RNA–Protein interactions for RNA: ENST00000474262.5

CDK5RAP2-210, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 2

Gene CDK5RAP2, Length 549 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-210ENST00000474262 NISCHQ9Y2I1 1504 aa21.03■□□□□ 0.96
CDK5RAP2-210ENST00000474262 CCDC180Q9P1Z9 1646 aa18.68■□□□□ 0.58
CDK5RAP2-210ENST00000474262 ABCC9O60706 1549 aa18■□□□□ 0.47
CDK5RAP2-210ENST00000474262 ZCCHC6Q5VYS8 1495 aaKnown RBP17.58■□□□□ 0.41
CDK5RAP2-210ENST00000474262 NACADO15069 1562 aa17.48■□□□□ 0.39
CDK5RAP2-210ENST00000474262 MYO15BQ96JP2 1530 aa17.46■□□□□ 0.39
CDK5RAP2-210ENST00000474262 RB1CC1Q8TDY2 1594 aa17.45■□□□□ 0.38
CDK5RAP2-210ENST00000474262 DCAF1Q9Y4B6 1507 aa17.45■□□□□ 0.38
CDK5RAP2-210ENST00000474262 DCAF8L2P0C7V8 631 aa17.37■□□□□ 0.37
CDK5RAP2-210ENST00000474262 UNC13AQ9UPW8 1703 aa17.08■□□□□ 0.32
CDK5RAP2-210ENST00000474262 SCRIBQ14160 1630 aa17■□□□□ 0.31
CDK5RAP2-210ENST00000474262 BICRAQ9NZM4 1560 aa16.9■□□□□ 0.3
CDK5RAP2-210ENST00000474262 SHROOM4Q9ULL8 1493 aa16.8■□□□□ 0.28
CDK5RAP2-210ENST00000474262 PABPN1Q86U42 306 aaKnown RBP eCLIP16.79■□□□□ 0.282e-6■□□□□ 9.6
CDK5RAP2-210ENST00000474262 EIF4G1Q04637 1599 aaKnown RBP16.45■□□□□ 0.22
CDK5RAP2-210ENST00000474262 CC2D2AQ9P2K1 1620 aa16.33■□□□□ 0.2
CDK5RAP2-210ENST00000474262 CECR2Q9BXF3 1484 aa16.32■□□□□ 0.2
CDK5RAP2-210ENST00000474262 BAZ1AQ9NRL2 1556 aaPredicted RBP16.31■□□□□ 0.2
CDK5RAP2-210ENST00000474262 DNAJC5BQ9UF47 199 aa16.31■□□□□ 0.2
CDK5RAP2-210ENST00000474262 SMARCA4P51532 1647 aa16.3■□□□□ 0.2
CDK5RAP2-210ENST00000474262 MROH2BQ7Z745 1585 aa16.2■□□□□ 0.18
CDK5RAP2-210ENST00000474262 PEG3Q9GZU2 1588 aa16.16■□□□□ 0.18
CDK5RAP2-210ENST00000474262 SMARCA2P51531 1590 aa16.15■□□□□ 0.18
CDK5RAP2-210ENST00000474262 ATAD2BQ9ULI0 1458 aa16.13■□□□□ 0.17
CDK5RAP2-210ENST00000474262 NCAPD3P42695 1498 aa16.1■□□□□ 0.17
CDK5RAP2-210ENST00000474262 HMGXB3Q12766 1538 aa16.08■□□□□ 0.16
CDK5RAP2-210ENST00000474262 RSF1Q96T23 1441 aaPredicted RBP16.07■□□□□ 0.16
CDK5RAP2-210ENST00000474262 WIZO95785 1651 aa16.04■□□□□ 0.16
CDK5RAP2-210ENST00000474262 BAZ1BQ9UIG0 1483 aaKnown RBP16.02■□□□□ 0.15
CDK5RAP2-210ENST00000474262 TOP2AP11388 1531 aaKnown RBP15.91■□□□□ 0.14
CDK5RAP2-210ENST00000474262 SUPT5HO00267 1087 aaKnown RBP15.73■□□□□ 0.11
CDK5RAP2-210ENST00000474262 LAMC3Q9Y6N6 1575 aa15.67■□□□□ 0.1
CDK5RAP2-210ENST00000474262 CCDC88BA6NC98 1476 aa15.67■□□□□ 0.1
CDK5RAP2-210ENST00000474262 NESP48681 1621 aa15.63■□□□□ 0.09
CDK5RAP2-210ENST00000474262 CADPSQ9ULU8 1353 aa15.62■□□□□ 0.09
CDK5RAP2-210ENST00000474262 CFTRP13569 1480 aa15.59■□□□□ 0.09
CDK5RAP2-210ENST00000474262 PRDM2Q13029 1718 aa15.57■□□□□ 0.08
CDK5RAP2-210ENST00000474262 PDS5BQ9NTI5 1447 aa15.52■□□□□ 0.08
CDK5RAP2-210ENST00000474262 ERCC6Q03468 1493 aa15.51■□□□□ 0.07
CDK5RAP2-210ENST00000474262 KIF21AQ7Z4S6 1674 aa15.51■□□□□ 0.07
CDK5RAP2-210ENST00000474262 FANCD2Q9BXW9 1451 aa15.46■□□□□ 0.06
CDK5RAP2-210ENST00000474262 CEP164Q9UPV0 1460 aa15.44■□□□□ 0.06
CDK5RAP2-210ENST00000474262 THOC2Q8NI27 1593 aaKnown RBP15.42■□□□□ 0.06
CDK5RAP2-210ENST00000474262 MRC2Q9UBG0 1479 aa15.38■□□□□ 0.05
CDK5RAP2-210ENST00000474262 WDR62O43379 1518 aa15.34■□□□□ 0.05
CDK5RAP2-210ENST00000474262 DNAJC5Q9H3Z4 198 aa15.32■□□□□ 0.04
CDK5RAP2-210ENST00000474262 CUX2O14529 1486 aa15.31■□□□□ 0.04
CDK5RAP2-210ENST00000474262 URB2Q14146 1524 aaKnown RBP15.29■□□□□ 0.04
CDK5RAP2-210ENST00000474262 ABCC8Q09428 1581 aa15.27■□□□□ 0.03
CDK5RAP2-210ENST00000474262 DNMBPQ6XZF7 1577 aa15.26■□□□□ 0.03
CDK5RAP2-210ENST00000474262 TOPBP1Q92547 1522 aa15.24■□□□□ 0.03
CDK5RAP2-210ENST00000474262 CUX1P39880 1505 aa15.2■□□□□ 0.02
CDK5RAP2-210ENST00000474262 WRNQ14191 1432 aaPredicted RBP eCLIP15.16■□□□□ 0.02
CDK5RAP2-210ENST00000474262 BIVM-ERCC5R4GMW8 1640 aa15.15■□□□□ 0.02
CDK5RAP2-210ENST00000474262 TOP2BQ02880 1626 aa15.14■□□□□ 0.01
CDK5RAP2-210ENST00000474262 SYNJ1O43426 1573 aa15.13■□□□□ 0.01
CDK5RAP2-210ENST00000474262 POLA1P09884 1462 aaPredicted RBP15.12■□□□□ 0.01
CDK5RAP2-210ENST00000474262 FGD5Q6ZNL6 1462 aa15.11■□□□□ 0.01
CDK5RAP2-210ENST00000474262 IFT140Q96RY7 1462 aa15.11■□□□□ 0.01
CDK5RAP2-210ENST00000474262 TARBP1Q13395 1621 aaKnown RBP15.08■□□□□ 0
CDK5RAP2-210ENST00000474262 WDR97A6NE52 1622 aa15.03■□□□□ -0
CDK5RAP2-210ENST00000474262 SOGA1O94964 1423 aa15.02■□□□□ -0
CDK5RAP2-210ENST00000474262 RAD54L2Q9Y4B4 1467 aa15.01□□□□□ -0.01
CDK5RAP2-210ENST00000474262 EIF4G3O43432 1585 aaKnown RBP14.99□□□□□ -0.01
CDK5RAP2-210ENST00000474262 ZNF608Q9ULD9 1512 aaPredicted RBP14.99□□□□□ -0.01
CDK5RAP2-210ENST00000474262 ABCA10Q8WWZ4 1543 aa14.98□□□□□ -0.01
CDK5RAP2-210ENST00000474262 ABCA5Q8WWZ7 1642 aa14.94□□□□□ -0.02
CDK5RAP2-210ENST00000474262 AQRO60306 1485 aaKnown RBP eCLIP14.91□□□□□ -0.021e-6■■■■□ 20.3
CDK5RAP2-210ENST00000474262 TDRD9Q8NDG6 1382 aaKnown RBP14.9□□□□□ -0.02
CDK5RAP2-210ENST00000474262 PBRM1Q86U86 1689 aa14.9□□□□□ -0.02
CDK5RAP2-210ENST00000474262 GAPVD1Q14C86 1478 aa14.89□□□□□ -0.03
CDK5RAP2-210ENST00000474262 TRIM41Q8WV44 630 aa14.87□□□□□ -0.03
CDK5RAP2-210ENST00000474262 GRIN2BQ13224 1484 aa14.86□□□□□ -0.03
CDK5RAP2-210ENST00000474262 KIF27Q86VH2 1401 aa14.83□□□□□ -0.04
CDK5RAP2-210ENST00000474262 MAGI1Q96QZ7 1491 aaPredicted RBP14.82□□□□□ -0.04
CDK5RAP2-210ENST00000474262 ERICH3Q5RHP9 1530 aa14.82□□□□□ -0.04
CDK5RAP2-210ENST00000474262 SNAPC4Q5SXM2 1469 aa14.82□□□□□ -0.04
CDK5RAP2-210ENST00000474262 CHIC1Q5VXU3 224 aa14.8□□□□□ -0.04
CDK5RAP2-210ENST00000474262 ADAMTS12P58397 1594 aa14.78□□□□□ -0.04
CDK5RAP2-210ENST00000474262 CHD1O14646 1710 aa14.77□□□□□ -0.05
CDK5RAP2-210ENST00000474262 CUL7Q14999 1698 aa14.75□□□□□ -0.05
CDK5RAP2-210ENST00000474262 SYNJ2O15056 1496 aa14.75□□□□□ -0.05
CDK5RAP2-210ENST00000474262 FHAD1B1AJZ9 1412 aa14.73□□□□□ -0.05
CDK5RAP2-210ENST00000474262 RUSC2Q8N2Y8 1516 aa14.71□□□□□ -0.05
CDK5RAP2-210ENST00000474262 IGF1RP08069 1367 aa14.71□□□□□ -0.06
CDK5RAP2-210ENST00000474262 EEA1Q15075 1411 aa14.69□□□□□ -0.06
CDK5RAP2-210ENST00000474262 GRIN2AQ12879 1464 aa14.68□□□□□ -0.06
CDK5RAP2-210ENST00000474262 CHMP7Q8WUX9 453 aaPredicted RBP14.66□□□□□ -0.06
CDK5RAP2-210ENST00000474262 FBLN2P98095 1184 aa14.65□□□□□ -0.06
CDK5RAP2-210ENST00000474262 CARMIL1Q5VZK9 1371 aa14.63□□□□□ -0.07
CDK5RAP2-210ENST00000474262 OSCARQ8IYS5 282 aa14.63□□□□□ -0.07
CDK5RAP2-210ENST00000474262 CLASP1Q7Z460 1538 aa14.61□□□□□ -0.07
CDK5RAP2-210ENST00000474262 NUP160Q12769 1436 aa14.61□□□□□ -0.07
CDK5RAP2-210ENST00000474262 CEP170Q5SW79 1584 aa14.6□□□□□ -0.07
CDK5RAP2-210ENST00000474262 PRXQ9BXM0 1461 aa14.6□□□□□ -0.07
CDK5RAP2-210ENST00000474262 RAPGEF2Q9Y4G8 1499 aa14.59□□□□□ -0.07
CDK5RAP2-210ENST00000474262 CSRNP3Q8WYN3 585 aa14.57□□□□□ -0.08
CDK5RAP2-210ENST00000474262 KIF21BO75037 1637 aa14.55□□□□□ -0.08
CDK5RAP2-210ENST00000474262 FAM9AQ8IZU1 332 aaPredicted RBP14.52□□□□□ -0.09
CDK5RAP2-210ENST00000474262 CTTNBP2Q8WZ74 1663 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms