RNA–Protein interactions for RNA: ENST00000473278.1

CCDC142-206, Transcript of coiled-coil domain containing 142, humanhuman

TSL 2

Gene CCDC142, Length 810 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-206ENST00000473278 NISCHQ9Y2I1 1504 aa30.74■■■□□ 2.51
CCDC142-206ENST00000473278 CCDC180Q9P1Z9 1646 aa27.49■■□□□ 1.99
CCDC142-206ENST00000473278 ABCC9O60706 1549 aa27.39■■□□□ 1.98
CCDC142-206ENST00000473278 RB1CC1Q8TDY2 1594 aa26.16■■□□□ 1.78
CCDC142-206ENST00000473278 NACADO15069 1562 aa26.04■■□□□ 1.76
CCDC142-206ENST00000473278 DCAF8L2P0C7V8 631 aa25.96■■□□□ 1.75
CCDC142-206ENST00000473278 MYO15BQ96JP2 1530 aa25.78■■□□□ 1.72
CCDC142-206ENST00000473278 DNAJC5BQ9UF47 199 aa25.64■■□□□ 1.7
CCDC142-206ENST00000473278 PABPN1Q86U42 306 aaKnown RBP eCLIP25.57■■□□□ 1.68
CCDC142-206ENST00000473278 ZCCHC6Q5VYS8 1495 aaKnown RBP25.48■■□□□ 1.67
CCDC142-206ENST00000473278 DCAF1Q9Y4B6 1507 aa25.46■■□□□ 1.67
CCDC142-206ENST00000473278 UNC13AQ9UPW8 1703 aa25.37■■□□□ 1.65
CCDC142-206ENST00000473278 BICRAQ9NZM4 1560 aa25.32■■□□□ 1.64
CCDC142-206ENST00000473278 SHROOM4Q9ULL8 1493 aa25.15■■□□□ 1.62
CCDC142-206ENST00000473278 SCRIBQ14160 1630 aa25■■□□□ 1.59
CCDC142-206ENST00000473278 CC2D2AQ9P2K1 1620 aa24.73■■□□□ 1.55
CCDC142-206ENST00000473278 EIF4G1Q04637 1599 aaKnown RBP24.73■■□□□ 1.55
CCDC142-206ENST00000473278 CECR2Q9BXF3 1484 aa24.72■■□□□ 1.55
CCDC142-206ENST00000473278 NCAPD3P42695 1498 aa24.08■■□□□ 1.45
CCDC142-206ENST00000473278 ATAD2BQ9ULI0 1458 aa23.97■■□□□ 1.43
CCDC142-206ENST00000473278 SMARCA2P51531 1590 aa23.92■■□□□ 1.42
CCDC142-206ENST00000473278 SMARCA4P51532 1647 aa23.9■■□□□ 1.42
CCDC142-206ENST00000473278 BAZ1AQ9NRL2 1556 aaPredicted RBP23.87■■□□□ 1.41
CCDC142-206ENST00000473278 HMGXB3Q12766 1538 aa23.84■■□□□ 1.41
CCDC142-206ENST00000473278 BAZ1BQ9UIG0 1483 aaKnown RBP23.74■■□□□ 1.39
CCDC142-206ENST00000473278 PEG3Q9GZU2 1588 aa23.73■■□□□ 1.39
CCDC142-206ENST00000473278 ERCC6Q03468 1493 aa23.69■■□□□ 1.38
CCDC142-206ENST00000473278 CUX2O14529 1486 aa23.64■■□□□ 1.38
CCDC142-206ENST00000473278 MROH2BQ7Z745 1585 aa23.64■■□□□ 1.37
CCDC142-206ENST00000473278 DNAJC5Q9H3Z4 198 aa23.56■■□□□ 1.36
CCDC142-206ENST00000473278 NESP48681 1621 aa23.53■■□□□ 1.36
CCDC142-206ENST00000473278 LAMC3Q9Y6N6 1575 aa23.45■■□□□ 1.34
CCDC142-206ENST00000473278 PDS5BQ9NTI5 1447 aa23.4■■□□□ 1.34
CCDC142-206ENST00000473278 CADPSQ9ULU8 1353 aa23.36■■□□□ 1.33
CCDC142-206ENST00000473278 WIZO95785 1651 aa23.3■■□□□ 1.32
CCDC142-206ENST00000473278 RSF1Q96T23 1441 aaPredicted RBP23.25■■□□□ 1.31
CCDC142-206ENST00000473278 THOC2Q8NI27 1593 aaKnown RBP23.25■■□□□ 1.31
CCDC142-206ENST00000473278 KIF21AQ7Z4S6 1674 aa23.16■■□□□ 1.3
CCDC142-206ENST00000473278 MRC2Q9UBG0 1479 aa23.11■■□□□ 1.29
CCDC142-206ENST00000473278 TOP2AP11388 1531 aaKnown RBP23.1■■□□□ 1.29
CCDC142-206ENST00000473278 CFTRP13569 1480 aa23.09■■□□□ 1.29
CCDC142-206ENST00000473278 CEP164Q9UPV0 1460 aa23.05■■□□□ 1.28
CCDC142-206ENST00000473278 WDR62O43379 1518 aa23.03■■□□□ 1.28
CCDC142-206ENST00000473278 FANCD2Q9BXW9 1451 aa23.03■■□□□ 1.28
CCDC142-206ENST00000473278 CCDC88BA6NC98 1476 aa22.85■■□□□ 1.25
CCDC142-206ENST00000473278 URB2Q14146 1524 aaKnown RBP22.79■■□□□ 1.24
CCDC142-206ENST00000473278 PRDM2Q13029 1718 aa22.68■■□□□ 1.22
CCDC142-206ENST00000473278 OSCARQ8IYS5 282 aa22.66■■□□□ 1.22
CCDC142-206ENST00000473278 ABCC8Q09428 1581 aa22.65■■□□□ 1.22
CCDC142-206ENST00000473278 IFT140Q96RY7 1462 aa22.62■■□□□ 1.21
CCDC142-206ENST00000473278 TOPBP1Q92547 1522 aa22.59■■□□□ 1.21
CCDC142-206ENST00000473278 DNMBPQ6XZF7 1577 aa22.5■■□□□ 1.19
CCDC142-206ENST00000473278 ZNF608Q9ULD9 1512 aaPredicted RBP22.49■■□□□ 1.19
CCDC142-206ENST00000473278 TRIM41Q8WV44 630 aa22.49■■□□□ 1.19
CCDC142-206ENST00000473278 POLA1P09884 1462 aaPredicted RBP22.37■■□□□ 1.17
CCDC142-206ENST00000473278 TARBP1Q13395 1621 aaKnown RBP22.34■■□□□ 1.17
CCDC142-206ENST00000473278 AQRO60306 1485 aaKnown RBP eCLIP22.34■■□□□ 1.178e-7■■■□□ 17.5
CCDC142-206ENST00000473278 EIF4G3O43432 1585 aaKnown RBP22.33■■□□□ 1.16
CCDC142-206ENST00000473278 SOGA1O94964 1423 aa22.32■■□□□ 1.16
CCDC142-206ENST00000473278 SUPT5HO00267 1087 aaKnown RBP22.31■■□□□ 1.16
CCDC142-206ENST00000473278 RAD54L2Q9Y4B4 1467 aa22.26■■□□□ 1.15
CCDC142-206ENST00000473278 TDRD9Q8NDG6 1382 aaKnown RBP22.25■■□□□ 1.15
CCDC142-206ENST00000473278 FGD5Q6ZNL6 1462 aa22.23■■□□□ 1.15
CCDC142-206ENST00000473278 FBLN2P98095 1184 aa22.22■■□□□ 1.15
CCDC142-206ENST00000473278 CUX1P39880 1505 aa22.2■■□□□ 1.14
CCDC142-206ENST00000473278 WDR97A6NE52 1622 aa22.2■■□□□ 1.14
CCDC142-206ENST00000473278 ARHGEF11O15085 1522 aa22.16■■□□□ 1.14
CCDC142-206ENST00000473278 RIMBP3CA6NJZ7 1639 aa22.16■■□□□ 1.14
CCDC142-206ENST00000473278 RIMBP3BA6NNM3 1639 aa22.16■■□□□ 1.14
CCDC142-206ENST00000473278 RIMBP3Q9UFD9 1639 aa22.16■■□□□ 1.14
CCDC142-206ENST00000473278 CHMP7Q8WUX9 453 aaPredicted RBP22.12■■□□□ 1.13
CCDC142-206ENST00000473278 GRIN2BQ13224 1484 aa22.11■■□□□ 1.13
CCDC142-206ENST00000473278 MAGI1Q96QZ7 1491 aaPredicted RBP22.1■■□□□ 1.13
CCDC142-206ENST00000473278 SNAPC4Q5SXM2 1469 aa22.09■■□□□ 1.13
CCDC142-206ENST00000473278 CHD1O14646 1710 aa22.08■■□□□ 1.12
CCDC142-206ENST00000473278 CYB5RLQ6IPT4 315 aa22.07■■□□□ 1.12
CCDC142-206ENST00000473278 GAPVD1Q14C86 1478 aa22.03■■□□□ 1.12
CCDC142-206ENST00000473278 ABCA10Q8WWZ4 1543 aa22.03■■□□□ 1.12
CCDC142-206ENST00000473278 SYNJ2O15056 1496 aa22.02■■□□□ 1.12
CCDC142-206ENST00000473278 WRNQ14191 1432 aaPredicted RBP eCLIP22.01■■□□□ 1.11
CCDC142-206ENST00000473278 SYNJ1O43426 1573 aa21.97■■□□□ 1.11
CCDC142-206ENST00000473278 CLASP1Q7Z460 1538 aa21.93■■□□□ 1.1
CCDC142-206ENST00000473278 ARAP1Q96P48 1450 aa21.93■■□□□ 1.1
CCDC142-206ENST00000473278 ABCA5Q8WWZ7 1642 aa21.9■■□□□ 1.1
CCDC142-206ENST00000473278 TOP2BQ02880 1626 aa21.89■■□□□ 1.09
CCDC142-206ENST00000473278 PBRM1Q86U86 1689 aa21.86■■□□□ 1.09
CCDC142-206ENST00000473278 BIVM-ERCC5R4GMW8 1640 aa21.85■■□□□ 1.09
CCDC142-206ENST00000473278 GRIN2AQ12879 1464 aa21.79■■□□□ 1.08
CCDC142-206ENST00000473278 TRHP20396 242 aaPredicted RBP21.79■■□□□ 1.08
CCDC142-206ENST00000473278 FHAD1B1AJZ9 1412 aa21.79■■□□□ 1.08
CCDC142-206ENST00000473278 ERICH3Q5RHP9 1530 aa21.75■■□□□ 1.07
CCDC142-206ENST00000473278 NUP160Q12769 1436 aa21.74■■□□□ 1.07
CCDC142-206ENST00000473278 ADAMTS12P58397 1594 aa21.73■■□□□ 1.07
CCDC142-206ENST00000473278 CEP170Q5SW79 1584 aa21.64■■□□□ 1.05
CCDC142-206ENST00000473278 JPH4Q96JJ6 628 aa21.58■■□□□ 1.05
CCDC142-206ENST00000473278 KIF27Q86VH2 1401 aa21.57■■□□□ 1.04
CCDC142-206ENST00000473278 SHROOM2Q13796 1616 aa21.55■■□□□ 1.04
CCDC142-206ENST00000473278 IGF1RP08069 1367 aa21.54■■□□□ 1.04
CCDC142-206ENST00000473278 ERCC6L2Q5T890 1561 aa21.53■■□□□ 1.04
CCDC142-206ENST00000473278 PRG4Q92954 1404 aaPredicted RBP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 158.2 ms