ENST00000475459 ZNF608Q9ULD9 1512 aaPredicted RBP23.33■■□□□ 1.33
ACSS2-209ENST00000475459 TARBP1Q13395 1621 aaKnown RBP23.33■■□□□ 1.33
ACSS2-209ENST00000475459 IFT140Q96RY7 1462 aa23.33■■□□□ 1.33
ACSS2-209ENST00000475459 CUX1P39880 1505 aa23.29■■□□□ 1.32
ACSS2-209ENST00000475459 POLA1P09884 1462 aaPredicted RBP23.29■■□□□ 1.32
ACSS2-209ENST00000475459 WDR97A6NE52 1622 aa23.23■■□□□ 1.31
ACSS2-209ENST00000475459 FGD5Q6ZNL6 1462 aa23.22■■□□□ 1.31
ACSS2-209ENST00000475459 RAD54L2Q9Y4B4 1467 aa23.18■■□□□ 1.3
ACSS2-209ENST00000475459 CHD1O14646 1710 aa23.17■■□□□ 1.3
ACSS2-209ENST00000475459 BIVM-ERCC5R4GMW8 1640 aa23.11■■□□□ 1.29
ACSS2-209ENST00000475459 AQRO60306 1485 aaKnown RBP eCLIP23.11■■□□□ 1.295e-10■■■■■ 51.3
ACSS2-209ENST00000475459 SYNJ1O43426 1573 aa23.09■■□□□ 1.29
ACSS2-209ENST00000475459 PBRM1Q86U86 1689 aa23.09■■□□□ 1.29
ACSS2-209ENST00000475459 SOGA1O94964 1423 aa23.07■■□□□ 1.28
ACSS2-209ENST00000475459 TOP2BQ02880 1626 aa23.04■■□□□ 1.28
ACSS2-209ENST00000475459 ABCA5Q8WWZ7 1642 aa23■■□□□ 1.27
ACSS2-209ENST00000475459 TDRD9Q8NDG6 1382 aaKnown RBP22.99■■□□□ 1.27
ACSS2-209ENST00000475459 WRNQ14191 1432 aaPredicted RBP eCLIP22.96■■□□□ 1.27
ACSS2-209ENST00000475459 SNAPC4Q5SXM2 1469 aa22.96■■□□□ 1.27
ACSS2-209ENST00000475459 ABCA10Q8WWZ4 1543 aa22.93■■□□□ 1.26
ACSS2-209ENST00000475459 OSCARQ8IYS5 282 aa22.89■■□□□ 1.25
ACSS2-209ENST00000475459 RIMBP3CA6NJZ7 1639 aa22.89■■□□□ 1.25
ACSS2-209ENST00000475459 RIMBP3BA6NNM3 1639 aa22.89■■□□□ 1.25
ACSS2-209ENST00000475459 RIMBP3Q9UFD9 1639 aa22.89■■□□□ 1.25
ACSS2-209ENST00000475459 GRIN2BQ13224 1484 aa22.86■■□□□ 1.25
ACSS2-209ENST00000475459 GAPVD1Q14C86 1478 aa22.85■■□□□ 1.25
ACSS2-209ENST00000475459 MAGI1Q96QZ7 1491 aaPredicted RBP22.85■■□□□ 1.25
ACSS2-209ENST00000475459 ADAMTS12P58397 1594 aa22.8■■□□□ 1.24
ACSS2-209ENST00000475459 ARHGEF11O15085 1522 aa22.77■■□□□ 1.24
ACSS2-209ENST00000475459 CLASP1Q7Z460 1538 aa22.77■■□□□ 1.24
ACSS2-209ENST00000475459 SYNJ2O15056 1496 aa22.77■■□□□ 1.24
ACSS2-209ENST00000475459 FBLN2P98095 1184 aa22.75■■□□□ 1.23
ACSS2-209ENST00000475459 TRIM41Q8WV44 630 aa22.68■■□□□ 1.22
ACSS2-209ENST00000475459 ERICH3Q5RHP9 1530 aa22.66■■□□□ 1.22
ACSS2-209ENST00000475459 CEP170Q5SW79 1584 aa22.63■■□□□ 1.21
ACSS2-209ENST00000475459 GRIN2AQ12879 1464 aa22.63■■□□□ 1.21
ACSS2-209ENST00000475459 CHMP7Q8WUX9 453 aaPredicted RBP22.62■■□□□ 1.21
ACSS2-209ENST00000475459 ARAP1Q96P48 1450 aa22.6■■□□□ 1.21
ACSS2-209ENST00000475459 FHAD1B1AJZ9 1412 aa22.55■■□□□ 1.2
ACSS2-209ENST00000475459 CUL7Q14999 1698 aa22.52■■□□□ 1.2
ACSS2-209ENST00000475459 NUP160Q12769 1436 aa22.51■■□□□ 1.19
ACSS2-209ENST00000475459 ERCC6L2Q5T890 1561 aa22.5■■□□□ 1.19
ACSS2-209ENST00000475459 SHROOM2Q13796 1616 aa22.49■■□□□ 1.19
ACSS2-209ENST00000475459 RUSC2Q8N2Y8 1516 aa22.48■■□□□ 1.19
ACSS2-209ENST00000475459 KIF27Q86VH2 1401 aa22.44■■□□□ 1.18
ACSS2-209ENST00000475459 CYB5RLQ6IPT4 315 aa22.38■■□□□ 1.17
ACSS2-209ENST00000475459 IGF1RP08069 1367 aa22.35■■□□□ 1.17
ACSS2-209ENST00000475459 CARMIL1Q5VZK9 1371 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms