RNA–Protein interactions for RNA: ENST00000475036.1

PSMD6-205, Transcript of proteasome 26S subunit, non-ATPase 6, humanhuman

TSL 3

Gene PSMD6, Length 1,045 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD6-205ENST00000475036 NISCHQ9Y2I1 1504 aa42.52■■■■■ 4.4
PSMD6-205ENST00000475036 CCDC180Q9P1Z9 1646 aa37.7■■■■□ 3.63
PSMD6-205ENST00000475036 ABCC9O60706 1549 aa37.09■■■■□ 3.53
PSMD6-205ENST00000475036 DCAF8L2P0C7V8 631 aa35.7■■■■□ 3.31
PSMD6-205ENST00000475036 RB1CC1Q8TDY2 1594 aa35.55■■■■□ 3.28
PSMD6-205ENST00000475036 NACADO15069 1562 aa35.49■■■■□ 3.27
PSMD6-205ENST00000475036 ZCCHC6Q5VYS8 1495 aaKnown RBP35.41■■■■□ 3.26
PSMD6-205ENST00000475036 MYO15BQ96JP2 1530 aa35.23■■■■□ 3.23
PSMD6-205ENST00000475036 DCAF1Q9Y4B6 1507 aa35.1■■■■□ 3.21
PSMD6-205ENST00000475036 PABPN1Q86U42 306 aaKnown RBP eCLIP34.72■■■■□ 3.15
PSMD6-205ENST00000475036 UNC13AQ9UPW8 1703 aa34.69■■■■□ 3.14
PSMD6-205ENST00000475036 SCRIBQ14160 1630 aa34.55■■■■□ 3.12
PSMD6-205ENST00000475036 BICRAQ9NZM4 1560 aa34.5■■■■□ 3.11
PSMD6-205ENST00000475036 DNAJC5BQ9UF47 199 aa34.08■■■■□ 3.05
PSMD6-205ENST00000475036 SHROOM4Q9ULL8 1493 aa34.04■■■■□ 3.04
PSMD6-205ENST00000475036 EIF4G1Q04637 1599 aaKnown RBP33.6■■■□□ 2.97
PSMD6-205ENST00000475036 CC2D2AQ9P2K1 1620 aa33.47■■■□□ 2.95
PSMD6-205ENST00000475036 CECR2Q9BXF3 1484 aa33.29■■■□□ 2.92
PSMD6-205ENST00000475036 SMARCA4P51532 1647 aa32.98■■■□□ 2.87
PSMD6-205ENST00000475036 BAZ1AQ9NRL2 1556 aaPredicted RBP32.94■■■□□ 2.86
PSMD6-205ENST00000475036 ATAD2BQ9ULI0 1458 aa32.84■■■□□ 2.85
PSMD6-205ENST00000475036 MROH2BQ7Z745 1585 aa32.82■■■□□ 2.84
PSMD6-205ENST00000475036 NCAPD3P42695 1498 aa32.79■■■□□ 2.84
PSMD6-205ENST00000475036 SMARCA2P51531 1590 aa32.74■■■□□ 2.83
PSMD6-205ENST00000475036 PEG3Q9GZU2 1588 aa32.6■■■□□ 2.81
PSMD6-205ENST00000475036 HMGXB3Q12766 1538 aa32.59■■■□□ 2.81
PSMD6-205ENST00000475036 BAZ1BQ9UIG0 1483 aaKnown RBP32.57■■■□□ 2.8
PSMD6-205ENST00000475036 WIZO95785 1651 aa32.44■■■□□ 2.78
PSMD6-205ENST00000475036 RSF1Q96T23 1441 aaPredicted RBP32.43■■■□□ 2.78
PSMD6-205ENST00000475036 NESP48681 1621 aa32.09■■■□□ 2.73
PSMD6-205ENST00000475036 TOP2AP11388 1531 aaKnown RBP32.07■■■□□ 2.72
PSMD6-205ENST00000475036 ERCC6Q03468 1493 aa31.94■■■□□ 2.7
PSMD6-205ENST00000475036 LAMC3Q9Y6N6 1575 aa31.89■■■□□ 2.7
PSMD6-205ENST00000475036 CADPSQ9ULU8 1353 aa31.87■■■□□ 2.69
PSMD6-205ENST00000475036 CCDC88BA6NC98 1476 aa31.74■■■□□ 2.67
PSMD6-205ENST00000475036 SUPT5HO00267 1087 aaKnown RBP31.73■■■□□ 2.67
PSMD6-205ENST00000475036 PDS5BQ9NTI5 1447 aa31.73■■■□□ 2.67
PSMD6-205ENST00000475036 CFTRP13569 1480 aa31.65■■■□□ 2.66
PSMD6-205ENST00000475036 KIF21AQ7Z4S6 1674 aa31.6■■■□□ 2.65
PSMD6-205ENST00000475036 CUX2O14529 1486 aa31.52■■■□□ 2.64
PSMD6-205ENST00000475036 THOC2Q8NI27 1593 aaKnown RBP31.51■■■□□ 2.64
PSMD6-205ENST00000475036 FANCD2Q9BXW9 1451 aa31.51■■■□□ 2.63
PSMD6-205ENST00000475036 CEP164Q9UPV0 1460 aa31.46■■■□□ 2.63
PSMD6-205ENST00000475036 MRC2Q9UBG0 1479 aa31.41■■■□□ 2.62
PSMD6-205ENST00000475036 PRDM2Q13029 1718 aa31.28■■■□□ 2.6
PSMD6-205ENST00000475036 WDR62O43379 1518 aa31.28■■■□□ 2.6
PSMD6-205ENST00000475036 URB2Q14146 1524 aaKnown RBP31.2■■■□□ 2.59
PSMD6-205ENST00000475036 TOPBP1Q92547 1522 aa31■■■□□ 2.55
PSMD6-205ENST00000475036 ABCC8Q09428 1581 aa30.92■■■□□ 2.54
PSMD6-205ENST00000475036 DNMBPQ6XZF7 1577 aa30.92■■■□□ 2.54
PSMD6-205ENST00000475036 IFT140Q96RY7 1462 aa30.79■■■□□ 2.52
PSMD6-205ENST00000475036 CUX1P39880 1505 aa30.77■■■□□ 2.52
PSMD6-205ENST00000475036 POLA1P09884 1462 aaPredicted RBP30.74■■■□□ 2.51
PSMD6-205ENST00000475036 ZNF608Q9ULD9 1512 aaPredicted RBP30.71■■■□□ 2.51
PSMD6-205ENST00000475036 FGD5Q6ZNL6 1462 aa30.68■■■□□ 2.5
PSMD6-205ENST00000475036 RAD54L2Q9Y4B4 1467 aa30.66■■■□□ 2.5
PSMD6-205ENST00000475036 SOGA1O94964 1423 aa30.64■■■□□ 2.49
PSMD6-205ENST00000475036 DNAJC5Q9H3Z4 198 aa30.63■■■□□ 2.49
PSMD6-205ENST00000475036 TARBP1Q13395 1621 aaKnown RBP30.62■■■□□ 2.49
PSMD6-205ENST00000475036 WRNQ14191 1432 aaPredicted RBP eCLIP30.58■■■□□ 2.49
PSMD6-205ENST00000475036 AQRO60306 1485 aaKnown RBP eCLIP30.55■■■□□ 2.486e-6■■■■□ 23.2
PSMD6-205ENST00000475036 EIF4G3O43432 1585 aaKnown RBP30.53■■■□□ 2.48
PSMD6-205ENST00000475036 TDRD9Q8NDG6 1382 aaKnown RBP30.51■■■□□ 2.47
PSMD6-205ENST00000475036 SYNJ1O43426 1573 aa30.5■■■□□ 2.47
PSMD6-205ENST00000475036 TOP2BQ02880 1626 aa30.46■■■□□ 2.47
PSMD6-205ENST00000475036 BIVM-ERCC5R4GMW8 1640 aa30.43■■■□□ 2.46
PSMD6-205ENST00000475036 ABCA10Q8WWZ4 1543 aa30.34■■■□□ 2.45
PSMD6-205ENST00000475036 WDR97A6NE52 1622 aa30.33■■■□□ 2.45
PSMD6-205ENST00000475036 OSCARQ8IYS5 282 aa30.29■■■□□ 2.44
PSMD6-205ENST00000475036 GAPVD1Q14C86 1478 aa30.25■■■□□ 2.43
PSMD6-205ENST00000475036 GRIN2BQ13224 1484 aa30.25■■■□□ 2.43
PSMD6-205ENST00000475036 SNAPC4Q5SXM2 1469 aa30.25■■■□□ 2.43
PSMD6-205ENST00000475036 FBLN2P98095 1184 aa30.24■■■□□ 2.43
PSMD6-205ENST00000475036 ABCA5Q8WWZ7 1642 aa30.21■■■□□ 2.43
PSMD6-205ENST00000475036 MAGI1Q96QZ7 1491 aaPredicted RBP30.13■■■□□ 2.41
PSMD6-205ENST00000475036 PBRM1Q86U86 1689 aa30.13■■■□□ 2.41
PSMD6-205ENST00000475036 CHD1O14646 1710 aa30.11■■■□□ 2.41
PSMD6-205ENST00000475036 CHMP7Q8WUX9 453 aaPredicted RBP30.1■■■□□ 2.41
PSMD6-205ENST00000475036 SYNJ2O15056 1496 aa30.04■■■□□ 2.4
PSMD6-205ENST00000475036 ERICH3Q5RHP9 1530 aa29.95■■■□□ 2.38
PSMD6-205ENST00000475036 ADAMTS12P58397 1594 aa29.94■■■□□ 2.38
PSMD6-205ENST00000475036 KIF27Q86VH2 1401 aa29.93■■■□□ 2.38
PSMD6-205ENST00000475036 TRIM41Q8WV44 630 aa29.91■■■□□ 2.38
PSMD6-205ENST00000475036 FHAD1B1AJZ9 1412 aa29.9■■■□□ 2.38
PSMD6-205ENST00000475036 GRIN2AQ12879 1464 aa29.87■■■□□ 2.37
PSMD6-205ENST00000475036 IGF1RP08069 1367 aa29.83■■■□□ 2.37
PSMD6-205ENST00000475036 CLASP1Q7Z460 1538 aa29.81■■■□□ 2.36
PSMD6-205ENST00000475036 ARHGEF11O15085 1522 aa29.78■■■□□ 2.36
PSMD6-205ENST00000475036 RIMBP3CA6NJZ7 1639 aa29.77■■■□□ 2.36
PSMD6-205ENST00000475036 RIMBP3BA6NNM3 1639 aa29.77■■■□□ 2.36
PSMD6-205ENST00000475036 RIMBP3Q9UFD9 1639 aa29.77■■■□□ 2.36
PSMD6-205ENST00000475036 RUSC2Q8N2Y8 1516 aa29.73■■■□□ 2.35
PSMD6-205ENST00000475036 CEP170Q5SW79 1584 aa29.73■■■□□ 2.35
PSMD6-205ENST00000475036 NUP160Q12769 1436 aa29.71■■■□□ 2.35
PSMD6-205ENST00000475036 CUL7Q14999 1698 aa29.66■■■□□ 2.34
PSMD6-205ENST00000475036 CARMIL1Q5VZK9 1371 aa29.65■■■□□ 2.34
PSMD6-205ENST00000475036 CYB5RLQ6IPT4 315 aa29.58■■■□□ 2.33
PSMD6-205ENST00000475036 ARAP1Q96P48 1450 aa29.56■■■□□ 2.32
PSMD6-205ENST00000475036 CHIC1Q5VXU3 224 aa29.55■■■□□ 2.32
PSMD6-205ENST00000475036 ERCC6L2Q5T890 1561 aa29.47■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 772.7 ms