RNA–Protein interactions for RNA: ENST00000475004.6

DDX17-207, Transcript of DEAD-box helicase 17, humanhuman

TSL 3

Gene DDX17, Length 443 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX17-207ENST00000475004 NISCHQ9Y2I1 1504 aa24.57■■□□□ 1.52
DDX17-207ENST00000475004 CCDC180Q9P1Z9 1646 aa21.77■■□□□ 1.08
DDX17-207ENST00000475004 ABCC9O60706 1549 aa21.1■□□□□ 0.97
DDX17-207ENST00000475004 ZCCHC6Q5VYS8 1495 aaKnown RBP20.55■□□□□ 0.88
DDX17-207ENST00000475004 NACADO15069 1562 aa20.4■□□□□ 0.86
DDX17-207ENST00000475004 RB1CC1Q8TDY2 1594 aa20.38■□□□□ 0.85
DDX17-207ENST00000475004 MYO15BQ96JP2 1530 aa20.36■□□□□ 0.85
DDX17-207ENST00000475004 DCAF1Q9Y4B6 1507 aa20.35■□□□□ 0.85
DDX17-207ENST00000475004 DCAF8L2P0C7V8 631 aa20.31■□□□□ 0.84
DDX17-207ENST00000475004 UNC13AQ9UPW8 1703 aa19.96■□□□□ 0.79
DDX17-207ENST00000475004 SCRIBQ14160 1630 aa19.88■□□□□ 0.77
DDX17-207ENST00000475004 BICRAQ9NZM4 1560 aa19.81■□□□□ 0.76
DDX17-207ENST00000475004 PABPN1Q86U42 306 aaKnown RBP eCLIP19.71■□□□□ 0.75
DDX17-207ENST00000475004 SHROOM4Q9ULL8 1493 aa19.59■□□□□ 0.73
DDX17-207ENST00000475004 EIF4G1Q04637 1599 aaKnown RBP19.24■□□□□ 0.67
DDX17-207ENST00000475004 DNAJC5BQ9UF47 199 aa19.19■□□□□ 0.66
DDX17-207ENST00000475004 CECR2Q9BXF3 1484 aa19.14■□□□□ 0.65
DDX17-207ENST00000475004 CC2D2AQ9P2K1 1620 aa19.11■□□□□ 0.65
DDX17-207ENST00000475004 SMARCA4P51532 1647 aa19.04■□□□□ 0.64
DDX17-207ENST00000475004 BAZ1AQ9NRL2 1556 aaPredicted RBP19.02■□□□□ 0.64
DDX17-207ENST00000475004 MROH2BQ7Z745 1585 aa18.96■□□□□ 0.63
DDX17-207ENST00000475004 ATAD2BQ9ULI0 1458 aa18.88■□□□□ 0.61
DDX17-207ENST00000475004 PEG3Q9GZU2 1588 aa18.86■□□□□ 0.61
DDX17-207ENST00000475004 SMARCA2P51531 1590 aa18.85■□□□□ 0.61
DDX17-207ENST00000475004 NCAPD3P42695 1498 aa18.83■□□□□ 0.6
DDX17-207ENST00000475004 RSF1Q96T23 1441 aaPredicted RBP18.79■□□□□ 0.6
DDX17-207ENST00000475004 HMGXB3Q12766 1538 aa18.79■□□□□ 0.6
DDX17-207ENST00000475004 WIZO95785 1651 aa18.76■□□□□ 0.59
DDX17-207ENST00000475004 BAZ1BQ9UIG0 1483 aaKnown RBP18.71■□□□□ 0.59
DDX17-207ENST00000475004 TOP2AP11388 1531 aaKnown RBP18.58■□□□□ 0.56
DDX17-207ENST00000475004 SUPT5HO00267 1087 aaKnown RBP18.37■□□□□ 0.53
DDX17-207ENST00000475004 NESP48681 1621 aa18.34■□□□□ 0.53
DDX17-207ENST00000475004 CCDC88BA6NC98 1476 aa18.33■□□□□ 0.53
DDX17-207ENST00000475004 LAMC3Q9Y6N6 1575 aa18.3■□□□□ 0.52
DDX17-207ENST00000475004 CADPSQ9ULU8 1353 aa18.27■□□□□ 0.51
DDX17-207ENST00000475004 CFTRP13569 1480 aa18.23■□□□□ 0.51
DDX17-207ENST00000475004 ERCC6Q03468 1493 aa18.14■□□□□ 0.5
DDX17-207ENST00000475004 PDS5BQ9NTI5 1447 aa18.13■□□□□ 0.49
DDX17-207ENST00000475004 KIF21AQ7Z4S6 1674 aa18.12■□□□□ 0.49
DDX17-207ENST00000475004 PRDM2Q13029 1718 aa18.12■□□□□ 0.49
DDX17-207ENST00000475004 FANCD2Q9BXW9 1451 aa18.08■□□□□ 0.49
DDX17-207ENST00000475004 THOC2Q8NI27 1593 aaKnown RBP18.05■□□□□ 0.48
DDX17-207ENST00000475004 CEP164Q9UPV0 1460 aa18.03■□□□□ 0.48
DDX17-207ENST00000475004 MRC2Q9UBG0 1479 aa17.98■□□□□ 0.47
DDX17-207ENST00000475004 WDR62O43379 1518 aa17.94■□□□□ 0.46
DDX17-207ENST00000475004 URB2Q14146 1524 aaKnown RBP17.92■□□□□ 0.46
DDX17-207ENST00000475004 CUX2O14529 1486 aa17.91■□□□□ 0.46
DDX17-207ENST00000475004 DNMBPQ6XZF7 1577 aa17.83■□□□□ 0.44
DDX17-207ENST00000475004 TOPBP1Q92547 1522 aa17.82■□□□□ 0.44
DDX17-207ENST00000475004 CUX1P39880 1505 aa17.78■□□□□ 0.44
DDX17-207ENST00000475004 ABCC8Q09428 1581 aa17.77■□□□□ 0.44
DDX17-207ENST00000475004 WRNQ14191 1432 aaPredicted RBP eCLIP17.7■□□□□ 0.42
DDX17-207ENST00000475004 POLA1P09884 1462 aaPredicted RBP17.69■□□□□ 0.42
DDX17-207ENST00000475004 SYNJ1O43426 1573 aa17.69■□□□□ 0.42
DDX17-207ENST00000475004 TOP2BQ02880 1626 aa17.67■□□□□ 0.42
DDX17-207ENST00000475004 BIVM-ERCC5R4GMW8 1640 aa17.67■□□□□ 0.42
DDX17-207ENST00000475004 FGD5Q6ZNL6 1462 aa17.67■□□□□ 0.42
DDX17-207ENST00000475004 IFT140Q96RY7 1462 aa17.64■□□□□ 0.41
DDX17-207ENST00000475004 TARBP1Q13395 1621 aaKnown RBP17.63■□□□□ 0.41
DDX17-207ENST00000475004 RAD54L2Q9Y4B4 1467 aa17.6■□□□□ 0.41
DDX17-207ENST00000475004 ZNF608Q9ULD9 1512 aaPredicted RBP17.58■□□□□ 0.41
DDX17-207ENST00000475004 SOGA1O94964 1423 aa17.56■□□□□ 0.4
DDX17-207ENST00000475004 WDR97A6NE52 1622 aa17.56■□□□□ 0.4
DDX17-207ENST00000475004 EIF4G3O43432 1585 aaKnown RBP17.53■□□□□ 0.4
DDX17-207ENST00000475004 ABCA10Q8WWZ4 1543 aa17.52■□□□□ 0.39
DDX17-207ENST00000475004 AQRO60306 1485 aaKnown RBP eCLIP17.48■□□□□ 0.398e-16■■■□□ 19.1
DDX17-207ENST00000475004 TDRD9Q8NDG6 1382 aaKnown RBP17.46■□□□□ 0.39
DDX17-207ENST00000475004 ABCA5Q8WWZ7 1642 aa17.46■□□□□ 0.39
DDX17-207ENST00000475004 GAPVD1Q14C86 1478 aa17.39■□□□□ 0.37
DDX17-207ENST00000475004 PBRM1Q86U86 1689 aa17.37■□□□□ 0.37
DDX17-207ENST00000475004 GRIN2BQ13224 1484 aa17.37■□□□□ 0.37
DDX17-207ENST00000475004 SNAPC4Q5SXM2 1469 aa17.35■□□□□ 0.37
DDX17-207ENST00000475004 TRIM41Q8WV44 630 aa17.32■□□□□ 0.36
DDX17-207ENST00000475004 MAGI1Q96QZ7 1491 aaPredicted RBP17.31■□□□□ 0.36
DDX17-207ENST00000475004 ERICH3Q5RHP9 1530 aa17.29■□□□□ 0.36
DDX17-207ENST00000475004 KIF27Q86VH2 1401 aa17.29■□□□□ 0.36
DDX17-207ENST00000475004 CHIC1Q5VXU3 224 aa17.28■□□□□ 0.36
DDX17-207ENST00000475004 ADAMTS12P58397 1594 aa17.28■□□□□ 0.36
DDX17-207ENST00000475004 CHD1O14646 1710 aa17.25■□□□□ 0.35
DDX17-207ENST00000475004 RUSC2Q8N2Y8 1516 aa17.24■□□□□ 0.35
DDX17-207ENST00000475004 SYNJ2O15056 1496 aa17.24■□□□□ 0.35
DDX17-207ENST00000475004 IGF1RP08069 1367 aa17.2■□□□□ 0.34
DDX17-207ENST00000475004 FHAD1B1AJZ9 1412 aa17.2■□□□□ 0.34
DDX17-207ENST00000475004 CUL7Q14999 1698 aa17.17■□□□□ 0.34
DDX17-207ENST00000475004 GRIN2AQ12879 1464 aa17.17■□□□□ 0.34
DDX17-207ENST00000475004 FBLN2P98095 1184 aa17.14■□□□□ 0.33
DDX17-207ENST00000475004 CHMP7Q8WUX9 453 aaPredicted RBP17.13■□□□□ 0.33
DDX17-207ENST00000475004 OSCARQ8IYS5 282 aa17.11■□□□□ 0.33
DDX17-207ENST00000475004 CLASP1Q7Z460 1538 aa17.1■□□□□ 0.33
DDX17-207ENST00000475004 CEP170Q5SW79 1584 aa17.1■□□□□ 0.33
DDX17-207ENST00000475004 CARMIL1Q5VZK9 1371 aa17.09■□□□□ 0.33
DDX17-207ENST00000475004 NUP160Q12769 1436 aa17.09■□□□□ 0.33
DDX17-207ENST00000475004 EEA1Q15075 1411 aa17.08■□□□□ 0.32
DDX17-207ENST00000475004 DNAJC5Q9H3Z4 198 aa17.08■□□□□ 0.32
DDX17-207ENST00000475004 PRXQ9BXM0 1461 aa17.05■□□□□ 0.32
DDX17-207ENST00000475004 RAPGEF2Q9Y4G8 1499 aa17.03■□□□□ 0.32
DDX17-207ENST00000475004 CSRNP3Q8WYN3 585 aa16.99■□□□□ 0.31
DDX17-207ENST00000475004 FAM9AQ8IZU1 332 aaPredicted RBP16.97■□□□□ 0.31
DDX17-207ENST00000475004 SHROOM2Q13796 1616 aa16.96■□□□□ 0.3
DDX17-207ENST00000475004 ARHGEF11O15085 1522 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms