RNA–Protein interactions for RNA: ENST00000474805.5

TRIM13-207, Transcript of tripartite motif containing 13, humanhuman

TSL 5

Gene TRIM13, Length 403 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-207ENST00000474805 NISCHQ9Y2I1 1504 aa31.7■■■□□ 2.67
TRIM13-207ENST00000474805 ABCC9O60706 1549 aa29.09■■■□□ 2.25
TRIM13-207ENST00000474805 CCDC180Q9P1Z9 1646 aa28.62■■■□□ 2.17
TRIM13-207ENST00000474805 DNAJC5BQ9UF47 199 aa27.71■■■□□ 2.03
TRIM13-207ENST00000474805 RB1CC1Q8TDY2 1594 aa27.46■■□□□ 1.99
TRIM13-207ENST00000474805 NACADO15069 1562 aa27.15■■□□□ 1.94
TRIM13-207ENST00000474805 DCAF8L2P0C7V8 631 aa27.05■■□□□ 1.92
TRIM13-207ENST00000474805 PABPN1Q86U42 306 aaKnown RBP eCLIP27.05■■□□□ 1.92
TRIM13-207ENST00000474805 UNC13AQ9UPW8 1703 aa26.93■■□□□ 1.9
TRIM13-207ENST00000474805 BICRAQ9NZM4 1560 aa26.71■■□□□ 1.87
TRIM13-207ENST00000474805 MYO15BQ96JP2 1530 aa26.59■■□□□ 1.85
TRIM13-207ENST00000474805 CC2D2AQ9P2K1 1620 aa26.25■■□□□ 1.79
TRIM13-207ENST00000474805 CECR2Q9BXF3 1484 aa26.23■■□□□ 1.79
TRIM13-207ENST00000474805 SHROOM4Q9ULL8 1493 aa26.19■■□□□ 1.78
TRIM13-207ENST00000474805 ZCCHC6Q5VYS8 1495 aaKnown RBP26.16■■□□□ 1.78
TRIM13-207ENST00000474805 DCAF1Q9Y4B6 1507 aa26.11■■□□□ 1.77
TRIM13-207ENST00000474805 SCRIBQ14160 1630 aa26.1■■□□□ 1.77
TRIM13-207ENST00000474805 EIF4G1Q04637 1599 aaKnown RBP26.07■■□□□ 1.76
TRIM13-207ENST00000474805 DNAJC5Q9H3Z4 198 aa25.71■■□□□ 1.71
TRIM13-207ENST00000474805 CUX2O14529 1486 aa25.18■■□□□ 1.62
TRIM13-207ENST00000474805 ERCC6Q03468 1493 aa25.12■■□□□ 1.61
TRIM13-207ENST00000474805 NCAPD3P42695 1498 aa25.08■■□□□ 1.6
TRIM13-207ENST00000474805 ATAD2BQ9ULI0 1458 aa24.95■■□□□ 1.58
TRIM13-207ENST00000474805 NESP48681 1621 aa24.89■■□□□ 1.57
TRIM13-207ENST00000474805 SMARCA2P51531 1590 aa24.84■■□□□ 1.57
TRIM13-207ENST00000474805 SMARCA4P51532 1647 aa24.83■■□□□ 1.57
TRIM13-207ENST00000474805 HMGXB3Q12766 1538 aa24.83■■□□□ 1.57
TRIM13-207ENST00000474805 BAZ1BQ9UIG0 1483 aaKnown RBP24.69■■□□□ 1.54
TRIM13-207ENST00000474805 THOC2Q8NI27 1593 aaKnown RBP24.67■■□□□ 1.54
TRIM13-207ENST00000474805 BAZ1AQ9NRL2 1556 aaPredicted RBP24.63■■□□□ 1.53
TRIM13-207ENST00000474805 LAMC3Q9Y6N6 1575 aa24.59■■□□□ 1.53
TRIM13-207ENST00000474805 KIF21AQ7Z4S6 1674 aa24.56■■□□□ 1.52
TRIM13-207ENST00000474805 PEG3Q9GZU2 1588 aa24.56■■□□□ 1.52
TRIM13-207ENST00000474805 PDS5BQ9NTI5 1447 aa24.45■■□□□ 1.51
TRIM13-207ENST00000474805 TRIM41Q8WV44 630 aa24.45■■□□□ 1.5
TRIM13-207ENST00000474805 MROH2BQ7Z745 1585 aa24.45■■□□□ 1.5
TRIM13-207ENST00000474805 CADPSQ9ULU8 1353 aa24.3■■□□□ 1.48
TRIM13-207ENST00000474805 MRC2Q9UBG0 1479 aa24.27■■□□□ 1.48
TRIM13-207ENST00000474805 WDR62O43379 1518 aa24.22■■□□□ 1.47
TRIM13-207ENST00000474805 WIZO95785 1651 aa24.18■■□□□ 1.46
TRIM13-207ENST00000474805 CEP164Q9UPV0 1460 aa24.09■■□□□ 1.45
TRIM13-207ENST00000474805 FANCD2Q9BXW9 1451 aa24.04■■□□□ 1.44
TRIM13-207ENST00000474805 OSCARQ8IYS5 282 aa24.02■■□□□ 1.44
TRIM13-207ENST00000474805 CFTRP13569 1480 aa23.93■■□□□ 1.42
TRIM13-207ENST00000474805 URB2Q14146 1524 aaKnown RBP23.88■■□□□ 1.41
TRIM13-207ENST00000474805 RSF1Q96T23 1441 aaPredicted RBP23.77■■□□□ 1.4
TRIM13-207ENST00000474805 TOP2AP11388 1531 aaKnown RBP23.77■■□□□ 1.4
TRIM13-207ENST00000474805 RIMBP3CA6NJZ7 1639 aa23.76■■□□□ 1.39
TRIM13-207ENST00000474805 RIMBP3BA6NNM3 1639 aa23.76■■□□□ 1.39
TRIM13-207ENST00000474805 RIMBP3Q9UFD9 1639 aa23.76■■□□□ 1.39
TRIM13-207ENST00000474805 PRDM2Q13029 1718 aa23.7■■□□□ 1.39
TRIM13-207ENST00000474805 ZNF608Q9ULD9 1512 aaPredicted RBP23.67■■□□□ 1.38
TRIM13-207ENST00000474805 IFT140Q96RY7 1462 aa23.62■■□□□ 1.37
TRIM13-207ENST00000474805 ARHGEF11O15085 1522 aa23.61■■□□□ 1.37
TRIM13-207ENST00000474805 CCDC88BA6NC98 1476 aa23.54■■□□□ 1.36
TRIM13-207ENST00000474805 TOPBP1Q92547 1522 aa23.54■■□□□ 1.36
TRIM13-207ENST00000474805 CYB5RLQ6IPT4 315 aa23.52■■□□□ 1.36
TRIM13-207ENST00000474805 EIF4G3O43432 1585 aaKnown RBP23.5■■□□□ 1.35
TRIM13-207ENST00000474805 CHD1O14646 1710 aa23.46■■□□□ 1.35
TRIM13-207ENST00000474805 ABCC8Q09428 1581 aa23.43■■□□□ 1.34
TRIM13-207ENST00000474805 AQRO60306 1485 aaKnown RBP eCLIP23.41■■□□□ 1.346e-15■■■■■ 98.7
TRIM13-207ENST00000474805 DNMBPQ6XZF7 1577 aa23.4■■□□□ 1.34
TRIM13-207ENST00000474805 TRHP20396 242 aaPredicted RBP23.4■■□□□ 1.34
TRIM13-207ENST00000474805 TARBP1Q13395 1621 aaKnown RBP23.37■■□□□ 1.33
TRIM13-207ENST00000474805 FBLN2P98095 1184 aa23.37■■□□□ 1.33
TRIM13-207ENST00000474805 ARAP1Q96P48 1450 aa23.36■■□□□ 1.33
TRIM13-207ENST00000474805 POLA1P09884 1462 aaPredicted RBP23.27■■□□□ 1.32
TRIM13-207ENST00000474805 RAD54L2Q9Y4B4 1467 aa23.23■■□□□ 1.31
TRIM13-207ENST00000474805 TDRD9Q8NDG6 1382 aaKnown RBP23.2■■□□□ 1.3
TRIM13-207ENST00000474805 SOGA1O94964 1423 aa23.17■■□□□ 1.3
TRIM13-207ENST00000474805 SNAPC4Q5SXM2 1469 aa23.12■■□□□ 1.29
TRIM13-207ENST00000474805 CLASP1Q7Z460 1538 aa23.11■■□□□ 1.29
TRIM13-207ENST00000474805 CHMP7Q8WUX9 453 aaPredicted RBP23.09■■□□□ 1.29
TRIM13-207ENST00000474805 FGD5Q6ZNL6 1462 aa23.07■■□□□ 1.28
TRIM13-207ENST00000474805 SYNJ1O43426 1573 aa23.06■■□□□ 1.28
TRIM13-207ENST00000474805 WDR97A6NE52 1622 aa23.04■■□□□ 1.28
TRIM13-207ENST00000474805 AEBP2Q6ZN18 517 aaPredicted RBP23.02■■□□□ 1.28
TRIM13-207ENST00000474805 MAGI1Q96QZ7 1491 aaPredicted RBP23.02■■□□□ 1.28
TRIM13-207ENST00000474805 GRIN2BQ13224 1484 aa22.99■■□□□ 1.27
TRIM13-207ENST00000474805 CUX1P39880 1505 aa22.98■■□□□ 1.27
TRIM13-207ENST00000474805 SYNJ2O15056 1496 aa22.97■■□□□ 1.27
TRIM13-207ENST00000474805 PBRM1Q86U86 1689 aa22.93■■□□□ 1.26
TRIM13-207ENST00000474805 GAPVD1Q14C86 1478 aa22.91■■□□□ 1.26
TRIM13-207ENST00000474805 ERCC6L2Q5T890 1561 aa22.78■■□□□ 1.24
TRIM13-207ENST00000474805 ABCA5Q8WWZ7 1642 aa22.78■■□□□ 1.24
TRIM13-207ENST00000474805 ABCA10Q8WWZ4 1543 aa22.76■■□□□ 1.23
TRIM13-207ENST00000474805 GRIN2AQ12879 1464 aa22.7■■□□□ 1.22
TRIM13-207ENST00000474805 CEP170Q5SW79 1584 aa22.67■■□□□ 1.22
TRIM13-207ENST00000474805 ADAMTS12P58397 1594 aa22.63■■□□□ 1.21
TRIM13-207ENST00000474805 NUP160Q12769 1436 aa22.63■■□□□ 1.21
TRIM13-207ENST00000474805 SHROOM2Q13796 1616 aa22.6■■□□□ 1.21
TRIM13-207ENST00000474805 KIF13AQ9H1H9 1805 aa22.59■■□□□ 1.21
TRIM13-207ENST00000474805 WRNQ14191 1432 aaPredicted RBP eCLIP22.59■■□□□ 1.21
TRIM13-207ENST00000474805 FHAD1B1AJZ9 1412 aa22.54■■□□□ 1.2
TRIM13-207ENST00000474805 BIVM-ERCC5R4GMW8 1640 aa22.5■■□□□ 1.19
TRIM13-207ENST00000474805 TOP2BQ02880 1626 aa22.49■■□□□ 1.19
TRIM13-207ENST00000474805 SUPT5HO00267 1087 aaKnown RBP22.48■■□□□ 1.19
TRIM13-207ENST00000474805 PRG4Q92954 1404 aaPredicted RBP22.48■■□□□ 1.19
TRIM13-207ENST00000474805 ERICH3Q5RHP9 1530 aa22.46■■□□□ 1.19
TRIM13-207ENST00000474805 JPH4Q96JJ6 628 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms