RNA–Protein interactions for RNA: ENST00000474955.5

ATP13A1-208, Transcript of ATPase 13A1, humanhuman

TSL 5

Gene ATP13A1, Length 927 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1-208ENST00000474955 NISCHQ9Y2I1 1504 aa34.17■■■■□ 3.06
ATP13A1-208ENST00000474955 CCDC180Q9P1Z9 1646 aa30.4■■■□□ 2.46
ATP13A1-208ENST00000474955 ABCC9O60706 1549 aa29.92■■■□□ 2.38
ATP13A1-208ENST00000474955 RB1CC1Q8TDY2 1594 aa28.7■■■□□ 2.18
ATP13A1-208ENST00000474955 NACADO15069 1562 aa28.65■■■□□ 2.18
ATP13A1-208ENST00000474955 DCAF8L2P0C7V8 631 aa28.61■■■□□ 2.17
ATP13A1-208ENST00000474955 MYO15BQ96JP2 1530 aa28.46■■■□□ 2.15
ATP13A1-208ENST00000474955 ZCCHC6Q5VYS8 1495 aaKnown RBP28.43■■■□□ 2.14
ATP13A1-208ENST00000474955 DCAF1Q9Y4B6 1507 aa28.27■■■□□ 2.12
ATP13A1-208ENST00000474955 UNC13AQ9UPW8 1703 aa28.01■■■□□ 2.07
ATP13A1-208ENST00000474955 PABPN1Q86U42 306 aaKnown RBP eCLIP27.97■■■□□ 2.07
ATP13A1-208ENST00000474955 BICRAQ9NZM4 1560 aa27.86■■■□□ 2.05
ATP13A1-208ENST00000474955 SCRIBQ14160 1630 aa27.72■■■□□ 2.03
ATP13A1-208ENST00000474955 DNAJC5BQ9UF47 199 aa27.67■■■□□ 2.02
ATP13A1-208ENST00000474955 SHROOM4Q9ULL8 1493 aa27.55■■■□□ 2
ATP13A1-208ENST00000474955 EIF4G1Q04637 1599 aaKnown RBP27.13■■□□□ 1.93
ATP13A1-208ENST00000474955 CC2D2AQ9P2K1 1620 aa27.05■■□□□ 1.92
ATP13A1-208ENST00000474955 CECR2Q9BXF3 1484 aa26.91■■□□□ 1.9
ATP13A1-208ENST00000474955 SMARCA4P51532 1647 aa26.53■■□□□ 1.84
ATP13A1-208ENST00000474955 NCAPD3P42695 1498 aa26.48■■□□□ 1.83
ATP13A1-208ENST00000474955 BAZ1AQ9NRL2 1556 aaPredicted RBP26.47■■□□□ 1.83
ATP13A1-208ENST00000474955 ATAD2BQ9ULI0 1458 aa26.45■■□□□ 1.82
ATP13A1-208ENST00000474955 SMARCA2P51531 1590 aa26.38■■□□□ 1.81
ATP13A1-208ENST00000474955 MROH2BQ7Z745 1585 aa26.33■■□□□ 1.81
ATP13A1-208ENST00000474955 HMGXB3Q12766 1538 aa26.29■■□□□ 1.8
ATP13A1-208ENST00000474955 PEG3Q9GZU2 1588 aa26.29■■□□□ 1.8
ATP13A1-208ENST00000474955 BAZ1BQ9UIG0 1483 aaKnown RBP26.2■■□□□ 1.78
ATP13A1-208ENST00000474955 WIZO95785 1651 aa26.01■■□□□ 1.75
ATP13A1-208ENST00000474955 RSF1Q96T23 1441 aaPredicted RBP26■■□□□ 1.75
ATP13A1-208ENST00000474955 NESP48681 1621 aa25.85■■□□□ 1.73
ATP13A1-208ENST00000474955 ERCC6Q03468 1493 aa25.79■■□□□ 1.72
ATP13A1-208ENST00000474955 LAMC3Q9Y6N6 1575 aa25.75■■□□□ 1.71
ATP13A1-208ENST00000474955 TOP2AP11388 1531 aaKnown RBP25.73■■□□□ 1.71
ATP13A1-208ENST00000474955 CADPSQ9ULU8 1353 aa25.69■■□□□ 1.7
ATP13A1-208ENST00000474955 PDS5BQ9NTI5 1447 aa25.61■■□□□ 1.69
ATP13A1-208ENST00000474955 CUX2O14529 1486 aa25.59■■□□□ 1.69
ATP13A1-208ENST00000474955 CFTRP13569 1480 aa25.5■■□□□ 1.67
ATP13A1-208ENST00000474955 KIF21AQ7Z4S6 1674 aa25.5■■□□□ 1.67
ATP13A1-208ENST00000474955 THOC2Q8NI27 1593 aaKnown RBP25.47■■□□□ 1.67
ATP13A1-208ENST00000474955 CCDC88BA6NC98 1476 aa25.47■■□□□ 1.67
ATP13A1-208ENST00000474955 FANCD2Q9BXW9 1451 aa25.37■■□□□ 1.65
ATP13A1-208ENST00000474955 MRC2Q9UBG0 1479 aa25.34■■□□□ 1.65
ATP13A1-208ENST00000474955 CEP164Q9UPV0 1460 aa25.34■■□□□ 1.65
ATP13A1-208ENST00000474955 WDR62O43379 1518 aa25.27■■□□□ 1.64
ATP13A1-208ENST00000474955 SUPT5HO00267 1087 aaKnown RBP25.21■■□□□ 1.63
ATP13A1-208ENST00000474955 PRDM2Q13029 1718 aa25.2■■□□□ 1.62
ATP13A1-208ENST00000474955 URB2Q14146 1524 aaKnown RBP25.13■■□□□ 1.61
ATP13A1-208ENST00000474955 DNAJC5Q9H3Z4 198 aa25.02■■□□□ 1.6
ATP13A1-208ENST00000474955 TOPBP1Q92547 1522 aa24.95■■□□□ 1.58
ATP13A1-208ENST00000474955 ABCC8Q09428 1581 aa24.94■■□□□ 1.58
ATP13A1-208ENST00000474955 DNMBPQ6XZF7 1577 aa24.89■■□□□ 1.58
ATP13A1-208ENST00000474955 IFT140Q96RY7 1462 aa24.83■■□□□ 1.56
ATP13A1-208ENST00000474955 ZNF608Q9ULD9 1512 aaPredicted RBP24.73■■□□□ 1.55
ATP13A1-208ENST00000474955 POLA1P09884 1462 aaPredicted RBP24.73■■□□□ 1.55
ATP13A1-208ENST00000474955 CUX1P39880 1505 aa24.71■■□□□ 1.55
ATP13A1-208ENST00000474955 TARBP1Q13395 1621 aaKnown RBP24.68■■□□□ 1.54
ATP13A1-208ENST00000474955 FGD5Q6ZNL6 1462 aa24.64■■□□□ 1.54
ATP13A1-208ENST00000474955 SOGA1O94964 1423 aa24.64■■□□□ 1.54
ATP13A1-208ENST00000474955 RAD54L2Q9Y4B4 1467 aa24.63■■□□□ 1.53
ATP13A1-208ENST00000474955 EIF4G3O43432 1585 aaKnown RBP24.59■■□□□ 1.53
ATP13A1-208ENST00000474955 AQRO60306 1485 aaKnown RBP eCLIP24.58■■□□□ 1.531e-6■■■■■ 41.4
ATP13A1-208ENST00000474955 OSCARQ8IYS5 282 aa24.53■■□□□ 1.52
ATP13A1-208ENST00000474955 TDRD9Q8NDG6 1382 aaKnown RBP24.52■■□□□ 1.52
ATP13A1-208ENST00000474955 WRNQ14191 1432 aaPredicted RBP eCLIP24.5■■□□□ 1.51
ATP13A1-208ENST00000474955 WDR97A6NE52 1622 aa24.46■■□□□ 1.51
ATP13A1-208ENST00000474955 TOP2BQ02880 1626 aa24.44■■□□□ 1.5
ATP13A1-208ENST00000474955 BIVM-ERCC5R4GMW8 1640 aa24.43■■□□□ 1.5
ATP13A1-208ENST00000474955 SYNJ1O43426 1573 aa24.42■■□□□ 1.5
ATP13A1-208ENST00000474955 ABCA10Q8WWZ4 1543 aa24.4■■□□□ 1.5
ATP13A1-208ENST00000474955 GRIN2BQ13224 1484 aa24.36■■□□□ 1.49
ATP13A1-208ENST00000474955 GAPVD1Q14C86 1478 aa24.34■■□□□ 1.49
ATP13A1-208ENST00000474955 SNAPC4Q5SXM2 1469 aa24.33■■□□□ 1.49
ATP13A1-208ENST00000474955 FBLN2P98095 1184 aa24.31■■□□□ 1.48
ATP13A1-208ENST00000474955 ABCA5Q8WWZ7 1642 aa24.3■■□□□ 1.48
ATP13A1-208ENST00000474955 MAGI1Q96QZ7 1491 aaPredicted RBP24.3■■□□□ 1.48
ATP13A1-208ENST00000474955 CHD1O14646 1710 aa24.29■■□□□ 1.48
ATP13A1-208ENST00000474955 CHMP7Q8WUX9 453 aaPredicted RBP24.24■■□□□ 1.47
ATP13A1-208ENST00000474955 PBRM1Q86U86 1689 aa24.24■■□□□ 1.47
ATP13A1-208ENST00000474955 SYNJ2O15056 1496 aa24.22■■□□□ 1.47
ATP13A1-208ENST00000474955 ERICH3Q5RHP9 1530 aa24.1■■□□□ 1.45
ATP13A1-208ENST00000474955 RIMBP3CA6NJZ7 1639 aa24.1■■□□□ 1.45
ATP13A1-208ENST00000474955 RIMBP3BA6NNM3 1639 aa24.1■■□□□ 1.45
ATP13A1-208ENST00000474955 RIMBP3Q9UFD9 1639 aa24.1■■□□□ 1.45
ATP13A1-208ENST00000474955 TRIM41Q8WV44 630 aa24.1■■□□□ 1.45
ATP13A1-208ENST00000474955 ARHGEF11O15085 1522 aa24.1■■□□□ 1.45
ATP13A1-208ENST00000474955 CLASP1Q7Z460 1538 aa24.07■■□□□ 1.44
ATP13A1-208ENST00000474955 ADAMTS12P58397 1594 aa24.07■■□□□ 1.44
ATP13A1-208ENST00000474955 FHAD1B1AJZ9 1412 aa24.06■■□□□ 1.44
ATP13A1-208ENST00000474955 GRIN2AQ12879 1464 aa24.04■■□□□ 1.44
ATP13A1-208ENST00000474955 KIF27Q86VH2 1401 aa24■■□□□ 1.43
ATP13A1-208ENST00000474955 NUP160Q12769 1436 aa23.96■■□□□ 1.43
ATP13A1-208ENST00000474955 IGF1RP08069 1367 aa23.95■■□□□ 1.42
ATP13A1-208ENST00000474955 CEP170Q5SW79 1584 aa23.91■■□□□ 1.42
ATP13A1-208ENST00000474955 CYB5RLQ6IPT4 315 aa23.91■■□□□ 1.42
ATP13A1-208ENST00000474955 ARAP1Q96P48 1450 aa23.9■■□□□ 1.42
ATP13A1-208ENST00000474955 CUL7Q14999 1698 aa23.82■■□□□ 1.4
ATP13A1-208ENST00000474955 CARMIL1Q5VZK9 1371 aa23.79■■□□□ 1.4
ATP13A1-208ENST00000474955 SHROOM2Q13796 1616 aa23.76■■□□□ 1.39
ATP13A1-208ENST00000474955 RUSC2Q8N2Y8 1516 aa23.75■■□□□ 1.39
ATP13A1-208ENST00000474955 JPH4Q96JJ6 628 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 128.1 ms