RNA–Protein interactions for RNA: ENST00000474490.1

RBP1-202, Transcript of retinol binding protein 1, humanhuman

TSL 2

Gene RBP1, Length 462 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBP1-202ENST00000474490 NISCHQ9Y2I1 1504 aa28.99■■■□□ 2.23
RBP1-202ENST00000474490 ABCC9O60706 1549 aa26.09■■□□□ 1.77
RBP1-202ENST00000474490 CCDC180Q9P1Z9 1646 aa26.05■■□□□ 1.76
RBP1-202ENST00000474490 RB1CC1Q8TDY2 1594 aa24.83■■□□□ 1.57
RBP1-202ENST00000474490 NACADO15069 1562 aa24.65■■□□□ 1.54
RBP1-202ENST00000474490 DCAF8L2P0C7V8 631 aa24.5■■□□□ 1.51
RBP1-202ENST00000474490 DNAJC5BQ9UF47 199 aa24.5■■□□□ 1.51
RBP1-202ENST00000474490 MYO15BQ96JP2 1530 aa24.3■■□□□ 1.48
RBP1-202ENST00000474490 PABPN1Q86U42 306 aaKnown RBP eCLIP24.27■■□□□ 1.48
RBP1-202ENST00000474490 UNC13AQ9UPW8 1703 aa24.26■■□□□ 1.47
RBP1-202ENST00000474490 BICRAQ9NZM4 1560 aa24.08■■□□□ 1.44
RBP1-202ENST00000474490 ZCCHC6Q5VYS8 1495 aaKnown RBP24■■□□□ 1.43
RBP1-202ENST00000474490 DCAF1Q9Y4B6 1507 aa23.95■■□□□ 1.43
RBP1-202ENST00000474490 SHROOM4Q9ULL8 1493 aa23.78■■□□□ 1.4
RBP1-202ENST00000474490 SCRIBQ14160 1630 aa23.71■■□□□ 1.39
RBP1-202ENST00000474490 CC2D2AQ9P2K1 1620 aa23.57■■□□□ 1.36
RBP1-202ENST00000474490 CECR2Q9BXF3 1484 aa23.51■■□□□ 1.35
RBP1-202ENST00000474490 EIF4G1Q04637 1599 aaKnown RBP23.51■■□□□ 1.35
RBP1-202ENST00000474490 NCAPD3P42695 1498 aa22.74■■□□□ 1.23
RBP1-202ENST00000474490 ATAD2BQ9ULI0 1458 aa22.66■■□□□ 1.22
RBP1-202ENST00000474490 SMARCA4P51532 1647 aa22.62■■□□□ 1.21
RBP1-202ENST00000474490 SMARCA2P51531 1590 aa22.61■■□□□ 1.21
RBP1-202ENST00000474490 DNAJC5Q9H3Z4 198 aa22.58■■□□□ 1.21
RBP1-202ENST00000474490 HMGXB3Q12766 1538 aa22.57■■□□□ 1.2
RBP1-202ENST00000474490 ERCC6Q03468 1493 aa22.54■■□□□ 1.2
RBP1-202ENST00000474490 CUX2O14529 1486 aa22.53■■□□□ 1.2
RBP1-202ENST00000474490 BAZ1AQ9NRL2 1556 aaPredicted RBP22.51■■□□□ 1.19
RBP1-202ENST00000474490 BAZ1BQ9UIG0 1483 aaKnown RBP22.45■■□□□ 1.18
RBP1-202ENST00000474490 PEG3Q9GZU2 1588 aa22.42■■□□□ 1.18
RBP1-202ENST00000474490 NESP48681 1621 aa22.38■■□□□ 1.17
RBP1-202ENST00000474490 MROH2BQ7Z745 1585 aa22.32■■□□□ 1.16
RBP1-202ENST00000474490 LAMC3Q9Y6N6 1575 aa22.25■■□□□ 1.15
RBP1-202ENST00000474490 THOC2Q8NI27 1593 aaKnown RBP22.18■■□□□ 1.14
RBP1-202ENST00000474490 PDS5BQ9NTI5 1447 aa22.14■■□□□ 1.13
RBP1-202ENST00000474490 KIF21AQ7Z4S6 1674 aa22.11■■□□□ 1.13
RBP1-202ENST00000474490 WIZO95785 1651 aa22.05■■□□□ 1.12
RBP1-202ENST00000474490 CADPSQ9ULU8 1353 aa22.05■■□□□ 1.12
RBP1-202ENST00000474490 MRC2Q9UBG0 1479 aa21.92■■□□□ 1.1
RBP1-202ENST00000474490 WDR62O43379 1518 aa21.87■■□□□ 1.09
RBP1-202ENST00000474490 RSF1Q96T23 1441 aaPredicted RBP21.84■■□□□ 1.09
RBP1-202ENST00000474490 CEP164Q9UPV0 1460 aa21.83■■□□□ 1.08
RBP1-202ENST00000474490 FANCD2Q9BXW9 1451 aa21.79■■□□□ 1.08
RBP1-202ENST00000474490 CFTRP13569 1480 aa21.78■■□□□ 1.08
RBP1-202ENST00000474490 TOP2AP11388 1531 aaKnown RBP21.77■■□□□ 1.08
RBP1-202ENST00000474490 URB2Q14146 1524 aaKnown RBP21.6■■□□□ 1.05
RBP1-202ENST00000474490 PRDM2Q13029 1718 aa21.58■■□□□ 1.05
RBP1-202ENST00000474490 TRIM41Q8WV44 630 aa21.56■■□□□ 1.04
RBP1-202ENST00000474490 CCDC88BA6NC98 1476 aa21.53■■□□□ 1.04
RBP1-202ENST00000474490 OSCARQ8IYS5 282 aa21.51■■□□□ 1.03
RBP1-202ENST00000474490 IFT140Q96RY7 1462 aa21.39■■□□□ 1.02
RBP1-202ENST00000474490 TOPBP1Q92547 1522 aa21.37■■□□□ 1.01
RBP1-202ENST00000474490 ABCC8Q09428 1581 aa21.36■■□□□ 1.01
RBP1-202ENST00000474490 ZNF608Q9ULD9 1512 aaPredicted RBP21.34■■□□□ 1.01
RBP1-202ENST00000474490 DNMBPQ6XZF7 1577 aa21.3■■□□□ 1
RBP1-202ENST00000474490 EIF4G3O43432 1585 aaKnown RBP21.23■□□□□ 0.99
RBP1-202ENST00000474490 RIMBP3CA6NJZ7 1639 aa21.2■□□□□ 0.98
RBP1-202ENST00000474490 RIMBP3BA6NNM3 1639 aa21.2■□□□□ 0.98
RBP1-202ENST00000474490 RIMBP3Q9UFD9 1639 aa21.2■□□□□ 0.98
RBP1-202ENST00000474490 TARBP1Q13395 1621 aaKnown RBP21.19■□□□□ 0.98
RBP1-202ENST00000474490 AQRO60306 1485 aaKnown RBP eCLIP21.16■□□□□ 0.98
RBP1-202ENST00000474490 POLA1P09884 1462 aaPredicted RBP21.14■□□□□ 0.98
RBP1-202ENST00000474490 ARHGEF11O15085 1522 aa21.13■□□□□ 0.97
RBP1-202ENST00000474490 CHD1O14646 1710 aa21.09■□□□□ 0.97
RBP1-202ENST00000474490 RAD54L2Q9Y4B4 1467 aa21.07■□□□□ 0.96
RBP1-202ENST00000474490 SOGA1O94964 1423 aa21.06■□□□□ 0.96
RBP1-202ENST00000474490 FBLN2P98095 1184 aa21.04■□□□□ 0.96
RBP1-202ENST00000474490 TDRD9Q8NDG6 1382 aaKnown RBP21.01■□□□□ 0.95
RBP1-202ENST00000474490 FGD5Q6ZNL6 1462 aa21.01■□□□□ 0.95
RBP1-202ENST00000474490 WDR97A6NE52 1622 aa21■□□□□ 0.95
RBP1-202ENST00000474490 CYB5RLQ6IPT4 315 aa20.99■□□□□ 0.95
RBP1-202ENST00000474490 CUX1P39880 1505 aa20.98■□□□□ 0.95
RBP1-202ENST00000474490 SNAPC4Q5SXM2 1469 aa20.94■□□□□ 0.94
RBP1-202ENST00000474490 ARAP1Q96P48 1450 aa20.91■□□□□ 0.94
RBP1-202ENST00000474490 MAGI1Q96QZ7 1491 aaPredicted RBP20.9■□□□□ 0.94
RBP1-202ENST00000474490 CHMP7Q8WUX9 453 aaPredicted RBP20.89■□□□□ 0.93
RBP1-202ENST00000474490 GRIN2BQ13224 1484 aa20.88■□□□□ 0.93
RBP1-202ENST00000474490 SYNJ1O43426 1573 aa20.85■□□□□ 0.93
RBP1-202ENST00000474490 CLASP1Q7Z460 1538 aa20.84■□□□□ 0.93
RBP1-202ENST00000474490 SUPT5HO00267 1087 aaKnown RBP20.83■□□□□ 0.93
RBP1-202ENST00000474490 SYNJ2O15056 1496 aa20.82■□□□□ 0.92
RBP1-202ENST00000474490 GAPVD1Q14C86 1478 aa20.81■□□□□ 0.92
RBP1-202ENST00000474490 PBRM1Q86U86 1689 aa20.8■□□□□ 0.92
RBP1-202ENST00000474490 TRHP20396 242 aaPredicted RBP20.78■□□□□ 0.92
RBP1-202ENST00000474490 ABCA10Q8WWZ4 1543 aa20.78■□□□□ 0.92
RBP1-202ENST00000474490 ABCA5Q8WWZ7 1642 aa20.74■□□□□ 0.91
RBP1-202ENST00000474490 WRNQ14191 1432 aaPredicted RBP eCLIP20.69■□□□□ 0.9
RBP1-202ENST00000474490 TOP2BQ02880 1626 aa20.64■□□□□ 0.89
RBP1-202ENST00000474490 BIVM-ERCC5R4GMW8 1640 aa20.64■□□□□ 0.89
RBP1-202ENST00000474490 GRIN2AQ12879 1464 aa20.62■□□□□ 0.89
RBP1-202ENST00000474490 ADAMTS12P58397 1594 aa20.59■□□□□ 0.89
RBP1-202ENST00000474490 NUP160Q12769 1436 aa20.55■□□□□ 0.88
RBP1-202ENST00000474490 FHAD1B1AJZ9 1412 aa20.54■□□□□ 0.88
RBP1-202ENST00000474490 CEP170Q5SW79 1584 aa20.53■□□□□ 0.88
RBP1-202ENST00000474490 ERICH3Q5RHP9 1530 aa20.53■□□□□ 0.88
RBP1-202ENST00000474490 ERCC6L2Q5T890 1561 aa20.51■□□□□ 0.87
RBP1-202ENST00000474490 SHROOM2Q13796 1616 aa20.46■□□□□ 0.87
RBP1-202ENST00000474490 PRG4Q92954 1404 aaPredicted RBP20.36■□□□□ 0.85
RBP1-202ENST00000474490 JPH4Q96JJ6 628 aa20.35■□□□□ 0.85
RBP1-202ENST00000474490 RUSC2Q8N2Y8 1516 aa20.3■□□□□ 0.84
RBP1-202ENST00000474490 KIF27Q86VH2 1401 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms