RNA–Protein interactions for RNA: ENST00000475145.1

AGAP3-213, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

TSL 2

Gene AGAP3, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-213ENST00000475145 NISCHQ9Y2I1 1504 aa28.46■■■□□ 2.15
AGAP3-213ENST00000475145 CCDC180Q9P1Z9 1646 aa25.41■■□□□ 1.66
AGAP3-213ENST00000475145 ABCC9O60706 1549 aa24.89■■□□□ 1.57
AGAP3-213ENST00000475145 RB1CC1Q8TDY2 1594 aa24■■□□□ 1.43
AGAP3-213ENST00000475145 NACADO15069 1562 aa23.97■■□□□ 1.43
AGAP3-213ENST00000475145 MYO15BQ96JP2 1530 aa23.87■■□□□ 1.41
AGAP3-213ENST00000475145 DCAF8L2P0C7V8 631 aa23.75■■□□□ 1.39
AGAP3-213ENST00000475145 ZCCHC6Q5VYS8 1495 aaKnown RBP23.66■■□□□ 1.38
AGAP3-213ENST00000475145 DCAF1Q9Y4B6 1507 aa23.65■■□□□ 1.38
AGAP3-213ENST00000475145 UNC13AQ9UPW8 1703 aa23.31■■□□□ 1.32
AGAP3-213ENST00000475145 PABPN1Q86U42 306 aaKnown RBP eCLIP23.22■■□□□ 1.31
AGAP3-213ENST00000475145 BICRAQ9NZM4 1560 aa23.2■■□□□ 1.3
AGAP3-213ENST00000475145 SHROOM4Q9ULL8 1493 aa23.16■■□□□ 1.3
AGAP3-213ENST00000475145 DNAJC5BQ9UF47 199 aa23.01■■□□□ 1.27
AGAP3-213ENST00000475145 SCRIBQ14160 1630 aa23■■□□□ 1.27
AGAP3-213ENST00000475145 EIF4G1Q04637 1599 aaKnown RBP22.63■■□□□ 1.21
AGAP3-213ENST00000475145 CC2D2AQ9P2K1 1620 aa22.55■■□□□ 1.2
AGAP3-213ENST00000475145 CECR2Q9BXF3 1484 aa22.46■■□□□ 1.19
AGAP3-213ENST00000475145 NCAPD3P42695 1498 aa22.13■■□□□ 1.13
AGAP3-213ENST00000475145 BAZ1AQ9NRL2 1556 aaPredicted RBP22.1■■□□□ 1.13
AGAP3-213ENST00000475145 SMARCA4P51532 1647 aa22.08■■□□□ 1.13
AGAP3-213ENST00000475145 SMARCA2P51531 1590 aa22.06■■□□□ 1.12
AGAP3-213ENST00000475145 ATAD2BQ9ULI0 1458 aa22.04■■□□□ 1.12
AGAP3-213ENST00000475145 HMGXB3Q12766 1538 aa21.97■■□□□ 1.11
AGAP3-213ENST00000475145 PEG3Q9GZU2 1588 aa21.96■■□□□ 1.11
AGAP3-213ENST00000475145 MROH2BQ7Z745 1585 aa21.86■■□□□ 1.09
AGAP3-213ENST00000475145 BAZ1BQ9UIG0 1483 aaKnown RBP21.83■■□□□ 1.09
AGAP3-213ENST00000475145 RSF1Q96T23 1441 aaPredicted RBP21.6■■□□□ 1.05
AGAP3-213ENST00000475145 WIZO95785 1651 aa21.58■■□□□ 1.05
AGAP3-213ENST00000475145 LAMC3Q9Y6N6 1575 aa21.54■■□□□ 1.04
AGAP3-213ENST00000475145 ERCC6Q03468 1493 aa21.53■■□□□ 1.04
AGAP3-213ENST00000475145 NESP48681 1621 aa21.47■■□□□ 1.03
AGAP3-213ENST00000475145 CUX2O14529 1486 aa21.46■■□□□ 1.03
AGAP3-213ENST00000475145 CADPSQ9ULU8 1353 aa21.46■■□□□ 1.03
AGAP3-213ENST00000475145 PDS5BQ9NTI5 1447 aa21.44■■□□□ 1.02
AGAP3-213ENST00000475145 TOP2AP11388 1531 aaKnown RBP21.43■■□□□ 1.02
AGAP3-213ENST00000475145 CFTRP13569 1480 aa21.28■■□□□ 1
AGAP3-213ENST00000475145 THOC2Q8NI27 1593 aaKnown RBP21.23■□□□□ 0.99
AGAP3-213ENST00000475145 KIF21AQ7Z4S6 1674 aa21.21■□□□□ 0.99
AGAP3-213ENST00000475145 CCDC88BA6NC98 1476 aa21.15■□□□□ 0.98
AGAP3-213ENST00000475145 MRC2Q9UBG0 1479 aa21.15■□□□□ 0.98
AGAP3-213ENST00000475145 CEP164Q9UPV0 1460 aa21.15■□□□□ 0.98
AGAP3-213ENST00000475145 FANCD2Q9BXW9 1451 aa21.14■□□□□ 0.98
AGAP3-213ENST00000475145 WDR62O43379 1518 aa21.09■□□□□ 0.97
AGAP3-213ENST00000475145 PRDM2Q13029 1718 aa21.04■□□□□ 0.96
AGAP3-213ENST00000475145 DNAJC5Q9H3Z4 198 aa21.01■□□□□ 0.95
AGAP3-213ENST00000475145 ABCC8Q09428 1581 aa20.92■□□□□ 0.94
AGAP3-213ENST00000475145 URB2Q14146 1524 aaKnown RBP20.91■□□□□ 0.94
AGAP3-213ENST00000475145 SUPT5HO00267 1087 aaKnown RBP20.83■□□□□ 0.93
AGAP3-213ENST00000475145 TOPBP1Q92547 1522 aa20.78■□□□□ 0.92
AGAP3-213ENST00000475145 DNMBPQ6XZF7 1577 aa20.76■□□□□ 0.91
AGAP3-213ENST00000475145 IFT140Q96RY7 1462 aa20.75■□□□□ 0.91
AGAP3-213ENST00000475145 POLA1P09884 1462 aaPredicted RBP20.59■□□□□ 0.89
AGAP3-213ENST00000475145 OSCARQ8IYS5 282 aa20.56■□□□□ 0.88
AGAP3-213ENST00000475145 TARBP1Q13395 1621 aaKnown RBP20.56■□□□□ 0.88
AGAP3-213ENST00000475145 ZNF608Q9ULD9 1512 aaPredicted RBP20.55■□□□□ 0.88
AGAP3-213ENST00000475145 SOGA1O94964 1423 aa20.53■□□□□ 0.88
AGAP3-213ENST00000475145 WDR97A6NE52 1622 aa20.53■□□□□ 0.88
AGAP3-213ENST00000475145 CUX1P39880 1505 aa20.52■□□□□ 0.87
AGAP3-213ENST00000475145 FGD5Q6ZNL6 1462 aa20.5■□□□□ 0.87
AGAP3-213ENST00000475145 EIF4G3O43432 1585 aaKnown RBP20.47■□□□□ 0.87
AGAP3-213ENST00000475145 RAD54L2Q9Y4B4 1467 aa20.44■□□□□ 0.86
AGAP3-213ENST00000475145 AQRO60306 1485 aaKnown RBP eCLIP20.43■□□□□ 0.865e-8■■□□□ 12.6
AGAP3-213ENST00000475145 WRNQ14191 1432 aaPredicted RBP eCLIP20.39■□□□□ 0.85
AGAP3-213ENST00000475145 TDRD9Q8NDG6 1382 aaKnown RBP20.38■□□□□ 0.85
AGAP3-213ENST00000475145 ABCA10Q8WWZ4 1543 aa20.36■□□□□ 0.85
AGAP3-213ENST00000475145 TOP2BQ02880 1626 aa20.35■□□□□ 0.85
AGAP3-213ENST00000475145 GRIN2BQ13224 1484 aa20.34■□□□□ 0.85
AGAP3-213ENST00000475145 BIVM-ERCC5R4GMW8 1640 aa20.34■□□□□ 0.85
AGAP3-213ENST00000475145 MAGI1Q96QZ7 1491 aaPredicted RBP20.32■□□□□ 0.84
AGAP3-213ENST00000475145 GAPVD1Q14C86 1478 aa20.29■□□□□ 0.84
AGAP3-213ENST00000475145 SYNJ1O43426 1573 aa20.25■□□□□ 0.83
AGAP3-213ENST00000475145 SNAPC4Q5SXM2 1469 aa20.24■□□□□ 0.83
AGAP3-213ENST00000475145 FBLN2P98095 1184 aa20.23■□□□□ 0.83
AGAP3-213ENST00000475145 CHMP7Q8WUX9 453 aaPredicted RBP20.23■□□□□ 0.83
AGAP3-213ENST00000475145 ABCA5Q8WWZ7 1642 aa20.23■□□□□ 0.83
AGAP3-213ENST00000475145 CHD1O14646 1710 aa20.22■□□□□ 0.83
AGAP3-213ENST00000475145 SYNJ2O15056 1496 aa20.22■□□□□ 0.83
AGAP3-213ENST00000475145 PBRM1Q86U86 1689 aa20.17■□□□□ 0.82
AGAP3-213ENST00000475145 ERICH3Q5RHP9 1530 aa20.13■□□□□ 0.81
AGAP3-213ENST00000475145 ARHGEF11O15085 1522 aa20.12■□□□□ 0.81
AGAP3-213ENST00000475145 RIMBP3CA6NJZ7 1639 aa20.1■□□□□ 0.81
AGAP3-213ENST00000475145 RIMBP3BA6NNM3 1639 aa20.1■□□□□ 0.81
AGAP3-213ENST00000475145 RIMBP3Q9UFD9 1639 aa20.1■□□□□ 0.81
AGAP3-213ENST00000475145 FHAD1B1AJZ9 1412 aa20.09■□□□□ 0.81
AGAP3-213ENST00000475145 CLASP1Q7Z460 1538 aa20.07■□□□□ 0.8
AGAP3-213ENST00000475145 TRIM41Q8WV44 630 aa20.07■□□□□ 0.8
AGAP3-213ENST00000475145 GRIN2AQ12879 1464 aa20.04■□□□□ 0.8
AGAP3-213ENST00000475145 ADAMTS12P58397 1594 aa20.04■□□□□ 0.8
AGAP3-213ENST00000475145 KIF27Q86VH2 1401 aa20.01■□□□□ 0.79
AGAP3-213ENST00000475145 NUP160Q12769 1436 aa20■□□□□ 0.79
AGAP3-213ENST00000475145 CYB5RLQ6IPT4 315 aa19.94■□□□□ 0.78
AGAP3-213ENST00000475145 IGF1RP08069 1367 aa19.94■□□□□ 0.78
AGAP3-213ENST00000475145 ARAP1Q96P48 1450 aa19.92■□□□□ 0.78
AGAP3-213ENST00000475145 CUL7Q14999 1698 aa19.88■□□□□ 0.77
AGAP3-213ENST00000475145 CEP170Q5SW79 1584 aa19.88■□□□□ 0.77
AGAP3-213ENST00000475145 SHROOM2Q13796 1616 aa19.83■□□□□ 0.76
AGAP3-213ENST00000475145 CARMIL1Q5VZK9 1371 aa19.82■□□□□ 0.76
AGAP3-213ENST00000475145 JPH4Q96JJ6 628 aa19.81■□□□□ 0.76
AGAP3-213ENST00000475145 KIAA0586Q9BVV6 1533 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms