RNA–Protein interactions for RNA: ENST00000473662.1

AMMECR1-204, Transcript of Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1, humanhuman

TSL 3

Gene AMMECR1, Length 418 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMMECR1-204ENST00000473662 NISCHQ9Y2I1 1504 aa28.79■■■□□ 2.2
AMMECR1-204ENST00000473662 CCDC180Q9P1Z9 1646 aa25.44■■□□□ 1.66
AMMECR1-204ENST00000473662 ABCC9O60706 1549 aa24.71■■□□□ 1.55
AMMECR1-204ENST00000473662 AEBP2Q6ZN18 517 aaPredicted RBP24.39■■□□□ 1.49
AMMECR1-204ENST00000473662 ZCCHC6Q5VYS8 1495 aaKnown RBP24.04■■□□□ 1.44
AMMECR1-204ENST00000473662 DCAF8L2P0C7V8 631 aa23.98■■□□□ 1.43
AMMECR1-204ENST00000473662 NACADO15069 1562 aa23.85■■□□□ 1.41
AMMECR1-204ENST00000473662 RB1CC1Q8TDY2 1594 aa23.82■■□□□ 1.4
AMMECR1-204ENST00000473662 DCAF1Q9Y4B6 1507 aa23.79■■□□□ 1.4
AMMECR1-204ENST00000473662 MYO15BQ96JP2 1530 aa23.77■■□□□ 1.4
AMMECR1-204ENST00000473662 UNC13AQ9UPW8 1703 aa23.36■■□□□ 1.33
AMMECR1-204ENST00000473662 SCRIBQ14160 1630 aa23.31■■□□□ 1.32
AMMECR1-204ENST00000473662 CHIC1Q5VXU3 224 aa23.17■■□□□ 1.3
AMMECR1-204ENST00000473662 BICRAQ9NZM4 1560 aa23.16■■□□□ 1.3
AMMECR1-204ENST00000473662 PABPN1Q86U42 306 aaKnown RBP eCLIP23.16■■□□□ 1.3
AMMECR1-204ENST00000473662 SHROOM4Q9ULL8 1493 aa22.98■■□□□ 1.27
AMMECR1-204ENST00000473662 EIF4G1Q04637 1599 aaKnown RBP22.49■■□□□ 1.19
AMMECR1-204ENST00000473662 DNAJC5BQ9UF47 199 aa22.48■■□□□ 1.19
AMMECR1-204ENST00000473662 CECR2Q9BXF3 1484 aa22.46■■□□□ 1.19
AMMECR1-204ENST00000473662 CC2D2AQ9P2K1 1620 aa22.35■■□□□ 1.17
AMMECR1-204ENST00000473662 SMARCA4P51532 1647 aa22.29■■□□□ 1.16
AMMECR1-204ENST00000473662 BAZ1AQ9NRL2 1556 aaPredicted RBP22.27■■□□□ 1.16
AMMECR1-204ENST00000473662 MROH2BQ7Z745 1585 aa22.24■■□□□ 1.15
AMMECR1-204ENST00000473662 ATAD2BQ9ULI0 1458 aa22.1■■□□□ 1.13
AMMECR1-204ENST00000473662 RSF1Q96T23 1441 aaPredicted RBP22.06■■□□□ 1.12
AMMECR1-204ENST00000473662 SMARCA2P51531 1590 aa22.04■■□□□ 1.12
AMMECR1-204ENST00000473662 PEG3Q9GZU2 1588 aa22.04■■□□□ 1.12
AMMECR1-204ENST00000473662 NCAPD3P42695 1498 aa22.03■■□□□ 1.12
AMMECR1-204ENST00000473662 WIZO95785 1651 aa22.01■■□□□ 1.11
AMMECR1-204ENST00000473662 HMGXB3Q12766 1538 aa21.93■■□□□ 1.1
AMMECR1-204ENST00000473662 BAZ1BQ9UIG0 1483 aaKnown RBP21.91■■□□□ 1.1
AMMECR1-204ENST00000473662 TOP2AP11388 1531 aaKnown RBP21.75■■□□□ 1.07
AMMECR1-204ENST00000473662 SUPT5HO00267 1087 aaKnown RBP21.73■■□□□ 1.07
AMMECR1-204ENST00000473662 CCDC88BA6NC98 1476 aa21.52■■□□□ 1.04
AMMECR1-204ENST00000473662 NESP48681 1621 aa21.48■■□□□ 1.03
AMMECR1-204ENST00000473662 CADPSQ9ULU8 1353 aa21.4■■□□□ 1.02
AMMECR1-204ENST00000473662 LAMC3Q9Y6N6 1575 aa21.38■■□□□ 1.01
AMMECR1-204ENST00000473662 CFTRP13569 1480 aa21.33■■□□□ 1.01
AMMECR1-204ENST00000473662 PDS5BQ9NTI5 1447 aa21.22■□□□□ 0.99
AMMECR1-204ENST00000473662 ERCC6Q03468 1493 aa21.22■□□□□ 0.99
AMMECR1-204ENST00000473662 KIF21AQ7Z4S6 1674 aa21.21■□□□□ 0.99
AMMECR1-204ENST00000473662 PRDM2Q13029 1718 aa21.19■□□□□ 0.98
AMMECR1-204ENST00000473662 FANCD2Q9BXW9 1451 aa21.17■□□□□ 0.98
AMMECR1-204ENST00000473662 CEP164Q9UPV0 1460 aa21.1■□□□□ 0.97
AMMECR1-204ENST00000473662 THOC2Q8NI27 1593 aaKnown RBP21.06■□□□□ 0.96
AMMECR1-204ENST00000473662 MRC2Q9UBG0 1479 aa21.02■□□□□ 0.96
AMMECR1-204ENST00000473662 URB2Q14146 1524 aaKnown RBP20.97■□□□□ 0.95
AMMECR1-204ENST00000473662 WDR62O43379 1518 aa20.94■□□□□ 0.94
AMMECR1-204ENST00000473662 CUX2O14529 1486 aa20.88■□□□□ 0.93
AMMECR1-204ENST00000473662 TOPBP1Q92547 1522 aa20.87■□□□□ 0.93
AMMECR1-204ENST00000473662 DNMBPQ6XZF7 1577 aa20.85■□□□□ 0.93
AMMECR1-204ENST00000473662 ABCC8Q09428 1581 aa20.85■□□□□ 0.93
AMMECR1-204ENST00000473662 CUX1P39880 1505 aa20.83■□□□□ 0.93
AMMECR1-204ENST00000473662 SENP3Q9H4L4 574 aaPredicted RBP20.83■□□□□ 0.93
AMMECR1-204ENST00000473662 WRNQ14191 1432 aaPredicted RBP eCLIP20.77■□□□□ 0.91
AMMECR1-204ENST00000473662 SYNJ1O43426 1573 aa20.75■□□□□ 0.91
AMMECR1-204ENST00000473662 POLA1P09884 1462 aaPredicted RBP20.71■□□□□ 0.91
AMMECR1-204ENST00000473662 FGD5Q6ZNL6 1462 aa20.71■□□□□ 0.91
AMMECR1-204ENST00000473662 TOP2BQ02880 1626 aa20.7■□□□□ 0.9
AMMECR1-204ENST00000473662 BIVM-ERCC5R4GMW8 1640 aa20.69■□□□□ 0.9
AMMECR1-204ENST00000473662 RAD54L2Q9Y4B4 1467 aa20.65■□□□□ 0.9
AMMECR1-204ENST00000473662 IFT140Q96RY7 1462 aa20.64■□□□□ 0.89
AMMECR1-204ENST00000473662 TARBP1Q13395 1621 aaKnown RBP20.63■□□□□ 0.89
AMMECR1-204ENST00000473662 SOGA1O94964 1423 aa20.61■□□□□ 0.89
AMMECR1-204ENST00000473662 ZNF608Q9ULD9 1512 aaPredicted RBP20.59■□□□□ 0.89
AMMECR1-204ENST00000473662 PHF23Q9BUL5 403 aaPredicted RBP20.54■□□□□ 0.88
AMMECR1-204ENST00000473662 WDR97A6NE52 1622 aa20.53■□□□□ 0.88
AMMECR1-204ENST00000473662 TDRD9Q8NDG6 1382 aaKnown RBP20.5■□□□□ 0.87
AMMECR1-204ENST00000473662 AQRO60306 1485 aaKnown RBP eCLIP20.5■□□□□ 0.87
AMMECR1-204ENST00000473662 ABCA10Q8WWZ4 1543 aa20.49■□□□□ 0.87
AMMECR1-204ENST00000473662 EIF4G3O43432 1585 aaKnown RBP20.48■□□□□ 0.87
AMMECR1-204ENST00000473662 TRIM41Q8WV44 630 aa20.47■□□□□ 0.87
AMMECR1-204ENST00000473662 ABCA5Q8WWZ7 1642 aa20.41■□□□□ 0.86
AMMECR1-204ENST00000473662 GAPVD1Q14C86 1478 aa20.38■□□□□ 0.85
AMMECR1-204ENST00000473662 PBRM1Q86U86 1689 aa20.34■□□□□ 0.85
AMMECR1-204ENST00000473662 GRIN2BQ13224 1484 aa20.33■□□□□ 0.85
AMMECR1-204ENST00000473662 SNAPC4Q5SXM2 1469 aa20.3■□□□□ 0.84
AMMECR1-204ENST00000473662 KIF27Q86VH2 1401 aa20.29■□□□□ 0.84
AMMECR1-204ENST00000473662 RUSC2Q8N2Y8 1516 aa20.29■□□□□ 0.84
AMMECR1-204ENST00000473662 MAGI1Q96QZ7 1491 aaPredicted RBP20.24■□□□□ 0.83
AMMECR1-204ENST00000473662 ERICH3Q5RHP9 1530 aa20.23■□□□□ 0.83
AMMECR1-204ENST00000473662 IGF1RP08069 1367 aa20.21■□□□□ 0.83
AMMECR1-204ENST00000473662 CHD1O14646 1710 aa20.2■□□□□ 0.82
AMMECR1-204ENST00000473662 ADAMTS12P58397 1594 aa20.2■□□□□ 0.82
AMMECR1-204ENST00000473662 FBLN2P98095 1184 aa20.18■□□□□ 0.82
AMMECR1-204ENST00000473662 SYNJ2O15056 1496 aa20.17■□□□□ 0.82
AMMECR1-204ENST00000473662 FHAD1B1AJZ9 1412 aa20.14■□□□□ 0.81
AMMECR1-204ENST00000473662 CHMP7Q8WUX9 453 aaPredicted RBP20.14■□□□□ 0.81
AMMECR1-204ENST00000473662 CUL7Q14999 1698 aa20.1■□□□□ 0.81
AMMECR1-204ENST00000473662 FAM9AQ8IZU1 332 aaPredicted RBP20.1■□□□□ 0.81
AMMECR1-204ENST00000473662 CARMIL1Q5VZK9 1371 aa20.08■□□□□ 0.81
AMMECR1-204ENST00000473662 GRIN2AQ12879 1464 aa20.08■□□□□ 0.81
AMMECR1-204ENST00000473662 OSCARQ8IYS5 282 aa20.08■□□□□ 0.81
AMMECR1-204ENST00000473662 EEA1Q15075 1411 aa20.05■□□□□ 0.8
AMMECR1-204ENST00000473662 CSRNP3Q8WYN3 585 aa20.05■□□□□ 0.8
AMMECR1-204ENST00000473662 CEP170Q5SW79 1584 aa20■□□□□ 0.79
AMMECR1-204ENST00000473662 PRXQ9BXM0 1461 aa20■□□□□ 0.79
AMMECR1-204ENST00000473662 NUP160Q12769 1436 aa19.99■□□□□ 0.79
AMMECR1-204ENST00000473662 RAPGEF2Q9Y4G8 1499 aa19.99■□□□□ 0.79
AMMECR1-204ENST00000473662 CLASP1Q7Z460 1538 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms