RNA–Protein interactions for RNA: ENST00000473049.1

ACTN4P2-201, Transcript of actinin alpha 4 pseudogene 2, humanhuman

BASIC

Gene ACTN4P2, Length 1,892 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4P2-201ENST00000473049 NISCHQ9Y2I1 1504 aa23.21■■□□□ 1.31
ACTN4P2-201ENST00000473049 CCDC180Q9P1Z9 1646 aa20.54■□□□□ 0.88
ACTN4P2-201ENST00000473049 ABCC9O60706 1549 aa19.67■□□□□ 0.74
ACTN4P2-201ENST00000473049 ZCCHC6Q5VYS8 1495 aaKnown RBP19.39■□□□□ 0.69
ACTN4P2-201ENST00000473049 DCAF1Q9Y4B6 1507 aa19.29■□□□□ 0.68
ACTN4P2-201ENST00000473049 MYO15BQ96JP2 1530 aa19.27■□□□□ 0.68
ACTN4P2-201ENST00000473049 NACADO15069 1562 aa19.24■□□□□ 0.67
ACTN4P2-201ENST00000473049 RB1CC1Q8TDY2 1594 aa19.16■□□□□ 0.66
ACTN4P2-201ENST00000473049 DCAF8L2P0C7V8 631 aa19.16■□□□□ 0.66
ACTN4P2-201ENST00000473049 UNC13AQ9UPW8 1703 aa18.67■□□□□ 0.58
ACTN4P2-201ENST00000473049 SCRIBQ14160 1630 aa18.65■□□□□ 0.58
ACTN4P2-201ENST00000473049 BICRAQ9NZM4 1560 aa18.52■□□□□ 0.55
ACTN4P2-201ENST00000473049 SHROOM4Q9ULL8 1493 aa18.48■□□□□ 0.55
ACTN4P2-201ENST00000473049 PABPN1Q86U42 306 aaKnown RBP eCLIP18.41■□□□□ 0.54
ACTN4P2-201ENST00000473049 EIF4G1Q04637 1599 aaKnown RBP18.01■□□□□ 0.47
ACTN4P2-201ENST00000473049 BAZ1AQ9NRL2 1556 aaPredicted RBP17.98■□□□□ 0.47
ACTN4P2-201ENST00000473049 CECR2Q9BXF3 1484 aa17.97■□□□□ 0.47
ACTN4P2-201ENST00000473049 SMARCA4P51532 1647 aa17.93■□□□□ 0.46
ACTN4P2-201ENST00000473049 CC2D2AQ9P2K1 1620 aa17.85■□□□□ 0.45
ACTN4P2-201ENST00000473049 MROH2BQ7Z745 1585 aa17.85■□□□□ 0.45
ACTN4P2-201ENST00000473049 PEG3Q9GZU2 1588 aa17.8■□□□□ 0.44
ACTN4P2-201ENST00000473049 SMARCA2P51531 1590 aa17.79■□□□□ 0.44
ACTN4P2-201ENST00000473049 RSF1Q96T23 1441 aaPredicted RBP17.78■□□□□ 0.44
ACTN4P2-201ENST00000473049 ATAD2BQ9ULI0 1458 aa17.75■□□□□ 0.43
ACTN4P2-201ENST00000473049 DNAJC5BQ9UF47 199 aa17.73■□□□□ 0.43
ACTN4P2-201ENST00000473049 NCAPD3P42695 1498 aa17.73■□□□□ 0.43
ACTN4P2-201ENST00000473049 HMGXB3Q12766 1538 aa17.68■□□□□ 0.42
ACTN4P2-201ENST00000473049 WIZO95785 1651 aa17.66■□□□□ 0.42
ACTN4P2-201ENST00000473049 BAZ1BQ9UIG0 1483 aaKnown RBP17.62■□□□□ 0.41
ACTN4P2-201ENST00000473049 TOP2AP11388 1531 aaKnown RBP17.54■□□□□ 0.4
ACTN4P2-201ENST00000473049 SUPT5HO00267 1087 aaKnown RBP17.49■□□□□ 0.39
ACTN4P2-201ENST00000473049 CCDC88BA6NC98 1476 aa17.31■□□□□ 0.36
ACTN4P2-201ENST00000473049 CADPSQ9ULU8 1353 aa17.21■□□□□ 0.35
ACTN4P2-201ENST00000473049 LAMC3Q9Y6N6 1575 aa17.21■□□□□ 0.35
ACTN4P2-201ENST00000473049 CFTRP13569 1480 aa17.18■□□□□ 0.34
ACTN4P2-201ENST00000473049 NESP48681 1621 aa17.1■□□□□ 0.33
ACTN4P2-201ENST00000473049 PRDM2Q13029 1718 aa17.1■□□□□ 0.33
ACTN4P2-201ENST00000473049 PDS5BQ9NTI5 1447 aa17.08■□□□□ 0.33
ACTN4P2-201ENST00000473049 FANCD2Q9BXW9 1451 aa16.99■□□□□ 0.31
ACTN4P2-201ENST00000473049 ERCC6Q03468 1493 aa16.96■□□□□ 0.31
ACTN4P2-201ENST00000473049 CEP164Q9UPV0 1460 aa16.95■□□□□ 0.3
ACTN4P2-201ENST00000473049 KIF21AQ7Z4S6 1674 aa16.95■□□□□ 0.3
ACTN4P2-201ENST00000473049 MRC2Q9UBG0 1479 aa16.87■□□□□ 0.29
ACTN4P2-201ENST00000473049 ABCC8Q09428 1581 aa16.86■□□□□ 0.29
ACTN4P2-201ENST00000473049 THOC2Q8NI27 1593 aaKnown RBP16.83■□□□□ 0.28
ACTN4P2-201ENST00000473049 WDR62O43379 1518 aa16.81■□□□□ 0.28
ACTN4P2-201ENST00000473049 DNMBPQ6XZF7 1577 aa16.79■□□□□ 0.28
ACTN4P2-201ENST00000473049 URB2Q14146 1524 aaKnown RBP16.78■□□□□ 0.28
ACTN4P2-201ENST00000473049 WRNQ14191 1432 aaPredicted RBP eCLIP16.76■□□□□ 0.27
ACTN4P2-201ENST00000473049 TOPBP1Q92547 1522 aa16.75■□□□□ 0.27
ACTN4P2-201ENST00000473049 CUX2O14529 1486 aa16.73■□□□□ 0.27
ACTN4P2-201ENST00000473049 CUX1P39880 1505 aa16.73■□□□□ 0.27
ACTN4P2-201ENST00000473049 BIVM-ERCC5R4GMW8 1640 aa16.71■□□□□ 0.27
ACTN4P2-201ENST00000473049 TOP2BQ02880 1626 aa16.71■□□□□ 0.26
ACTN4P2-201ENST00000473049 SYNJ1O43426 1573 aa16.67■□□□□ 0.26
ACTN4P2-201ENST00000473049 POLA1P09884 1462 aaPredicted RBP16.62■□□□□ 0.25
ACTN4P2-201ENST00000473049 FGD5Q6ZNL6 1462 aa16.62■□□□□ 0.25
ACTN4P2-201ENST00000473049 IFT140Q96RY7 1462 aa16.61■□□□□ 0.25
ACTN4P2-201ENST00000473049 SOGA1O94964 1423 aa16.58■□□□□ 0.24
ACTN4P2-201ENST00000473049 TRIM41Q8WV44 630 aa16.57■□□□□ 0.24
ACTN4P2-201ENST00000473049 CHIC1Q5VXU3 224 aa16.56■□□□□ 0.24
ACTN4P2-201ENST00000473049 TARBP1Q13395 1621 aaKnown RBP16.56■□□□□ 0.24
ACTN4P2-201ENST00000473049 WDR97A6NE52 1622 aa16.53■□□□□ 0.24
ACTN4P2-201ENST00000473049 ABCA10Q8WWZ4 1543 aa16.52■□□□□ 0.24
ACTN4P2-201ENST00000473049 RAD54L2Q9Y4B4 1467 aa16.51■□□□□ 0.23
ACTN4P2-201ENST00000473049 ZNF608Q9ULD9 1512 aaPredicted RBP16.42■□□□□ 0.22
ACTN4P2-201ENST00000473049 ABCA5Q8WWZ7 1642 aa16.41■□□□□ 0.22
ACTN4P2-201ENST00000473049 KIF27Q86VH2 1401 aa16.41■□□□□ 0.22
ACTN4P2-201ENST00000473049 EIF4G3O43432 1585 aaKnown RBP16.4■□□□□ 0.22
ACTN4P2-201ENST00000473049 TDRD9Q8NDG6 1382 aaKnown RBP16.4■□□□□ 0.22
ACTN4P2-201ENST00000473049 GAPVD1Q14C86 1478 aa16.39■□□□□ 0.21
ACTN4P2-201ENST00000473049 AQRO60306 1485 aaKnown RBP eCLIP16.38■□□□□ 0.21
ACTN4P2-201ENST00000473049 GRIN2BQ13224 1484 aa16.36■□□□□ 0.21
ACTN4P2-201ENST00000473049 EEA1Q15075 1411 aa16.36■□□□□ 0.21
ACTN4P2-201ENST00000473049 ERICH3Q5RHP9 1530 aa16.35■□□□□ 0.21
ACTN4P2-201ENST00000473049 PBRM1Q86U86 1689 aa16.33■□□□□ 0.2
ACTN4P2-201ENST00000473049 MAGI1Q96QZ7 1491 aaPredicted RBP16.3■□□□□ 0.2
ACTN4P2-201ENST00000473049 IGF1RP08069 1367 aa16.28■□□□□ 0.2
ACTN4P2-201ENST00000473049 RUSC2Q8N2Y8 1516 aa16.27■□□□□ 0.19
ACTN4P2-201ENST00000473049 CUL7Q14999 1698 aa16.26■□□□□ 0.19
ACTN4P2-201ENST00000473049 SNAPC4Q5SXM2 1469 aa16.25■□□□□ 0.19
ACTN4P2-201ENST00000473049 FHAD1B1AJZ9 1412 aa16.24■□□□□ 0.19
ACTN4P2-201ENST00000473049 CSRNP3Q8WYN3 585 aa16.22■□□□□ 0.19
ACTN4P2-201ENST00000473049 ADAMTS12P58397 1594 aa16.22■□□□□ 0.19
ACTN4P2-201ENST00000473049 SYNJ2O15056 1496 aa16.22■□□□□ 0.19
ACTN4P2-201ENST00000473049 CARMIL1Q5VZK9 1371 aa16.2■□□□□ 0.18
ACTN4P2-201ENST00000473049 PRXQ9BXM0 1461 aa16.16■□□□□ 0.18
ACTN4P2-201ENST00000473049 CHMP7Q8WUX9 453 aaPredicted RBP16.16■□□□□ 0.18
ACTN4P2-201ENST00000473049 RAPGEF2Q9Y4G8 1499 aa16.15■□□□□ 0.18
ACTN4P2-201ENST00000473049 GRIN2AQ12879 1464 aa16.14■□□□□ 0.17
ACTN4P2-201ENST00000473049 CHD1O14646 1710 aa16.13■□□□□ 0.17
ACTN4P2-201ENST00000473049 FAM9AQ8IZU1 332 aaPredicted RBP16.13■□□□□ 0.17
ACTN4P2-201ENST00000473049 KIF21BO75037 1637 aa16.12■□□□□ 0.17
ACTN4P2-201ENST00000473049 FBLN2P98095 1184 aa16.1■□□□□ 0.17
ACTN4P2-201ENST00000473049 OSCARQ8IYS5 282 aa16.08■□□□□ 0.16
ACTN4P2-201ENST00000473049 NUP160Q12769 1436 aa16.07■□□□□ 0.16
ACTN4P2-201ENST00000473049 GOLGA3Q08378 1498 aa16.04■□□□□ 0.16
ACTN4P2-201ENST00000473049 CEP170Q5SW79 1584 aa16.02■□□□□ 0.15
ACTN4P2-201ENST00000473049 KIAA0586Q9BVV6 1533 aa16■□□□□ 0.15
ACTN4P2-201ENST00000473049 CLASP1Q7Z460 1538 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms