RNA–Protein interactions for RNA: ENST00000473724.1

SBF1-206, Transcript of SET binding factor 1, humanhuman

TSL 2

Gene SBF1, Length 446 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBF1-206ENST00000473724 NISCHQ9Y2I1 1504 aa32.91■■■□□ 2.86
SBF1-206ENST00000473724 CCDC180Q9P1Z9 1646 aa29.6■■■□□ 2.33
SBF1-206ENST00000473724 ABCC9O60706 1549 aa29.5■■■□□ 2.31
SBF1-206ENST00000473724 RB1CC1Q8TDY2 1594 aa28.14■■■□□ 2.1
SBF1-206ENST00000473724 NACADO15069 1562 aa27.95■■■□□ 2.07
SBF1-206ENST00000473724 DCAF8L2P0C7V8 631 aa27.69■■■□□ 2.02
SBF1-206ENST00000473724 DNAJC5BQ9UF47 199 aa27.68■■■□□ 2.02
SBF1-206ENST00000473724 MYO15BQ96JP2 1530 aa27.58■■■□□ 2.01
SBF1-206ENST00000473724 UNC13AQ9UPW8 1703 aa27.56■■■□□ 2
SBF1-206ENST00000473724 PABPN1Q86U42 306 aaKnown RBP eCLIP27.44■■□□□ 1.985e-7■■■■□ 23
SBF1-206ENST00000473724 BICRAQ9NZM4 1560 aa27.32■■□□□ 1.96
SBF1-206ENST00000473724 ZCCHC6Q5VYS8 1495 aaKnown RBP27.27■■□□□ 1.96
SBF1-206ENST00000473724 DCAF1Q9Y4B6 1507 aa27.22■■□□□ 1.95
SBF1-206ENST00000473724 SHROOM4Q9ULL8 1493 aa26.98■■□□□ 1.91
SBF1-206ENST00000473724 SCRIBQ14160 1630 aa26.9■■□□□ 1.9
SBF1-206ENST00000473724 CC2D2AQ9P2K1 1620 aa26.7■■□□□ 1.86
SBF1-206ENST00000473724 EIF4G1Q04637 1599 aaKnown RBP26.64■■□□□ 1.86
SBF1-206ENST00000473724 CECR2Q9BXF3 1484 aa26.6■■□□□ 1.85
SBF1-206ENST00000473724 NCAPD3P42695 1498 aa25.79■■□□□ 1.72
SBF1-206ENST00000473724 ATAD2BQ9ULI0 1458 aa25.69■■□□□ 1.7
SBF1-206ENST00000473724 SMARCA4P51532 1647 aa25.69■■□□□ 1.7
SBF1-206ENST00000473724 SMARCA2P51531 1590 aa25.65■■□□□ 1.7
SBF1-206ENST00000473724 HMGXB3Q12766 1538 aa25.61■■□□□ 1.69
SBF1-206ENST00000473724 BAZ1AQ9NRL2 1556 aaPredicted RBP25.56■■□□□ 1.68
SBF1-206ENST00000473724 CUX2O14529 1486 aa25.48■■□□□ 1.67
SBF1-206ENST00000473724 ERCC6Q03468 1493 aa25.48■■□□□ 1.67
SBF1-206ENST00000473724 DNAJC5Q9H3Z4 198 aa25.46■■□□□ 1.67
SBF1-206ENST00000473724 PEG3Q9GZU2 1588 aa25.46■■□□□ 1.67
SBF1-206ENST00000473724 BAZ1BQ9UIG0 1483 aaKnown RBP25.44■■□□□ 1.66
SBF1-206ENST00000473724 NESP48681 1621 aa25.35■■□□□ 1.65
SBF1-206ENST00000473724 MROH2BQ7Z745 1585 aa25.34■■□□□ 1.65
SBF1-206ENST00000473724 LAMC3Q9Y6N6 1575 aa25.22■■□□□ 1.63
SBF1-206ENST00000473724 THOC2Q8NI27 1593 aaKnown RBP25.14■■□□□ 1.62
SBF1-206ENST00000473724 KIF21AQ7Z4S6 1674 aa25.08■■□□□ 1.61
SBF1-206ENST00000473724 PDS5BQ9NTI5 1447 aa25.06■■□□□ 1.6
SBF1-206ENST00000473724 WIZO95785 1651 aa25.06■■□□□ 1.6
SBF1-206ENST00000473724 CADPSQ9ULU8 1353 aa24.98■■□□□ 1.59
SBF1-206ENST00000473724 MRC2Q9UBG0 1479 aa24.83■■□□□ 1.57
SBF1-206ENST00000473724 RSF1Q96T23 1441 aaPredicted RBP24.8■■□□□ 1.56
SBF1-206ENST00000473724 WDR62O43379 1518 aa24.79■■□□□ 1.56
SBF1-206ENST00000473724 TOP2AP11388 1531 aaKnown RBP24.74■■□□□ 1.55
SBF1-206ENST00000473724 CEP164Q9UPV0 1460 aa24.73■■□□□ 1.55
SBF1-206ENST00000473724 CFTRP13569 1480 aa24.71■■□□□ 1.55
SBF1-206ENST00000473724 FANCD2Q9BXW9 1451 aa24.7■■□□□ 1.54
SBF1-206ENST00000473724 PRDM2Q13029 1718 aa24.56■■□□□ 1.52
SBF1-206ENST00000473724 URB2Q14146 1524 aaKnown RBP24.5■■□□□ 1.51
SBF1-206ENST00000473724 CCDC88BA6NC98 1476 aa24.44■■□□□ 1.5
SBF1-206ENST00000473724 OSCARQ8IYS5 282 aa24.29■■□□□ 1.48
SBF1-206ENST00000473724 TRIM41Q8WV44 630 aa24.28■■□□□ 1.48
SBF1-206ENST00000473724 IFT140Q96RY7 1462 aa24.25■■□□□ 1.47
SBF1-206ENST00000473724 TOPBP1Q92547 1522 aa24.24■■□□□ 1.47
SBF1-206ENST00000473724 ABCC8Q09428 1581 aa24.21■■□□□ 1.47
SBF1-206ENST00000473724 ZNF608Q9ULD9 1512 aaPredicted RBP24.19■■□□□ 1.46
SBF1-206ENST00000473724 DNMBPQ6XZF7 1577 aa24.16■■□□□ 1.46
SBF1-206ENST00000473724 EIF4G3O43432 1585 aaKnown RBP24.08■■□□□ 1.45
SBF1-206ENST00000473724 TARBP1Q13395 1621 aaKnown RBP24.05■■□□□ 1.44
SBF1-206ENST00000473724 RIMBP3CA6NJZ7 1639 aa24.01■■□□□ 1.43
SBF1-206ENST00000473724 RIMBP3BA6NNM3 1639 aa24.01■■□□□ 1.43
SBF1-206ENST00000473724 RIMBP3Q9UFD9 1639 aa24.01■■□□□ 1.43
SBF1-206ENST00000473724 POLA1P09884 1462 aaPredicted RBP23.98■■□□□ 1.43
SBF1-206ENST00000473724 AQRO60306 1485 aaKnown RBP eCLIP23.96■■□□□ 1.43
SBF1-206ENST00000473724 CHD1O14646 1710 aa23.94■■□□□ 1.42
SBF1-206ENST00000473724 ARHGEF11O15085 1522 aa23.91■■□□□ 1.42
SBF1-206ENST00000473724 RAD54L2Q9Y4B4 1467 aa23.87■■□□□ 1.41
SBF1-206ENST00000473724 SOGA1O94964 1423 aa23.87■■□□□ 1.41
SBF1-206ENST00000473724 WDR97A6NE52 1622 aa23.84■■□□□ 1.41
SBF1-206ENST00000473724 FGD5Q6ZNL6 1462 aa23.82■■□□□ 1.4
SBF1-206ENST00000473724 CUX1P39880 1505 aa23.82■■□□□ 1.4
SBF1-206ENST00000473724 TDRD9Q8NDG6 1382 aaKnown RBP23.8■■□□□ 1.4
SBF1-206ENST00000473724 FBLN2P98095 1184 aa23.77■■□□□ 1.4
SBF1-206ENST00000473724 SNAPC4Q5SXM2 1469 aa23.72■■□□□ 1.39
SBF1-206ENST00000473724 MAGI1Q96QZ7 1491 aaPredicted RBP23.69■■□□□ 1.38
SBF1-206ENST00000473724 CYB5RLQ6IPT4 315 aa23.69■■□□□ 1.38
SBF1-206ENST00000473724 GRIN2BQ13224 1484 aa23.68■■□□□ 1.38
SBF1-206ENST00000473724 ARAP1Q96P48 1450 aa23.67■■□□□ 1.38
SBF1-206ENST00000473724 CLASP1Q7Z460 1538 aa23.64■■□□□ 1.38
SBF1-206ENST00000473724 SUPT5HO00267 1087 aaKnown RBP23.64■■□□□ 1.37
SBF1-206ENST00000473724 SYNJ1O43426 1573 aa23.63■■□□□ 1.37
SBF1-206ENST00000473724 PBRM1Q86U86 1689 aa23.63■■□□□ 1.37
SBF1-206ENST00000473724 CHMP7Q8WUX9 453 aaPredicted RBP23.62■■□□□ 1.37
SBF1-206ENST00000473724 SYNJ2O15056 1496 aa23.61■■□□□ 1.37
SBF1-206ENST00000473724 GAPVD1Q14C86 1478 aa23.59■■□□□ 1.37
SBF1-206ENST00000473724 ABCA10Q8WWZ4 1543 aa23.59■■□□□ 1.37
SBF1-206ENST00000473724 ABCA5Q8WWZ7 1642 aa23.56■■□□□ 1.36
SBF1-206ENST00000473724 WRNQ14191 1432 aaPredicted RBP eCLIP23.47■■□□□ 1.35
SBF1-206ENST00000473724 BIVM-ERCC5R4GMW8 1640 aa23.47■■□□□ 1.35
SBF1-206ENST00000473724 TOP2BQ02880 1626 aa23.46■■□□□ 1.35
SBF1-206ENST00000473724 TRHP20396 242 aaPredicted RBP23.42■■□□□ 1.34
SBF1-206ENST00000473724 ADAMTS12P58397 1594 aa23.38■■□□□ 1.33
SBF1-206ENST00000473724 GRIN2AQ12879 1464 aa23.36■■□□□ 1.33
SBF1-206ENST00000473724 NUP160Q12769 1436 aa23.3■■□□□ 1.32
SBF1-206ENST00000473724 CEP170Q5SW79 1584 aa23.3■■□□□ 1.32
SBF1-206ENST00000473724 ERICH3Q5RHP9 1530 aa23.29■■□□□ 1.32
SBF1-206ENST00000473724 FHAD1B1AJZ9 1412 aa23.29■■□□□ 1.32
SBF1-206ENST00000473724 ERCC6L2Q5T890 1561 aa23.24■■□□□ 1.31
SBF1-206ENST00000473724 SHROOM2Q13796 1616 aa23.23■■□□□ 1.31
SBF1-206ENST00000473724 PRG4Q92954 1404 aaPredicted RBP23.05■■□□□ 1.28
SBF1-206ENST00000473724 RUSC2Q8N2Y8 1516 aa23.04■■□□□ 1.28
SBF1-206ENST00000473724 JPH4Q96JJ6 628 aa23.04■■□□□ 1.28
SBF1-206ENST00000473724 CUL7Q14999 1698 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms