RNA–Protein interactions for RNA: ENST00000473762.2

CEACAMP3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CEACAMP3, Length 1,548 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAMP3-201ENST00000473762 AEBP2Q6ZN18 517 aaPredicted RBP26.47■■□□□ 1.83
CEACAMP3-201ENST00000473762 CHIC1Q5VXU3 224 aa24.81■■□□□ 1.56
CEACAMP3-201ENST00000473762 SENP3Q9H4L4 574 aaPredicted RBP22.93■■□□□ 1.26
CEACAMP3-201ENST00000473762 POTEDQ86YR6 584 aa22.87■■□□□ 1.25
CEACAMP3-201ENST00000473762 PHF23Q9BUL5 403 aaPredicted RBP22.37■■□□□ 1.17
CEACAMP3-201ENST00000473762 FOXD1Q16676 465 aa21.49■■□□□ 1.03
CEACAMP3-201ENST00000473762 MSH5O43196 834 aa20.81■□□□□ 0.92
CEACAMP3-201ENST00000473762 PIAS4Q8N2W9 510 aaPredicted RBP19.69■□□□□ 0.74
CEACAMP3-201ENST00000473762 NISCHQ9Y2I1 1504 aa19.03■□□□□ 0.64
CEACAMP3-201ENST00000473762 PPP6R1Q9UPN7 881 aa18.85■□□□□ 0.61
CEACAMP3-201ENST00000473762 CACNB1Q02641 598 aaPredicted RBP18.74■□□□□ 0.59
CEACAMP3-201ENST00000473762 ADRA2BP18089 450 aa18.69■□□□□ 0.58
CEACAMP3-201ENST00000473762 PLPPR3Q6T4P5 718 aa18.26■□□□□ 0.51
CEACAMP3-201ENST00000473762 DMRT2Q9Y5R5 561 aa17.93■□□□□ 0.46
CEACAMP3-201ENST00000473762 MAPK8IP2Q13387 824 aaPredicted RBP17.62■□□□□ 0.41
CEACAMP3-201ENST00000473762 POTEHQ6S545 545 aa17.62■□□□□ 0.41
CEACAMP3-201ENST00000473762 RNF39Q9H2S5 420 aa17.56■□□□□ 0.4
CEACAMP3-201ENST00000473762 C1QBPQ07021 282 aaKnown RBP17.27■□□□□ 0.36
CEACAMP3-201ENST00000473762 SCAF1Q9H7N4 1312 aaKnown RBP17.26■□□□□ 0.35
CEACAMP3-201ENST00000473762 DCAF8L1A6NGE4 600 aa17.17■□□□□ 0.34
CEACAMP3-201ENST00000473762 CCDC180Q9P1Z9 1646 aa16.74■□□□□ 0.27
CEACAMP3-201ENST00000473762 HOXD11P31277 338 aaPredicted RBP16.68■□□□□ 0.26
CEACAMP3-201ENST00000473762 DNAJC5BQ9UF47 199 aa16.53■□□□□ 0.24
CEACAMP3-201ENST00000473762 RNF216Q9NWF9 866 aaPredicted RBP16.14■□□□□ 0.17
CEACAMP3-201ENST00000473762 ABCC9O60706 1549 aa16.04■□□□□ 0.16
CEACAMP3-201ENST00000473762 ZCCHC6Q5VYS8 1495 aaKnown RBP15.94■□□□□ 0.14
CEACAMP3-201ENST00000473762 DSG3P32926 999 aa15.91■□□□□ 0.14
CEACAMP3-201ENST00000473762 CNKSR2Q8WXI2 1034 aa15.88■□□□□ 0.13
CEACAMP3-201ENST00000473762 DCAF8L2P0C7V8 631 aa15.85■□□□□ 0.13
CEACAMP3-201ENST00000473762 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.84■□□□□ 0.13
CEACAMP3-201ENST00000473762 SP7Q8TDD2 431 aaPredicted RBP15.8■□□□□ 0.12
CEACAMP3-201ENST00000473762 PPP4R3CPQ6ZMV5 832 aa15.76■□□□□ 0.11
CEACAMP3-201ENST00000473762 DCAF1Q9Y4B6 1507 aa15.73■□□□□ 0.11
CEACAMP3-201ENST00000473762 NACADO15069 1562 aa15.63■□□□□ 0.09
CEACAMP3-201ENST00000473762 MYO15BQ96JP2 1530 aa15.63■□□□□ 0.09
CEACAMP3-201ENST00000473762 CAPN15O75808 1086 aa15.6■□□□□ 0.09
CEACAMP3-201ENST00000473762 RB1CC1Q8TDY2 1594 aa15.57■□□□□ 0.08
CEACAMP3-201ENST00000473762 SPINK5Q9NQ38 1064 aaPredicted RBP15.52■□□□□ 0.07
CEACAMP3-201ENST00000473762 CHRDL2Q6WN34 429 aa15.5■□□□□ 0.07
CEACAMP3-201ENST00000473762 SHROOM4Q9ULL8 1493 aa15.39■□□□□ 0.05
CEACAMP3-201ENST00000473762 SCRIBQ14160 1630 aa15.37■□□□□ 0.05
CEACAMP3-201ENST00000473762 U3KPZ7 1027 aaPredicted RBP15.31■□□□□ 0.04
CEACAMP3-201ENST00000473762 RBM42Q9BTD8 480 aaKnown RBP15.3■□□□□ 0.04
CEACAMP3-201ENST00000473762 UNC13AQ9UPW8 1703 aa15.27■□□□□ 0.04
CEACAMP3-201ENST00000473762 PLSCR2Q9NRY7 297 aa15.1■□□□□ 0.01
CEACAMP3-201ENST00000473762 BICRAQ9NZM4 1560 aa15.07■□□□□ 0
CEACAMP3-201ENST00000473762 PABPN1Q86U42 306 aaKnown RBP eCLIP15.07■□□□□ 0
CEACAMP3-201ENST00000473762 ABCB7O75027 752 aa15.04■□□□□ -0
CEACAMP3-201ENST00000473762 ZNF219Q9P2Y4 722 aaPredicted RBP14.97□□□□□ -0.01
CEACAMP3-201ENST00000473762 TRHP20396 242 aaPredicted RBP14.95□□□□□ -0.02
CEACAMP3-201ENST00000473762 HAX1O00165 279 aa14.93□□□□□ -0.02
CEACAMP3-201ENST00000473762 APLP2Q06481 763 aa14.87□□□□□ -0.03
CEACAMP3-201ENST00000473762 CECR2Q9BXF3 1484 aa14.8□□□□□ -0.04
CEACAMP3-201ENST00000473762 LHX8Q68G74 356 aa14.8□□□□□ -0.04
CEACAMP3-201ENST00000473762 PIP4P2Q8N4L2 257 aa14.79□□□□□ -0.04
CEACAMP3-201ENST00000473762 NCBP3Q53F19 620 aaKnown RBP14.76□□□□□ -0.05
CEACAMP3-201ENST00000473762 BAZ1AQ9NRL2 1556 aaPredicted RBP14.74□□□□□ -0.05
CEACAMP3-201ENST00000473762 SMARCA4P51532 1647 aa14.7□□□□□ -0.06
CEACAMP3-201ENST00000473762 MROH2BQ7Z745 1585 aa14.69□□□□□ -0.06
CEACAMP3-201ENST00000473762 SUPT5HO00267 1087 aaKnown RBP14.69□□□□□ -0.06
CEACAMP3-201ENST00000473762 RSF1Q96T23 1441 aaPredicted RBP14.67□□□□□ -0.06
CEACAMP3-201ENST00000473762 EIF4G1Q04637 1599 aaKnown RBP14.66□□□□□ -0.06
CEACAMP3-201ENST00000473762 AKT1S1Q96B36 256 aa14.61□□□□□ -0.07
CEACAMP3-201ENST00000473762 WIZO95785 1651 aa14.59□□□□□ -0.07
CEACAMP3-201ENST00000473762 EVX2Q03828 476 aa14.58□□□□□ -0.08
CEACAMP3-201ENST00000473762 PEG3Q9GZU2 1588 aa14.51□□□□□ -0.09
CEACAMP3-201ENST00000473762 CC2D2AQ9P2K1 1620 aa14.51□□□□□ -0.09
CEACAMP3-201ENST00000473762 SMARCA2P51531 1590 aa14.5□□□□□ -0.09
CEACAMP3-201ENST00000473762 FXR2P51116 673 aaKnown RBP eCLIP14.5□□□□□ -0.09
CEACAMP3-201ENST00000473762 ATAD2BQ9ULI0 1458 aa14.5□□□□□ -0.09
CEACAMP3-201ENST00000473762 NPM3O75607 178 aaKnown RBP14.46□□□□□ -0.1
CEACAMP3-201ENST00000473762 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.45□□□□□ -0.1
CEACAMP3-201ENST00000473762 HNRNPUL2Q1KMD3 747 aaKnown RBP14.45□□□□□ -0.1
CEACAMP3-201ENST00000473762 BAZ1BQ9UIG0 1483 aaKnown RBP14.43□□□□□ -0.1
CEACAMP3-201ENST00000473762 TOP2AP11388 1531 aaKnown RBP14.42□□□□□ -0.1
CEACAMP3-201ENST00000473762 REM2Q8IYK8 340 aaPredicted RBP14.41□□□□□ -0.1
CEACAMP3-201ENST00000473762 NCAPD3P42695 1498 aa14.4□□□□□ -0.1
CEACAMP3-201ENST00000473762 HMGXB3Q12766 1538 aa14.39□□□□□ -0.11
CEACAMP3-201ENST00000473762 SAMD1Q6SPF0 538 aaPredicted RBP14.26□□□□□ -0.13
CEACAMP3-201ENST00000473762 CCDC88BA6NC98 1476 aa14.25□□□□□ -0.13
CEACAMP3-201ENST00000473762 PITPNM1O00562 1244 aa14.25□□□□□ -0.13
CEACAMP3-201ENST00000473762 GABBR2O75899 941 aa14.24□□□□□ -0.13
CEACAMP3-201ENST00000473762 POLA2Q14181 598 aa14.21□□□□□ -0.13
CEACAMP3-201ENST00000473762 SLC4A2P04920 1241 aa14.2□□□□□ -0.14
CEACAMP3-201ENST00000473762 C19orf67A6NJJ6 358 aa14.09□□□□□ -0.15
CEACAMP3-201ENST00000473762 CADPSQ9ULU8 1353 aa14.03□□□□□ -0.16
CEACAMP3-201ENST00000473762 CFTRP13569 1480 aa14.03□□□□□ -0.16
CEACAMP3-201ENST00000473762 PCDH10Q9P2E7 1040 aa14□□□□□ -0.17
CEACAMP3-201ENST00000473762 PRDM2Q13029 1718 aa14□□□□□ -0.17
CEACAMP3-201ENST00000473762 POTEMA6NI47 508 aa14□□□□□ -0.17
CEACAMP3-201ENST00000473762 NESP48681 1621 aa13.99□□□□□ -0.17
CEACAMP3-201ENST00000473762 LAMC3Q9Y6N6 1575 aa13.99□□□□□ -0.17
CEACAMP3-201ENST00000473762 ZBTB12Q9Y330 459 aaPredicted RBP13.92□□□□□ -0.18
CEACAMP3-201ENST00000473762 ABCC8Q09428 1581 aa13.9□□□□□ -0.18
CEACAMP3-201ENST00000473762 POTEIP0CG38 1075 aa13.9□□□□□ -0.19
CEACAMP3-201ENST00000473762 POTEGQ6S5H5 508 aa13.9□□□□□ -0.19
CEACAMP3-201ENST00000473762 FANCD2Q9BXW9 1451 aa13.89□□□□□ -0.19
CEACAMP3-201ENST00000473762 PDS5BQ9NTI5 1447 aa13.88□□□□□ -0.19
CEACAMP3-201ENST00000473762 PRKAR2AP13861 404 aaKnown RBP13.87□□□□□ -0.19
CEACAMP3-201ENST00000473762 KIF21AQ7Z4S6 1674 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms