RNA–Protein interactions for RNA: ENST00000474970.1

FGFR1-218, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 5

Gene FGFR1, Length 764 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-218ENST00000474970 NISCHQ9Y2I1 1504 aa32.46■■■□□ 2.79
FGFR1-218ENST00000474970 CCDC180Q9P1Z9 1646 aa29.06■■■□□ 2.24
FGFR1-218ENST00000474970 ABCC9O60706 1549 aa28.83■■■□□ 2.21
FGFR1-218ENST00000474970 RB1CC1Q8TDY2 1594 aa27.59■■■□□ 2.01
FGFR1-218ENST00000474970 NACADO15069 1562 aa27.47■■□□□ 1.99
FGFR1-218ENST00000474970 DCAF8L2P0C7V8 631 aa27.29■■□□□ 1.96
FGFR1-218ENST00000474970 MYO15BQ96JP2 1530 aa27.19■■□□□ 1.94
FGFR1-218ENST00000474970 ZCCHC6Q5VYS8 1495 aaKnown RBP26.93■■□□□ 1.9
FGFR1-218ENST00000474970 DNAJC5BQ9UF47 199 aa26.89■■□□□ 1.9
FGFR1-218ENST00000474970 UNC13AQ9UPW8 1703 aa26.88■■□□□ 1.89
FGFR1-218ENST00000474970 DCAF1Q9Y4B6 1507 aa26.88■■□□□ 1.89
FGFR1-218ENST00000474970 PABPN1Q86U42 306 aaKnown RBP eCLIP26.87■■□□□ 1.89
FGFR1-218ENST00000474970 BICRAQ9NZM4 1560 aa26.73■■□□□ 1.87
FGFR1-218ENST00000474970 SHROOM4Q9ULL8 1493 aa26.5■■□□□ 1.83
FGFR1-218ENST00000474970 SCRIBQ14160 1630 aa26.41■■□□□ 1.82
FGFR1-218ENST00000474970 EIF4G1Q04637 1599 aaKnown RBP26.07■■□□□ 1.76
FGFR1-218ENST00000474970 CC2D2AQ9P2K1 1620 aa26.07■■□□□ 1.76
FGFR1-218ENST00000474970 CECR2Q9BXF3 1484 aa25.99■■□□□ 1.75
FGFR1-218ENST00000474970 NCAPD3P42695 1498 aa25.35■■□□□ 1.65
FGFR1-218ENST00000474970 ATAD2BQ9ULI0 1458 aa25.26■■□□□ 1.63
FGFR1-218ENST00000474970 SMARCA4P51532 1647 aa25.26■■□□□ 1.63
FGFR1-218ENST00000474970 SMARCA2P51531 1590 aa25.23■■□□□ 1.63
FGFR1-218ENST00000474970 BAZ1AQ9NRL2 1556 aaPredicted RBP25.2■■□□□ 1.62
FGFR1-218ENST00000474970 HMGXB3Q12766 1538 aa25.17■■□□□ 1.62
FGFR1-218ENST00000474970 PEG3Q9GZU2 1588 aa25.06■■□□□ 1.6
FGFR1-218ENST00000474970 BAZ1BQ9UIG0 1483 aaKnown RBP25.02■■□□□ 1.6
FGFR1-218ENST00000474970 MROH2BQ7Z745 1585 aa24.97■■□□□ 1.59
FGFR1-218ENST00000474970 ERCC6Q03468 1493 aa24.92■■□□□ 1.58
FGFR1-218ENST00000474970 CUX2O14529 1486 aa24.86■■□□□ 1.57
FGFR1-218ENST00000474970 NESP48681 1621 aa24.8■■□□□ 1.56
FGFR1-218ENST00000474970 LAMC3Q9Y6N6 1575 aa24.74■■□□□ 1.55
FGFR1-218ENST00000474970 WIZO95785 1651 aa24.66■■□□□ 1.54
FGFR1-218ENST00000474970 DNAJC5Q9H3Z4 198 aa24.65■■□□□ 1.54
FGFR1-218ENST00000474970 PDS5BQ9NTI5 1447 aa24.61■■□□□ 1.53
FGFR1-218ENST00000474970 CADPSQ9ULU8 1353 aa24.58■■□□□ 1.53
FGFR1-218ENST00000474970 RSF1Q96T23 1441 aaPredicted RBP24.54■■□□□ 1.52
FGFR1-218ENST00000474970 THOC2Q8NI27 1593 aaKnown RBP24.54■■□□□ 1.52
FGFR1-218ENST00000474970 KIF21AQ7Z4S6 1674 aa24.49■■□□□ 1.51
FGFR1-218ENST00000474970 TOP2AP11388 1531 aaKnown RBP24.4■■□□□ 1.5
FGFR1-218ENST00000474970 MRC2Q9UBG0 1479 aa24.34■■□□□ 1.49
FGFR1-218ENST00000474970 CFTRP13569 1480 aa24.33■■□□□ 1.49
FGFR1-218ENST00000474970 CEP164Q9UPV0 1460 aa24.28■■□□□ 1.48
FGFR1-218ENST00000474970 WDR62O43379 1518 aa24.28■■□□□ 1.48
FGFR1-218ENST00000474970 FANCD2Q9BXW9 1451 aa24.27■■□□□ 1.48
FGFR1-218ENST00000474970 CCDC88BA6NC98 1476 aa24.13■■□□□ 1.45
FGFR1-218ENST00000474970 PRDM2Q13029 1718 aa24.07■■□□□ 1.44
FGFR1-218ENST00000474970 URB2Q14146 1524 aaKnown RBP24.03■■□□□ 1.44
FGFR1-218ENST00000474970 ABCC8Q09428 1581 aa23.86■■□□□ 1.41
FGFR1-218ENST00000474970 TOPBP1Q92547 1522 aa23.82■■□□□ 1.4
FGFR1-218ENST00000474970 IFT140Q96RY7 1462 aa23.81■■□□□ 1.4
FGFR1-218ENST00000474970 OSCARQ8IYS5 282 aa23.77■■□□□ 1.4
FGFR1-218ENST00000474970 DNMBPQ6XZF7 1577 aa23.76■■□□□ 1.39
FGFR1-218ENST00000474970 ZNF608Q9ULD9 1512 aaPredicted RBP23.69■■□□□ 1.38
FGFR1-218ENST00000474970 TARBP1Q13395 1621 aaKnown RBP23.59■■□□□ 1.37
FGFR1-218ENST00000474970 POLA1P09884 1462 aaPredicted RBP23.59■■□□□ 1.37
FGFR1-218ENST00000474970 EIF4G3O43432 1585 aaKnown RBP23.58■■□□□ 1.37
FGFR1-218ENST00000474970 TRIM41Q8WV44 630 aa23.56■■□□□ 1.36
FGFR1-218ENST00000474970 SUPT5HO00267 1087 aaKnown RBP23.55■■□□□ 1.36
FGFR1-218ENST00000474970 AQRO60306 1485 aaKnown RBP eCLIP23.52■■□□□ 1.36
FGFR1-218ENST00000474970 SOGA1O94964 1423 aa23.51■■□□□ 1.35
FGFR1-218ENST00000474970 RAD54L2Q9Y4B4 1467 aa23.47■■□□□ 1.35
FGFR1-218ENST00000474970 CUX1P39880 1505 aa23.45■■□□□ 1.34
FGFR1-218ENST00000474970 FGD5Q6ZNL6 1462 aa23.45■■□□□ 1.34
FGFR1-218ENST00000474970 WDR97A6NE52 1622 aa23.44■■□□□ 1.34
FGFR1-218ENST00000474970 TDRD9Q8NDG6 1382 aaKnown RBP23.41■■□□□ 1.34
FGFR1-218ENST00000474970 RIMBP3CA6NJZ7 1639 aa23.36■■□□□ 1.33
FGFR1-218ENST00000474970 RIMBP3BA6NNM3 1639 aa23.36■■□□□ 1.33
FGFR1-218ENST00000474970 RIMBP3Q9UFD9 1639 aa23.36■■□□□ 1.33
FGFR1-218ENST00000474970 CHD1O14646 1710 aa23.36■■□□□ 1.33
FGFR1-218ENST00000474970 FBLN2P98095 1184 aa23.35■■□□□ 1.33
FGFR1-218ENST00000474970 ARHGEF11O15085 1522 aa23.33■■□□□ 1.32
FGFR1-218ENST00000474970 GRIN2BQ13224 1484 aa23.29■■□□□ 1.32
FGFR1-218ENST00000474970 MAGI1Q96QZ7 1491 aaPredicted RBP23.29■■□□□ 1.32
FGFR1-218ENST00000474970 SNAPC4Q5SXM2 1469 aa23.28■■□□□ 1.32
FGFR1-218ENST00000474970 CHMP7Q8WUX9 453 aaPredicted RBP23.24■■□□□ 1.31
FGFR1-218ENST00000474970 ABCA10Q8WWZ4 1543 aa23.23■■□□□ 1.31
FGFR1-218ENST00000474970 GAPVD1Q14C86 1478 aa23.22■■□□□ 1.31
FGFR1-218ENST00000474970 SYNJ2O15056 1496 aa23.19■■□□□ 1.3
FGFR1-218ENST00000474970 WRNQ14191 1432 aaPredicted RBP eCLIP23.19■■□□□ 1.3
FGFR1-218ENST00000474970 SYNJ1O43426 1573 aa23.16■■□□□ 1.3
FGFR1-218ENST00000474970 CYB5RLQ6IPT4 315 aa23.16■■□□□ 1.3
FGFR1-218ENST00000474970 PBRM1Q86U86 1689 aa23.16■■□□□ 1.3
FGFR1-218ENST00000474970 TOP2BQ02880 1626 aa23.15■■□□□ 1.3
FGFR1-218ENST00000474970 ABCA5Q8WWZ7 1642 aa23.15■■□□□ 1.3
FGFR1-218ENST00000474970 BIVM-ERCC5R4GMW8 1640 aa23.15■■□□□ 1.3
FGFR1-218ENST00000474970 CLASP1Q7Z460 1538 aa23.13■■□□□ 1.29
FGFR1-218ENST00000474970 ARAP1Q96P48 1450 aa23.09■■□□□ 1.29
FGFR1-218ENST00000474970 GRIN2AQ12879 1464 aa22.98■■□□□ 1.27
FGFR1-218ENST00000474970 ERICH3Q5RHP9 1530 aa22.96■■□□□ 1.27
FGFR1-218ENST00000474970 ADAMTS12P58397 1594 aa22.96■■□□□ 1.27
FGFR1-218ENST00000474970 FHAD1B1AJZ9 1412 aa22.95■■□□□ 1.26
FGFR1-218ENST00000474970 NUP160Q12769 1436 aa22.91■■□□□ 1.26
FGFR1-218ENST00000474970 CEP170Q5SW79 1584 aa22.84■■□□□ 1.25
FGFR1-218ENST00000474970 TRHP20396 242 aaPredicted RBP22.84■■□□□ 1.25
FGFR1-218ENST00000474970 SHROOM2Q13796 1616 aa22.77■■□□□ 1.24
FGFR1-218ENST00000474970 KIF27Q86VH2 1401 aa22.74■■□□□ 1.23
FGFR1-218ENST00000474970 ERCC6L2Q5T890 1561 aa22.72■■□□□ 1.23
FGFR1-218ENST00000474970 IGF1RP08069 1367 aa22.7■■□□□ 1.22
FGFR1-218ENST00000474970 JPH4Q96JJ6 628 aa22.69■■□□□ 1.22
FGFR1-218ENST00000474970 PRG4Q92954 1404 aaPredicted RBP22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms