RNA–Protein interactions for RNA: ENST00000474420.1

SEMA4C-205, Transcript of semaphorin 4C, humanhuman

TSL 2

Gene SEMA4C, Length 2,625 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4C-205ENST00000474420 NISCHQ9Y2I1 1504 aa37.3■■■■□ 3.56
SEMA4C-205ENST00000474420 SHROOM4Q9ULL8 1493 aa32.87■■■□□ 2.85
SEMA4C-205ENST00000474420 SUPT5HO00267 1087 aaKnown RBP32.51■■■□□ 2.79
SEMA4C-205ENST00000474420 HRCP23327 699 aa31.92■■■□□ 2.7
SEMA4C-205ENST00000474420 MYO15BQ96JP2 1530 aa31.91■■■□□ 2.7
SEMA4C-205ENST00000474420 CHIC1Q5VXU3 224 aa31.73■■■□□ 2.67
SEMA4C-205ENST00000474420 ZCCHC6Q5VYS8 1495 aaKnown RBP31.65■■■□□ 2.66
SEMA4C-205ENST00000474420 PCGF6Q9BYE7 350 aa31.64■■■□□ 2.66
SEMA4C-205ENST00000474420 PPARGC1BQ86YN6 1023 aaKnown RBP31.5■■■□□ 2.63
SEMA4C-205ENST00000474420 DCAF8L2P0C7V8 631 aa31.3■■■□□ 2.6
SEMA4C-205ENST00000474420 CCDC180Q9P1Z9 1646 aa31.11■■■□□ 2.57
SEMA4C-205ENST00000474420 LOC105371045A0A1W2PR82 267 aa31.07■■■□□ 2.56
SEMA4C-205ENST00000474420 DCAF1Q9Y4B6 1507 aa30.88■■■□□ 2.53
SEMA4C-205ENST00000474420 TRIM26Q12899 539 aaPredicted RBP30.6■■■□□ 2.49
SEMA4C-205ENST00000474420 FAM9AQ8IZU1 332 aaPredicted RBP30.11■■■□□ 2.41
SEMA4C-205ENST00000474420 EHMT2Q96KQ7 1210 aa30.08■■■□□ 2.41
SEMA4C-205ENST00000474420 ZEB1P37275 1124 aaPredicted RBP30.06■■■□□ 2.4
SEMA4C-205ENST00000474420 TRIM41Q8WV44 630 aa30.02■■■□□ 2.4
SEMA4C-205ENST00000474420 SCAF1Q9H7N4 1312 aaKnown RBP30.01■■■□□ 2.39
SEMA4C-205ENST00000474420 ABCC9O60706 1549 aa30■■■□□ 2.39
SEMA4C-205ENST00000474420 RSF1Q96T23 1441 aaPredicted RBP29.9■■■□□ 2.38
SEMA4C-205ENST00000474420 PELP1Q8IZL8 1130 aaKnown RBP29.78■■■□□ 2.36
SEMA4C-205ENST00000474420 RB1CC1Q8TDY2 1594 aa29.77■■■□□ 2.36
SEMA4C-205ENST00000474420 SCRIBQ14160 1630 aa29.74■■■□□ 2.35
SEMA4C-205ENST00000474420 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.53■■■□□ 2.32
SEMA4C-205ENST00000474420 NEUROD1Q13562 356 aa29.38■■■□□ 2.29
SEMA4C-205ENST00000474420 CCER1Q8TC90 406 aaPredicted RBP29.37■■■□□ 2.29
SEMA4C-205ENST00000474420 ACIN1Q9UKV3 1341 aaKnown RBP29.34■■■□□ 2.29
SEMA4C-205ENST00000474420 CECR2Q9BXF3 1484 aa29.3■■■□□ 2.28
SEMA4C-205ENST00000474420 TTBK1Q5TCY1 1321 aaPredicted RBP29.24■■■□□ 2.27
SEMA4C-205ENST00000474420 MROH2BQ7Z745 1585 aa29.19■■■□□ 2.26
SEMA4C-205ENST00000474420 DIEXFQ68CQ4 756 aaKnown RBP29.15■■■□□ 2.26
SEMA4C-205ENST00000474420 GTF3C3Q9Y5Q9 886 aa29.14■■■□□ 2.26
SEMA4C-205ENST00000474420 WIZO95785 1651 aa29.09■■■□□ 2.25
SEMA4C-205ENST00000474420 CENPBP07199 599 aaPredicted RBP28.95■■■□□ 2.23
SEMA4C-205ENST00000474420 EIF4G1Q04637 1599 aaKnown RBP28.81■■■□□ 2.2
SEMA4C-205ENST00000474420 ABCC8Q09428 1581 aa28.79■■■□□ 2.2
SEMA4C-205ENST00000474420 CCDC88BA6NC98 1476 aa28.77■■■□□ 2.2
SEMA4C-205ENST00000474420 CEP162Q5TB80 1403 aa28.75■■■□□ 2.19
SEMA4C-205ENST00000474420 YTHDC1Q96MU7 727 aaKnown RBP28.75■■■□□ 2.19
SEMA4C-205ENST00000474420 BAZ1AQ9NRL2 1556 aaPredicted RBP28.75■■■□□ 2.19
SEMA4C-205ENST00000474420 WRNQ14191 1432 aaPredicted RBP eCLIP28.71■■■□□ 2.19
SEMA4C-205ENST00000474420 NACADO15069 1562 aa28.68■■■□□ 2.18
SEMA4C-205ENST00000474420 ZNF316A6NFI3 1004 aaPredicted RBP28.67■■■□□ 2.18
SEMA4C-205ENST00000474420 SOGA1O94964 1423 aa28.66■■■□□ 2.18
SEMA4C-205ENST00000474420 UBTFP17480 764 aaKnown RBP28.56■■■□□ 2.16
SEMA4C-205ENST00000474420 RUSC2Q8N2Y8 1516 aa28.54■■■□□ 2.16
SEMA4C-205ENST00000474420 TNIKQ9UKE5 1360 aa28.53■■■□□ 2.16
SEMA4C-205ENST00000474420 MIER1Q8N108 512 aa28.51■■■□□ 2.15
SEMA4C-205ENST00000474420 HNRNPUL2Q1KMD3 747 aaKnown RBP28.46■■■□□ 2.15
SEMA4C-205ENST00000474420 CSRNP3Q8WYN3 585 aa28.45■■■□□ 2.15
SEMA4C-205ENST00000474420 TOP2AP11388 1531 aaKnown RBP28.42■■■□□ 2.14
SEMA4C-205ENST00000474420 SMARCA2P51531 1590 aa28.38■■■□□ 2.13
SEMA4C-205ENST00000474420 MYT1Q01538 1121 aa28.36■■■□□ 2.13
SEMA4C-205ENST00000474420 SMARCA4P51532 1647 aa28.26■■■□□ 2.11
SEMA4C-205ENST00000474420 GOLGA3Q08378 1498 aa28.24■■■□□ 2.11
SEMA4C-205ENST00000474420 EEA1Q15075 1411 aa28.21■■■□□ 2.11
SEMA4C-205ENST00000474420 RANGAP1P46060 587 aaPredicted RBP28.14■■■□□ 2.09
SEMA4C-205ENST00000474420 CLIP1P30622 1438 aa28.05■■■□□ 2.08
SEMA4C-205ENST00000474420 CEP164Q9UPV0 1460 aa27.98■■■□□ 2.07
SEMA4C-205ENST00000474420 APLP2Q06481 763 aa27.95■■■□□ 2.06
SEMA4C-205ENST00000474420 VPS8Q8N3P4 1428 aa27.94■■■□□ 2.06
SEMA4C-205ENST00000474420 SYNJ1O43426 1573 aa27.93■■■□□ 2.06
SEMA4C-205ENST00000474420 UNC13AQ9UPW8 1703 aa27.88■■■□□ 2.05
SEMA4C-205ENST00000474420 KIF21BO75037 1637 aa27.87■■■□□ 2.05
SEMA4C-205ENST00000474420 RAPGEF2Q9Y4G8 1499 aa27.87■■■□□ 2.05
SEMA4C-205ENST00000474420 PABPN1Q86U42 306 aaKnown RBP eCLIP27.85■■■□□ 2.05
SEMA4C-205ENST00000474420 SUPT16HQ9Y5B9 1047 aaKnown RBP27.84■■■□□ 2.05
SEMA4C-205ENST00000474420 DHX57Q6P158 1386 aaKnown RBP27.77■■■□□ 2.04
SEMA4C-205ENST00000474420 BAZ1BQ9UIG0 1483 aaKnown RBP27.68■■■□□ 2.02
SEMA4C-205ENST00000474420 KANK4Q5T7N3 995 aaPredicted RBP27.67■■■□□ 2.02
SEMA4C-205ENST00000474420 KCNH8Q96L42 1107 aa27.59■■■□□ 2.01
SEMA4C-205ENST00000474420 CLSPNQ9HAW4 1339 aa27.59■■■□□ 2.01
SEMA4C-205ENST00000474420 TSHZ2Q9NRE2 1034 aa27.58■■■□□ 2.01
SEMA4C-205ENST00000474420 ITGAEP38570 1179 aa27.51■■□□□ 1.99
SEMA4C-205ENST00000474420 ARAP1Q96P48 1450 aa27.51■■□□□ 1.99
SEMA4C-205ENST00000474420 BICRAQ9NZM4 1560 aa27.5■■□□□ 1.99
SEMA4C-205ENST00000474420 PEG3Q9GZU2 1588 aa27.49■■□□□ 1.99
SEMA4C-205ENST00000474420 BCANQ96GW7 911 aa27.45■■□□□ 1.98
SEMA4C-205ENST00000474420 ATAD2BQ9ULI0 1458 aa27.41■■□□□ 1.98
SEMA4C-205ENST00000474420 TOP2BQ02880 1626 aa27.37■■□□□ 1.97
SEMA4C-205ENST00000474420 RRBP1Q9P2E9 1410 aaKnown RBP27.36■■□□□ 1.97
SEMA4C-205ENST00000474420 PRXQ9BXM0 1461 aa27.34■■□□□ 1.97
SEMA4C-205ENST00000474420 ANP32EQ9BTT0 268 aa27.32■■□□□ 1.96
SEMA4C-205ENST00000474420 CCNB3Q8WWL7 1395 aa27.3■■□□□ 1.96
SEMA4C-205ENST00000474420 ERICH3Q5RHP9 1530 aa27.28■■□□□ 1.96
SEMA4C-205ENST00000474420 FKBP8Q14318 412 aa27.24■■□□□ 1.95
SEMA4C-205ENST00000474420 CUX2O14529 1486 aa27.23■■□□□ 1.95
SEMA4C-205ENST00000474420 DDX10Q13206 875 aaKnown RBP27.23■■□□□ 1.95
SEMA4C-205ENST00000474420 RAB3GAP2Q9H2M9 1393 aa27.23■■□□□ 1.95
SEMA4C-205ENST00000474420 MAPKBP1O60336 1514 aa27.19■■□□□ 1.94
SEMA4C-205ENST00000474420 BIVM-ERCC5R4GMW8 1640 aa27.19■■□□□ 1.94
SEMA4C-205ENST00000474420 SIN3AQ96ST3 1273 aa27.16■■□□□ 1.94
SEMA4C-205ENST00000474420 ARHGAP35Q9NRY4 1499 aa27.15■■□□□ 1.94
SEMA4C-205ENST00000474420 HIRIP3Q9BW71 556 aaPredicted RBP27.15■■□□□ 1.94
SEMA4C-205ENST00000474420 WDR97A6NE52 1622 aa27.09■■□□□ 1.93
SEMA4C-205ENST00000474420 CUX1P39880 1505 aa27.08■■□□□ 1.93
SEMA4C-205ENST00000474420 TRIM52Q96A61 297 aa27.06■■□□□ 1.92
SEMA4C-205ENST00000474420 KIF27Q86VH2 1401 aa27.05■■□□□ 1.92
SEMA4C-205ENST00000474420 FAM50AQ14320 339 aaKnown RBP27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms