RNA–Protein interactions for RNA: ENST00000473028.5

MED15-221, Transcript of mediator complex subunit 15, humanhuman

TSL 4

Gene MED15, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED15-221ENST00000473028 NISCHQ9Y2I1 1504 aa42.78■■■■■ 4.44
MED15-221ENST00000473028 CCDC180Q9P1Z9 1646 aa38.18■■■■□ 3.7
MED15-221ENST00000473028 ABCC9O60706 1549 aa37.65■■■■□ 3.62
MED15-221ENST00000473028 DCAF8L2P0C7V8 631 aa36.13■■■■□ 3.37
MED15-221ENST00000473028 RB1CC1Q8TDY2 1594 aa36.13■■■■□ 3.37
MED15-221ENST00000473028 NACADO15069 1562 aa35.98■■■■□ 3.35
MED15-221ENST00000473028 MYO15BQ96JP2 1530 aa35.61■■■■□ 3.29
MED15-221ENST00000473028 ZCCHC6Q5VYS8 1495 aaKnown RBP35.54■■■■□ 3.28
MED15-221ENST00000473028 DNAJC5BQ9UF47 199 aa35.44■■■■□ 3.26
MED15-221ENST00000473028 DCAF1Q9Y4B6 1507 aa35.36■■■■□ 3.25
MED15-221ENST00000473028 UNC13AQ9UPW8 1703 aa35.18■■■■□ 3.22
MED15-221ENST00000473028 PABPN1Q86U42 306 aaKnown RBP eCLIP35.14■■■■□ 3.22
MED15-221ENST00000473028 BICRAQ9NZM4 1560 aa34.85■■■■□ 3.17
MED15-221ENST00000473028 SCRIBQ14160 1630 aa34.84■■■■□ 3.17
MED15-221ENST00000473028 SHROOM4Q9ULL8 1493 aa34.6■■■■□ 3.13
MED15-221ENST00000473028 CC2D2AQ9P2K1 1620 aa34.08■■■■□ 3.05
MED15-221ENST00000473028 EIF4G1Q04637 1599 aaKnown RBP34.06■■■■□ 3.04
MED15-221ENST00000473028 CECR2Q9BXF3 1484 aa33.94■■■■□ 3.02
MED15-221ENST00000473028 SMARCA4P51532 1647 aa33.26■■■□□ 2.91
MED15-221ENST00000473028 BAZ1AQ9NRL2 1556 aaPredicted RBP33.25■■■□□ 2.91
MED15-221ENST00000473028 SMARCA2P51531 1590 aa33.17■■■□□ 2.9
MED15-221ENST00000473028 NCAPD3P42695 1498 aa33.15■■■□□ 2.9
MED15-221ENST00000473028 ATAD2BQ9ULI0 1458 aa33.13■■■□□ 2.89
MED15-221ENST00000473028 HMGXB3Q12766 1538 aa32.99■■■□□ 2.87
MED15-221ENST00000473028 BAZ1BQ9UIG0 1483 aaKnown RBP32.95■■■□□ 2.87
MED15-221ENST00000473028 MROH2BQ7Z745 1585 aa32.93■■■□□ 2.86
MED15-221ENST00000473028 PEG3Q9GZU2 1588 aa32.87■■■□□ 2.85
MED15-221ENST00000473028 DNAJC5Q9H3Z4 198 aa32.72■■■□□ 2.83
MED15-221ENST00000473028 ERCC6Q03468 1493 aa32.6■■■□□ 2.81
MED15-221ENST00000473028 WIZO95785 1651 aa32.59■■■□□ 2.81
MED15-221ENST00000473028 CUX2O14529 1486 aa32.57■■■□□ 2.8
MED15-221ENST00000473028 RSF1Q96T23 1441 aaPredicted RBP32.48■■■□□ 2.79
MED15-221ENST00000473028 NESP48681 1621 aa32.42■■■□□ 2.78
MED15-221ENST00000473028 LAMC3Q9Y6N6 1575 aa32.39■■■□□ 2.78
MED15-221ENST00000473028 TOP2AP11388 1531 aaKnown RBP32.26■■■□□ 2.76
MED15-221ENST00000473028 PDS5BQ9NTI5 1447 aa32.25■■■□□ 2.75
MED15-221ENST00000473028 CADPSQ9ULU8 1353 aa32.22■■■□□ 2.75
MED15-221ENST00000473028 THOC2Q8NI27 1593 aaKnown RBP32.11■■■□□ 2.73
MED15-221ENST00000473028 KIF21AQ7Z4S6 1674 aa32.06■■■□□ 2.72
MED15-221ENST00000473028 CFTRP13569 1480 aa31.93■■■□□ 2.7
MED15-221ENST00000473028 CEP164Q9UPV0 1460 aa31.9■■■□□ 2.7
MED15-221ENST00000473028 FANCD2Q9BXW9 1451 aa31.87■■■□□ 2.69
MED15-221ENST00000473028 CCDC88BA6NC98 1476 aa31.86■■■□□ 2.69
MED15-221ENST00000473028 MRC2Q9UBG0 1479 aa31.86■■■□□ 2.69
MED15-221ENST00000473028 PRDM2Q13029 1718 aa31.71■■■□□ 2.67
MED15-221ENST00000473028 WDR62O43379 1518 aa31.7■■■□□ 2.66
MED15-221ENST00000473028 SUPT5HO00267 1087 aaKnown RBP31.67■■■□□ 2.66
MED15-221ENST00000473028 URB2Q14146 1524 aaKnown RBP31.49■■■□□ 2.63
MED15-221ENST00000473028 ABCC8Q09428 1581 aa31.39■■■□□ 2.61
MED15-221ENST00000473028 TOPBP1Q92547 1522 aa31.29■■■□□ 2.6
MED15-221ENST00000473028 DNMBPQ6XZF7 1577 aa31.26■■■□□ 2.6
MED15-221ENST00000473028 IFT140Q96RY7 1462 aa31.21■■■□□ 2.59
MED15-221ENST00000473028 TRIM41Q8WV44 630 aa31.18■■■□□ 2.58
MED15-221ENST00000473028 POLA1P09884 1462 aaPredicted RBP31.01■■■□□ 2.55
MED15-221ENST00000473028 ZNF608Q9ULD9 1512 aaPredicted RBP31■■■□□ 2.55
MED15-221ENST00000473028 OSCARQ8IYS5 282 aa30.95■■■□□ 2.55
MED15-221ENST00000473028 SOGA1O94964 1423 aa30.95■■■□□ 2.54
MED15-221ENST00000473028 FGD5Q6ZNL6 1462 aa30.92■■■□□ 2.54
MED15-221ENST00000473028 CUX1P39880 1505 aa30.92■■■□□ 2.54
MED15-221ENST00000473028 EIF4G3O43432 1585 aaKnown RBP30.92■■■□□ 2.54
MED15-221ENST00000473028 TARBP1Q13395 1621 aaKnown RBP30.91■■■□□ 2.54
MED15-221ENST00000473028 RAD54L2Q9Y4B4 1467 aa30.87■■■□□ 2.53
MED15-221ENST00000473028 AQRO60306 1485 aaKnown RBP eCLIP30.85■■■□□ 2.534e-9■■■■□ 23.1
MED15-221ENST00000473028 TDRD9Q8NDG6 1382 aaKnown RBP30.79■■■□□ 2.52
MED15-221ENST00000473028 WDR97A6NE52 1622 aa30.75■■■□□ 2.51
MED15-221ENST00000473028 RIMBP3CA6NJZ7 1639 aa30.74■■■□□ 2.51
MED15-221ENST00000473028 RIMBP3BA6NNM3 1639 aa30.74■■■□□ 2.51
MED15-221ENST00000473028 RIMBP3Q9UFD9 1639 aa30.74■■■□□ 2.51
MED15-221ENST00000473028 FBLN2P98095 1184 aa30.74■■■□□ 2.51
MED15-221ENST00000473028 WRNQ14191 1432 aaPredicted RBP eCLIP30.73■■■□□ 2.51
MED15-221ENST00000473028 TOP2BQ02880 1626 aa30.63■■■□□ 2.49
MED15-221ENST00000473028 GRIN2BQ13224 1484 aa30.62■■■□□ 2.49
MED15-221ENST00000473028 BIVM-ERCC5R4GMW8 1640 aa30.62■■■□□ 2.49
MED15-221ENST00000473028 CHD1O14646 1710 aa30.59■■■□□ 2.49
MED15-221ENST00000473028 ABCA10Q8WWZ4 1543 aa30.58■■■□□ 2.49
MED15-221ENST00000473028 CHMP7Q8WUX9 453 aaPredicted RBP30.58■■■□□ 2.49
MED15-221ENST00000473028 GAPVD1Q14C86 1478 aa30.57■■■□□ 2.48
MED15-221ENST00000473028 SNAPC4Q5SXM2 1469 aa30.57■■■□□ 2.48
MED15-221ENST00000473028 SYNJ1O43426 1573 aa30.57■■■□□ 2.48
MED15-221ENST00000473028 ARHGEF11O15085 1522 aa30.56■■■□□ 2.48
MED15-221ENST00000473028 MAGI1Q96QZ7 1491 aaPredicted RBP30.55■■■□□ 2.48
MED15-221ENST00000473028 PBRM1Q86U86 1689 aa30.5■■■□□ 2.47
MED15-221ENST00000473028 ABCA5Q8WWZ7 1642 aa30.44■■■□□ 2.46
MED15-221ENST00000473028 SYNJ2O15056 1496 aa30.43■■■□□ 2.46
MED15-221ENST00000473028 ERICH3Q5RHP9 1530 aa30.25■■■□□ 2.43
MED15-221ENST00000473028 ARAP1Q96P48 1450 aa30.23■■■□□ 2.43
MED15-221ENST00000473028 CYB5RLQ6IPT4 315 aa30.22■■■□□ 2.43
MED15-221ENST00000473028 FHAD1B1AJZ9 1412 aa30.22■■■□□ 2.43
MED15-221ENST00000473028 ADAMTS12P58397 1594 aa30.2■■■□□ 2.43
MED15-221ENST00000473028 CLASP1Q7Z460 1538 aa30.18■■■□□ 2.42
MED15-221ENST00000473028 GRIN2AQ12879 1464 aa30.18■■■□□ 2.42
MED15-221ENST00000473028 KIF27Q86VH2 1401 aa30.15■■■□□ 2.42
MED15-221ENST00000473028 NUP160Q12769 1436 aa30■■■□□ 2.39
MED15-221ENST00000473028 CEP170Q5SW79 1584 aa29.98■■■□□ 2.39
MED15-221ENST00000473028 CUL7Q14999 1698 aa29.96■■■□□ 2.39
MED15-221ENST00000473028 TRHP20396 242 aaPredicted RBP29.96■■■□□ 2.39
MED15-221ENST00000473028 IGF1RP08069 1367 aa29.95■■■□□ 2.39
MED15-221ENST00000473028 CARMIL1Q5VZK9 1371 aa29.85■■■□□ 2.37
MED15-221ENST00000473028 JPH4Q96JJ6 628 aa29.81■■■□□ 2.36
MED15-221ENST00000473028 SHROOM2Q13796 1616 aa29.78■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms