RNA–Protein interactions for RNA: ENST00000474868.1

MKNK1-210, Transcript of MAP kinase interacting serine/threonine kinase 1, humanhuman

TSL 3

Gene MKNK1, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKNK1-210ENST00000474868 NISCHQ9Y2I1 1504 aa22.78■■□□□ 1.24
MKNK1-210ENST00000474868 AEBP2Q6ZN18 517 aaPredicted RBP22.62■■□□□ 1.21
MKNK1-210ENST00000474868 CHIC1Q5VXU3 224 aa21.83■■□□□ 1.09
MKNK1-210ENST00000474868 CCDC180Q9P1Z9 1646 aa20.09■□□□□ 0.81
MKNK1-210ENST00000474868 SENP3Q9H4L4 574 aaPredicted RBP19.38■□□□□ 0.69
MKNK1-210ENST00000474868 ABCC9O60706 1549 aa19.23■□□□□ 0.67
MKNK1-210ENST00000474868 PHF23Q9BUL5 403 aaPredicted RBP19.1■□□□□ 0.65
MKNK1-210ENST00000474868 ZCCHC6Q5VYS8 1495 aaKnown RBP19.07■□□□□ 0.64
MKNK1-210ENST00000474868 DCAF1Q9Y4B6 1507 aa18.85■□□□□ 0.61
MKNK1-210ENST00000474868 DCAF8L2P0C7V8 631 aa18.83■□□□□ 0.6
MKNK1-210ENST00000474868 MYO15BQ96JP2 1530 aa18.75■□□□□ 0.59
MKNK1-210ENST00000474868 NACADO15069 1562 aa18.75■□□□□ 0.59
MKNK1-210ENST00000474868 RB1CC1Q8TDY2 1594 aa18.68■□□□□ 0.58
MKNK1-210ENST00000474868 SCRIBQ14160 1630 aa18.38■□□□□ 0.53
MKNK1-210ENST00000474868 UNC13AQ9UPW8 1703 aa18.36■□□□□ 0.53
MKNK1-210ENST00000474868 SHROOM4Q9ULL8 1493 aa18.27■□□□□ 0.52
MKNK1-210ENST00000474868 BICRAQ9NZM4 1560 aa18.13■□□□□ 0.49
MKNK1-210ENST00000474868 PABPN1Q86U42 306 aaKnown RBP eCLIP18.02■□□□□ 0.48
MKNK1-210ENST00000474868 FOXD1Q16676 465 aa17.95■□□□□ 0.46
MKNK1-210ENST00000474868 CECR2Q9BXF3 1484 aa17.71■□□□□ 0.43
MKNK1-210ENST00000474868 PLPPR3Q6T4P5 718 aa17.62■□□□□ 0.41
MKNK1-210ENST00000474868 BAZ1AQ9NRL2 1556 aaPredicted RBP17.62■□□□□ 0.41
MKNK1-210ENST00000474868 SMARCA4P51532 1647 aa17.61■□□□□ 0.41
MKNK1-210ENST00000474868 EIF4G1Q04637 1599 aaKnown RBP17.59■□□□□ 0.41
MKNK1-210ENST00000474868 MROH2BQ7Z745 1585 aa17.58■□□□□ 0.41
MKNK1-210ENST00000474868 RSF1Q96T23 1441 aaPredicted RBP17.51■□□□□ 0.39
MKNK1-210ENST00000474868 WIZO95785 1651 aa17.45■□□□□ 0.38
MKNK1-210ENST00000474868 CC2D2AQ9P2K1 1620 aa17.43■□□□□ 0.38
MKNK1-210ENST00000474868 PEG3Q9GZU2 1588 aa17.4■□□□□ 0.38
MKNK1-210ENST00000474868 SUPT5HO00267 1087 aaKnown RBP17.39■□□□□ 0.37
MKNK1-210ENST00000474868 SMARCA2P51531 1590 aa17.37■□□□□ 0.37
MKNK1-210ENST00000474868 ATAD2BQ9ULI0 1458 aa17.37■□□□□ 0.37
MKNK1-210ENST00000474868 NCAPD3P42695 1498 aa17.28■□□□□ 0.36
MKNK1-210ENST00000474868 BAZ1BQ9UIG0 1483 aaKnown RBP17.25■□□□□ 0.35
MKNK1-210ENST00000474868 DNAJC5BQ9UF47 199 aa17.25■□□□□ 0.35
MKNK1-210ENST00000474868 TOP2AP11388 1531 aaKnown RBP17.25■□□□□ 0.35
MKNK1-210ENST00000474868 HMGXB3Q12766 1538 aa17.25■□□□□ 0.35
MKNK1-210ENST00000474868 CCDC88BA6NC98 1476 aa17.05■□□□□ 0.32
MKNK1-210ENST00000474868 PPP6R1Q9UPN7 881 aa16.94■□□□□ 0.3
MKNK1-210ENST00000474868 ADRA2BP18089 450 aa16.92■□□□□ 0.3
MKNK1-210ENST00000474868 PIAS4Q8N2W9 510 aaPredicted RBP16.87■□□□□ 0.29
MKNK1-210ENST00000474868 PRDM2Q13029 1718 aa16.8■□□□□ 0.28
MKNK1-210ENST00000474868 CFTRP13569 1480 aa16.8■□□□□ 0.28
MKNK1-210ENST00000474868 CADPSQ9ULU8 1353 aa16.79■□□□□ 0.28
MKNK1-210ENST00000474868 MSH5O43196 834 aa16.79■□□□□ 0.28
MKNK1-210ENST00000474868 NESP48681 1621 aa16.78■□□□□ 0.28
MKNK1-210ENST00000474868 LAMC3Q9Y6N6 1575 aa16.78■□□□□ 0.28
MKNK1-210ENST00000474868 KIF21AQ7Z4S6 1674 aa16.64■□□□□ 0.25
MKNK1-210ENST00000474868 FANCD2Q9BXW9 1451 aa16.62■□□□□ 0.25
MKNK1-210ENST00000474868 PDS5BQ9NTI5 1447 aa16.62■□□□□ 0.25
MKNK1-210ENST00000474868 ABCC8Q09428 1581 aa16.58■□□□□ 0.24
MKNK1-210ENST00000474868 CEP164Q9UPV0 1460 aa16.56■□□□□ 0.24
MKNK1-210ENST00000474868 ERCC6Q03468 1493 aa16.51■□□□□ 0.23
MKNK1-210ENST00000474868 WRNQ14191 1432 aaPredicted RBP eCLIP16.49■□□□□ 0.23
MKNK1-210ENST00000474868 SYNJ1O43426 1573 aa16.48■□□□□ 0.23
MKNK1-210ENST00000474868 CUX1P39880 1505 aa16.48■□□□□ 0.23
MKNK1-210ENST00000474868 BIVM-ERCC5R4GMW8 1640 aa16.46■□□□□ 0.23
MKNK1-210ENST00000474868 URB2Q14146 1524 aaKnown RBP16.45■□□□□ 0.22
MKNK1-210ENST00000474868 MRC2Q9UBG0 1479 aa16.45■□□□□ 0.22
MKNK1-210ENST00000474868 TOP2BQ02880 1626 aa16.45■□□□□ 0.22
MKNK1-210ENST00000474868 DNMBPQ6XZF7 1577 aa16.44■□□□□ 0.22
MKNK1-210ENST00000474868 THOC2Q8NI27 1593 aaKnown RBP16.44■□□□□ 0.22
MKNK1-210ENST00000474868 TOPBP1Q92547 1522 aa16.42■□□□□ 0.22
MKNK1-210ENST00000474868 TRIM41Q8WV44 630 aa16.39■□□□□ 0.21
MKNK1-210ENST00000474868 WDR62O43379 1518 aa16.39■□□□□ 0.21
MKNK1-210ENST00000474868 FGD5Q6ZNL6 1462 aa16.33■□□□□ 0.2
MKNK1-210ENST00000474868 POLA1P09884 1462 aaPredicted RBP16.3■□□□□ 0.2
MKNK1-210ENST00000474868 CUX2O14529 1486 aa16.25■□□□□ 0.19
MKNK1-210ENST00000474868 TARBP1Q13395 1621 aaKnown RBP16.24■□□□□ 0.19
MKNK1-210ENST00000474868 WDR97A6NE52 1622 aa16.23■□□□□ 0.19
MKNK1-210ENST00000474868 RAD54L2Q9Y4B4 1467 aa16.23■□□□□ 0.19
MKNK1-210ENST00000474868 SOGA1O94964 1423 aa16.23■□□□□ 0.19
MKNK1-210ENST00000474868 IFT140Q96RY7 1462 aa16.18■□□□□ 0.18
MKNK1-210ENST00000474868 ABCA10Q8WWZ4 1543 aa16.18■□□□□ 0.18
MKNK1-210ENST00000474868 RUSC2Q8N2Y8 1516 aa16.14■□□□□ 0.18
MKNK1-210ENST00000474868 ABCA5Q8WWZ7 1642 aa16.12■□□□□ 0.17
MKNK1-210ENST00000474868 KIF27Q86VH2 1401 aa16.11■□□□□ 0.17
MKNK1-210ENST00000474868 ZNF608Q9ULD9 1512 aaPredicted RBP16.1■□□□□ 0.17
MKNK1-210ENST00000474868 TDRD9Q8NDG6 1382 aaKnown RBP16.09■□□□□ 0.17
MKNK1-210ENST00000474868 EIF4G3O43432 1585 aaKnown RBP16.08■□□□□ 0.16
MKNK1-210ENST00000474868 FAM9AQ8IZU1 332 aaPredicted RBP16.07■□□□□ 0.16
MKNK1-210ENST00000474868 EEA1Q15075 1411 aa16.07■□□□□ 0.16
MKNK1-210ENST00000474868 PBRM1Q86U86 1689 aa16.07■□□□□ 0.16
MKNK1-210ENST00000474868 GAPVD1Q14C86 1478 aa16.06■□□□□ 0.16
MKNK1-210ENST00000474868 AQRO60306 1485 aaKnown RBP eCLIP16.05■□□□□ 0.167e-6■■□□□ 12.2
MKNK1-210ENST00000474868 IGF1RP08069 1367 aa16■□□□□ 0.15
MKNK1-210ENST00000474868 ERICH3Q5RHP9 1530 aa15.99■□□□□ 0.15
MKNK1-210ENST00000474868 GRIN2BQ13224 1484 aa15.99■□□□□ 0.15
MKNK1-210ENST00000474868 CSRNP3Q8WYN3 585 aa15.99■□□□□ 0.15
MKNK1-210ENST00000474868 CUL7Q14999 1698 aa15.96■□□□□ 0.15
MKNK1-210ENST00000474868 KIF21BO75037 1637 aa15.93■□□□□ 0.14
MKNK1-210ENST00000474868 ADAMTS12P58397 1594 aa15.92■□□□□ 0.14
MKNK1-210ENST00000474868 SNAPC4Q5SXM2 1469 aa15.92■□□□□ 0.14
MKNK1-210ENST00000474868 PRXQ9BXM0 1461 aa15.91■□□□□ 0.14
MKNK1-210ENST00000474868 CARMIL1Q5VZK9 1371 aa15.9■□□□□ 0.14
MKNK1-210ENST00000474868 MAGI1Q96QZ7 1491 aaPredicted RBP15.9■□□□□ 0.14
MKNK1-210ENST00000474868 FHAD1B1AJZ9 1412 aa15.87■□□□□ 0.13
MKNK1-210ENST00000474868 RAPGEF2Q9Y4G8 1499 aa15.86■□□□□ 0.13
MKNK1-210ENST00000474868 GOLGA3Q08378 1498 aa15.84■□□□□ 0.13
MKNK1-210ENST00000474868 EHMT2Q96KQ7 1210 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms