RNA–Protein interactions for RNA: ENST00000473240.5

GCA-207, Transcript of grancalcin, humanhuman

TSL 3

Gene GCA, Length 814 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-207ENST00000473240 NISCHQ9Y2I1 1504 aa16.1■□□□□ 0.17
GCA-207ENST00000473240 ABCC9O60706 1549 aa14.57□□□□□ -0.08
GCA-207ENST00000473240 CCDC180Q9P1Z9 1646 aa14.33□□□□□ -0.11
GCA-207ENST00000473240 DNAJC5BQ9UF47 199 aa13.86□□□□□ -0.19
GCA-207ENST00000473240 DCAF8L2P0C7V8 631 aa13.8□□□□□ -0.2
GCA-207ENST00000473240 RB1CC1Q8TDY2 1594 aa13.74□□□□□ -0.21
GCA-207ENST00000473240 PABPN1Q86U42 306 aaKnown RBP eCLIP13.66□□□□□ -0.22
GCA-207ENST00000473240 NACADO15069 1562 aa13.64□□□□□ -0.23
GCA-207ENST00000473240 UNC13AQ9UPW8 1703 aa13.42□□□□□ -0.26
GCA-207ENST00000473240 MYO15BQ96JP2 1530 aa13.41□□□□□ -0.26
GCA-207ENST00000473240 BICRAQ9NZM4 1560 aa13.4□□□□□ -0.26
GCA-207ENST00000473240 ZCCHC6Q5VYS8 1495 aaKnown RBP13.29□□□□□ -0.28
GCA-207ENST00000473240 DCAF1Q9Y4B6 1507 aa13.23□□□□□ -0.29
GCA-207ENST00000473240 SCRIBQ14160 1630 aa13.17□□□□□ -0.3
GCA-207ENST00000473240 CECR2Q9BXF3 1484 aa13.1□□□□□ -0.31
GCA-207ENST00000473240 CC2D2AQ9P2K1 1620 aa13.1□□□□□ -0.31
GCA-207ENST00000473240 SHROOM4Q9ULL8 1493 aa13.08□□□□□ -0.32
GCA-207ENST00000473240 EIF4G1Q04637 1599 aaKnown RBP13.05□□□□□ -0.32
GCA-207ENST00000473240 DNAJC5Q9H3Z4 198 aa12.69□□□□□ -0.38
GCA-207ENST00000473240 NCAPD3P42695 1498 aa12.65□□□□□ -0.38
GCA-207ENST00000473240 ATAD2BQ9ULI0 1458 aa12.62□□□□□ -0.39
GCA-207ENST00000473240 ERCC6Q03468 1493 aa12.53□□□□□ -0.4
GCA-207ENST00000473240 SMARCA4P51532 1647 aa12.53□□□□□ -0.4
GCA-207ENST00000473240 NESP48681 1621 aa12.51□□□□□ -0.41
GCA-207ENST00000473240 SMARCA2P51531 1590 aa12.51□□□□□ -0.41
GCA-207ENST00000473240 CUX2O14529 1486 aa12.48□□□□□ -0.41
GCA-207ENST00000473240 HMGXB3Q12766 1538 aa12.47□□□□□ -0.41
GCA-207ENST00000473240 BAZ1BQ9UIG0 1483 aaKnown RBP12.46□□□□□ -0.42
GCA-207ENST00000473240 BAZ1AQ9NRL2 1556 aaPredicted RBP12.45□□□□□ -0.42
GCA-207ENST00000473240 MROH2BQ7Z745 1585 aa12.44□□□□□ -0.42
GCA-207ENST00000473240 PEG3Q9GZU2 1588 aa12.39□□□□□ -0.43
GCA-207ENST00000473240 LAMC3Q9Y6N6 1575 aa12.3□□□□□ -0.44
GCA-207ENST00000473240 CADPSQ9ULU8 1353 aa12.3□□□□□ -0.44
GCA-207ENST00000473240 PDS5BQ9NTI5 1447 aa12.29□□□□□ -0.44
GCA-207ENST00000473240 THOC2Q8NI27 1593 aaKnown RBP12.28□□□□□ -0.44
GCA-207ENST00000473240 WIZO95785 1651 aa12.27□□□□□ -0.45
GCA-207ENST00000473240 KIF21AQ7Z4S6 1674 aa12.25□□□□□ -0.45
GCA-207ENST00000473240 RSF1Q96T23 1441 aaPredicted RBP12.19□□□□□ -0.46
GCA-207ENST00000473240 MRC2Q9UBG0 1479 aa12.17□□□□□ -0.46
GCA-207ENST00000473240 TRIM41Q8WV44 630 aa12.14□□□□□ -0.47
GCA-207ENST00000473240 FANCD2Q9BXW9 1451 aa12.13□□□□□ -0.47
GCA-207ENST00000473240 WDR62O43379 1518 aa12.12□□□□□ -0.47
GCA-207ENST00000473240 CFTRP13569 1480 aa12.11□□□□□ -0.47
GCA-207ENST00000473240 CEP164Q9UPV0 1460 aa12.11□□□□□ -0.47
GCA-207ENST00000473240 TOP2AP11388 1531 aaKnown RBP12.06□□□□□ -0.48
GCA-207ENST00000473240 OSCARQ8IYS5 282 aa12.05□□□□□ -0.48
GCA-207ENST00000473240 URB2Q14146 1524 aaKnown RBP12.04□□□□□ -0.48
GCA-207ENST00000473240 CCDC88BA6NC98 1476 aa12.02□□□□□ -0.49
GCA-207ENST00000473240 ZNF608Q9ULD9 1512 aaPredicted RBP11.93□□□□□ -0.5
GCA-207ENST00000473240 TOPBP1Q92547 1522 aa11.89□□□□□ -0.51
GCA-207ENST00000473240 IFT140Q96RY7 1462 aa11.88□□□□□ -0.51
GCA-207ENST00000473240 AQRO60306 1485 aaKnown RBP eCLIP11.84□□□□□ -0.51
GCA-207ENST00000473240 PRDM2Q13029 1718 aa11.83□□□□□ -0.52
GCA-207ENST00000473240 FBLN2P98095 1184 aa11.82□□□□□ -0.52
GCA-207ENST00000473240 ABCC8Q09428 1581 aa11.82□□□□□ -0.52
GCA-207ENST00000473240 CYB5RLQ6IPT4 315 aa11.81□□□□□ -0.52
GCA-207ENST00000473240 DNMBPQ6XZF7 1577 aa11.79□□□□□ -0.52
GCA-207ENST00000473240 RIMBP3CA6NJZ7 1639 aa11.78□□□□□ -0.52
GCA-207ENST00000473240 RIMBP3BA6NNM3 1639 aa11.78□□□□□ -0.52
GCA-207ENST00000473240 RIMBP3Q9UFD9 1639 aa11.78□□□□□ -0.52
GCA-207ENST00000473240 RAD54L2Q9Y4B4 1467 aa11.78□□□□□ -0.52
GCA-207ENST00000473240 TDRD9Q8NDG6 1382 aaKnown RBP11.78□□□□□ -0.52
GCA-207ENST00000473240 SOGA1O94964 1423 aa11.77□□□□□ -0.53
GCA-207ENST00000473240 POLA1P09884 1462 aaPredicted RBP11.76□□□□□ -0.53
GCA-207ENST00000473240 ARHGEF11O15085 1522 aa11.76□□□□□ -0.53
GCA-207ENST00000473240 EIF4G3O43432 1585 aaKnown RBP11.75□□□□□ -0.53
GCA-207ENST00000473240 TARBP1Q13395 1621 aaKnown RBP11.75□□□□□ -0.53
GCA-207ENST00000473240 SUPT5HO00267 1087 aaKnown RBP11.72□□□□□ -0.53
GCA-207ENST00000473240 CHMP7Q8WUX9 453 aaPredicted RBP11.69□□□□□ -0.54
GCA-207ENST00000473240 FGD5Q6ZNL6 1462 aa11.69□□□□□ -0.54
GCA-207ENST00000473240 TRHP20396 242 aaPredicted RBP11.68□□□□□ -0.54
GCA-207ENST00000473240 CHD1O14646 1710 aa11.68□□□□□ -0.54
GCA-207ENST00000473240 CUX1P39880 1505 aa11.67□□□□□ -0.54
GCA-207ENST00000473240 ARAP1Q96P48 1450 aa11.65□□□□□ -0.54
GCA-207ENST00000473240 SNAPC4Q5SXM2 1469 aa11.64□□□□□ -0.55
GCA-207ENST00000473240 GRIN2BQ13224 1484 aa11.6□□□□□ -0.55
GCA-207ENST00000473240 GAPVD1Q14C86 1478 aa11.57□□□□□ -0.56
GCA-207ENST00000473240 MAGI1Q96QZ7 1491 aaPredicted RBP11.57□□□□□ -0.56
GCA-207ENST00000473240 CLASP1Q7Z460 1538 aa11.56□□□□□ -0.56
GCA-207ENST00000473240 SYNJ2O15056 1496 aa11.56□□□□□ -0.56
GCA-207ENST00000473240 SYNJ1O43426 1573 aa11.54□□□□□ -0.56
GCA-207ENST00000473240 WDR97A6NE52 1622 aa11.53□□□□□ -0.56
GCA-207ENST00000473240 ABCA10Q8WWZ4 1543 aa11.53□□□□□ -0.56
GCA-207ENST00000473240 WRNQ14191 1432 aaPredicted RBP eCLIP11.5□□□□□ -0.57
GCA-207ENST00000473240 PBRM1Q86U86 1689 aa11.47□□□□□ -0.57
GCA-207ENST00000473240 ABCA5Q8WWZ7 1642 aa11.47□□□□□ -0.57
GCA-207ENST00000473240 ERCC6L2Q5T890 1561 aa11.45□□□□□ -0.58
GCA-207ENST00000473240 GRIN2AQ12879 1464 aa11.45□□□□□ -0.58
GCA-207ENST00000473240 JPH4Q96JJ6 628 aa11.42□□□□□ -0.58
GCA-207ENST00000473240 FHAD1B1AJZ9 1412 aa11.42□□□□□ -0.58
GCA-207ENST00000473240 NUP160Q12769 1436 aa11.42□□□□□ -0.58
GCA-207ENST00000473240 TOP2BQ02880 1626 aa11.42□□□□□ -0.58
GCA-207ENST00000473240 CEP170Q5SW79 1584 aa11.41□□□□□ -0.58
GCA-207ENST00000473240 BIVM-ERCC5R4GMW8 1640 aa11.39□□□□□ -0.59
GCA-207ENST00000473240 ADAMTS12P58397 1594 aa11.38□□□□□ -0.59
GCA-207ENST00000473240 PRG4Q92954 1404 aaPredicted RBP11.36□□□□□ -0.59
GCA-207ENST00000473240 ERICH3Q5RHP9 1530 aa11.35□□□□□ -0.59
GCA-207ENST00000473240 AEBP2Q6ZN18 517 aaPredicted RBP11.34□□□□□ -0.59
GCA-207ENST00000473240 IGF1RP08069 1367 aa11.33□□□□□ -0.6
GCA-207ENST00000473240 SHROOM2Q13796 1616 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms