RNA–Protein interactions for RNA: ENST00000474947.1

TFR2-210, Transcript of transferrin receptor 2, humanhuman

TSL 2

Gene TFR2, Length 1,514 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFR2-210ENST00000474947 NISCHQ9Y2I1 1504 aa42.35■■■■■ 4.37
TFR2-210ENST00000474947 ABCC9O60706 1549 aa38.75■■■■□ 3.79
TFR2-210ENST00000474947 CCDC180Q9P1Z9 1646 aa38.19■■■■□ 3.7
TFR2-210ENST00000474947 DNAJC5BQ9UF47 199 aa36.76■■■■□ 3.48
TFR2-210ENST00000474947 RB1CC1Q8TDY2 1594 aa36.65■■■■□ 3.46
TFR2-210ENST00000474947 NACADO15069 1562 aa36.25■■■■□ 3.39
TFR2-210ENST00000474947 DCAF8L2P0C7V8 631 aa36.14■■■■□ 3.38
TFR2-210ENST00000474947 PABPN1Q86U42 306 aaKnown RBP eCLIP36.03■■■■□ 3.36
TFR2-210ENST00000474947 UNC13AQ9UPW8 1703 aa35.73■■■■□ 3.31
TFR2-210ENST00000474947 MYO15BQ96JP2 1530 aa35.55■■■■□ 3.28
TFR2-210ENST00000474947 BICRAQ9NZM4 1560 aa35.53■■■■□ 3.28
TFR2-210ENST00000474947 SHROOM4Q9ULL8 1493 aa35.03■■■■□ 3.2
TFR2-210ENST00000474947 ZCCHC6Q5VYS8 1495 aaKnown RBP34.96■■■■□ 3.19
TFR2-210ENST00000474947 CECR2Q9BXF3 1484 aa34.96■■■■□ 3.19
TFR2-210ENST00000474947 CC2D2AQ9P2K1 1620 aa34.94■■■■□ 3.18
TFR2-210ENST00000474947 DCAF1Q9Y4B6 1507 aa34.92■■■■□ 3.18
TFR2-210ENST00000474947 SCRIBQ14160 1630 aa34.8■■■■□ 3.16
TFR2-210ENST00000474947 EIF4G1Q04637 1599 aaKnown RBP34.73■■■■□ 3.15
TFR2-210ENST00000474947 DNAJC5Q9H3Z4 198 aa34.17■■■■□ 3.06
TFR2-210ENST00000474947 CUX2O14529 1486 aa33.58■■■□□ 2.97
TFR2-210ENST00000474947 ERCC6Q03468 1493 aa33.53■■■□□ 2.96
TFR2-210ENST00000474947 NCAPD3P42695 1498 aa33.48■■■□□ 2.95
TFR2-210ENST00000474947 ATAD2BQ9ULI0 1458 aa33.3■■■□□ 2.92
TFR2-210ENST00000474947 SMARCA2P51531 1590 aa33.2■■■□□ 2.91
TFR2-210ENST00000474947 HMGXB3Q12766 1538 aa33.16■■■□□ 2.9
TFR2-210ENST00000474947 SMARCA4P51532 1647 aa33.13■■■□□ 2.89
TFR2-210ENST00000474947 NESP48681 1621 aa33.11■■■□□ 2.89
TFR2-210ENST00000474947 BAZ1BQ9UIG0 1483 aaKnown RBP32.99■■■□□ 2.87
TFR2-210ENST00000474947 BAZ1AQ9NRL2 1556 aaPredicted RBP32.92■■■□□ 2.86
TFR2-210ENST00000474947 THOC2Q8NI27 1593 aaKnown RBP32.83■■■□□ 2.85
TFR2-210ENST00000474947 LAMC3Q9Y6N6 1575 aa32.81■■■□□ 2.84
TFR2-210ENST00000474947 PEG3Q9GZU2 1588 aa32.78■■■□□ 2.84
TFR2-210ENST00000474947 PDS5BQ9NTI5 1447 aa32.69■■■□□ 2.82
TFR2-210ENST00000474947 KIF21AQ7Z4S6 1674 aa32.64■■■□□ 2.82
TFR2-210ENST00000474947 MROH2BQ7Z745 1585 aa32.62■■■□□ 2.81
TFR2-210ENST00000474947 TRIM41Q8WV44 630 aa32.54■■■□□ 2.8
TFR2-210ENST00000474947 CADPSQ9ULU8 1353 aa32.47■■■□□ 2.79
TFR2-210ENST00000474947 MRC2Q9UBG0 1479 aa32.4■■■□□ 2.78
TFR2-210ENST00000474947 WDR62O43379 1518 aa32.29■■■□□ 2.76
TFR2-210ENST00000474947 WIZO95785 1651 aa32.2■■■□□ 2.75
TFR2-210ENST00000474947 CEP164Q9UPV0 1460 aa32.18■■■□□ 2.74
TFR2-210ENST00000474947 FANCD2Q9BXW9 1451 aa32.1■■■□□ 2.73
TFR2-210ENST00000474947 OSCARQ8IYS5 282 aa32.05■■■□□ 2.72
TFR2-210ENST00000474947 CFTRP13569 1480 aa31.96■■■□□ 2.71
TFR2-210ENST00000474947 URB2Q14146 1524 aaKnown RBP31.83■■■□□ 2.69
TFR2-210ENST00000474947 RSF1Q96T23 1441 aaPredicted RBP31.78■■■□□ 2.68
TFR2-210ENST00000474947 TOP2AP11388 1531 aaKnown RBP31.76■■■□□ 2.68
TFR2-210ENST00000474947 RIMBP3CA6NJZ7 1639 aa31.59■■■□□ 2.65
TFR2-210ENST00000474947 RIMBP3BA6NNM3 1639 aa31.59■■■□□ 2.65
TFR2-210ENST00000474947 RIMBP3Q9UFD9 1639 aa31.59■■■□□ 2.65
TFR2-210ENST00000474947 PRDM2Q13029 1718 aa31.55■■■□□ 2.64
TFR2-210ENST00000474947 IFT140Q96RY7 1462 aa31.55■■■□□ 2.64
TFR2-210ENST00000474947 ZNF608Q9ULD9 1512 aaPredicted RBP31.53■■■□□ 2.64
TFR2-210ENST00000474947 ARHGEF11O15085 1522 aa31.45■■■□□ 2.62
TFR2-210ENST00000474947 CCDC88BA6NC98 1476 aa31.43■■■□□ 2.62
TFR2-210ENST00000474947 TOPBP1Q92547 1522 aa31.41■■■□□ 2.62
TFR2-210ENST00000474947 ABCC8Q09428 1581 aa31.35■■■□□ 2.61
TFR2-210ENST00000474947 CYB5RLQ6IPT4 315 aa31.34■■■□□ 2.61
TFR2-210ENST00000474947 EIF4G3O43432 1585 aaKnown RBP31.31■■■□□ 2.6
TFR2-210ENST00000474947 DNMBPQ6XZF7 1577 aa31.25■■■□□ 2.59
TFR2-210ENST00000474947 AQRO60306 1485 aaKnown RBP eCLIP31.22■■■□□ 2.597e-7■■■■■ 31.3
TFR2-210ENST00000474947 FBLN2P98095 1184 aa31.22■■■□□ 2.59
TFR2-210ENST00000474947 TRHP20396 242 aaPredicted RBP31.2■■■□□ 2.59
TFR2-210ENST00000474947 CHD1O14646 1710 aa31.18■■■□□ 2.58
TFR2-210ENST00000474947 TARBP1Q13395 1621 aaKnown RBP31.14■■■□□ 2.58
TFR2-210ENST00000474947 ARAP1Q96P48 1450 aa31.09■■■□□ 2.57
TFR2-210ENST00000474947 POLA1P09884 1462 aaPredicted RBP31.05■■■□□ 2.56
TFR2-210ENST00000474947 RAD54L2Q9Y4B4 1467 aa30.98■■■□□ 2.55
TFR2-210ENST00000474947 TDRD9Q8NDG6 1382 aaKnown RBP30.97■■■□□ 2.55
TFR2-210ENST00000474947 SOGA1O94964 1423 aa30.96■■■□□ 2.55
TFR2-210ENST00000474947 CHMP7Q8WUX9 453 aaPredicted RBP30.88■■■□□ 2.53
TFR2-210ENST00000474947 SNAPC4Q5SXM2 1469 aa30.86■■■□□ 2.53
TFR2-210ENST00000474947 FGD5Q6ZNL6 1462 aa30.8■■■□□ 2.52
TFR2-210ENST00000474947 WDR97A6NE52 1622 aa30.8■■■□□ 2.52
TFR2-210ENST00000474947 CLASP1Q7Z460 1538 aa30.79■■■□□ 2.52
TFR2-210ENST00000474947 SYNJ1O43426 1573 aa30.79■■■□□ 2.52
TFR2-210ENST00000474947 MAGI1Q96QZ7 1491 aaPredicted RBP30.76■■■□□ 2.51
TFR2-210ENST00000474947 GRIN2BQ13224 1484 aa30.73■■■□□ 2.51
TFR2-210ENST00000474947 AEBP2Q6ZN18 517 aaPredicted RBP30.69■■■□□ 2.5
TFR2-210ENST00000474947 CUX1P39880 1505 aa30.67■■■□□ 2.5
TFR2-210ENST00000474947 SYNJ2O15056 1496 aa30.67■■■□□ 2.5
TFR2-210ENST00000474947 GAPVD1Q14C86 1478 aa30.56■■■□□ 2.48
TFR2-210ENST00000474947 PBRM1Q86U86 1689 aa30.52■■■□□ 2.48
TFR2-210ENST00000474947 ABCA10Q8WWZ4 1543 aa30.41■■■□□ 2.46
TFR2-210ENST00000474947 ABCA5Q8WWZ7 1642 aa30.38■■■□□ 2.45
TFR2-210ENST00000474947 GRIN2AQ12879 1464 aa30.32■■■□□ 2.44
TFR2-210ENST00000474947 ERCC6L2Q5T890 1561 aa30.29■■■□□ 2.44
TFR2-210ENST00000474947 WRNQ14191 1432 aaPredicted RBP eCLIP30.25■■■□□ 2.43
TFR2-210ENST00000474947 CEP170Q5SW79 1584 aa30.23■■■□□ 2.43
TFR2-210ENST00000474947 NUP160Q12769 1436 aa30.21■■■□□ 2.43
TFR2-210ENST00000474947 ADAMTS12P58397 1594 aa30.21■■■□□ 2.43
TFR2-210ENST00000474947 FHAD1B1AJZ9 1412 aa30.15■■■□□ 2.42
TFR2-210ENST00000474947 SUPT5HO00267 1087 aaKnown RBP30.12■■■□□ 2.41
TFR2-210ENST00000474947 SHROOM2Q13796 1616 aa30.1■■■□□ 2.41
TFR2-210ENST00000474947 TOP2BQ02880 1626 aa30.05■■■□□ 2.4
TFR2-210ENST00000474947 BIVM-ERCC5R4GMW8 1640 aa30.04■■■□□ 2.4
TFR2-210ENST00000474947 ERICH3Q5RHP9 1530 aa30.02■■■□□ 2.4
TFR2-210ENST00000474947 PRG4Q92954 1404 aaPredicted RBP30.02■■■□□ 2.4
TFR2-210ENST00000474947 KIF13AQ9H1H9 1805 aa29.98■■■□□ 2.39
TFR2-210ENST00000474947 JPH4Q96JJ6 628 aa29.98■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms