RNA–Protein interactions for RNA: ENST00000472962.1

CCDC142-205, Transcript of coiled-coil domain containing 142, humanhuman

TSL 3

Gene CCDC142, Length 645 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-205ENST00000472962 NISCHQ9Y2I1 1504 aa39.27■■■■□ 3.88
CCDC142-205ENST00000472962 ABCC9O60706 1549 aa35.85■■■■□ 3.33
CCDC142-205ENST00000472962 CCDC180Q9P1Z9 1646 aa35.43■■■■□ 3.26
CCDC142-205ENST00000472962 RB1CC1Q8TDY2 1594 aa33.94■■■■□ 3.02
CCDC142-205ENST00000472962 DNAJC5BQ9UF47 199 aa33.84■■■■□ 3.01
CCDC142-205ENST00000472962 DCAF8L2P0C7V8 631 aa33.6■■■□□ 2.97
CCDC142-205ENST00000472962 NACADO15069 1562 aa33.57■■■□□ 2.96
CCDC142-205ENST00000472962 PABPN1Q86U42 306 aaKnown RBP eCLIP33.34■■■□□ 2.93
CCDC142-205ENST00000472962 UNC13AQ9UPW8 1703 aa33.22■■■□□ 2.91
CCDC142-205ENST00000472962 BICRAQ9NZM4 1560 aa32.87■■■□□ 2.85
CCDC142-205ENST00000472962 MYO15BQ96JP2 1530 aa32.86■■■□□ 2.85
CCDC142-205ENST00000472962 ZCCHC6Q5VYS8 1495 aaKnown RBP32.44■■■□□ 2.78
CCDC142-205ENST00000472962 SCRIBQ14160 1630 aa32.35■■■□□ 2.77
CCDC142-205ENST00000472962 SHROOM4Q9ULL8 1493 aa32.35■■■□□ 2.77
CCDC142-205ENST00000472962 CC2D2AQ9P2K1 1620 aa32.34■■■□□ 2.77
CCDC142-205ENST00000472962 DCAF1Q9Y4B6 1507 aa32.33■■■□□ 2.77
CCDC142-205ENST00000472962 CECR2Q9BXF3 1484 aa32.3■■■□□ 2.76
CCDC142-205ENST00000472962 EIF4G1Q04637 1599 aaKnown RBP32.15■■■□□ 2.74
CCDC142-205ENST00000472962 DNAJC5Q9H3Z4 198 aa31.37■■■□□ 2.61
CCDC142-205ENST00000472962 ERCC6Q03468 1493 aa31.05■■■□□ 2.56
CCDC142-205ENST00000472962 CUX2O14529 1486 aa30.97■■■□□ 2.55
CCDC142-205ENST00000472962 NCAPD3P42695 1498 aa30.94■■■□□ 2.54
CCDC142-205ENST00000472962 ATAD2BQ9ULI0 1458 aa30.82■■■□□ 2.53
CCDC142-205ENST00000472962 SMARCA2P51531 1590 aa30.78■■■□□ 2.52
CCDC142-205ENST00000472962 SMARCA4P51532 1647 aa30.76■■■□□ 2.51
CCDC142-205ENST00000472962 HMGXB3Q12766 1538 aa30.7■■■□□ 2.51
CCDC142-205ENST00000472962 NESP48681 1621 aa30.66■■■□□ 2.5
CCDC142-205ENST00000472962 BAZ1BQ9UIG0 1483 aaKnown RBP30.59■■■□□ 2.49
CCDC142-205ENST00000472962 BAZ1AQ9NRL2 1556 aaPredicted RBP30.55■■■□□ 2.48
CCDC142-205ENST00000472962 THOC2Q8NI27 1593 aaKnown RBP30.38■■■□□ 2.45
CCDC142-205ENST00000472962 LAMC3Q9Y6N6 1575 aa30.38■■■□□ 2.45
CCDC142-205ENST00000472962 PEG3Q9GZU2 1588 aa30.36■■■□□ 2.45
CCDC142-205ENST00000472962 KIF21AQ7Z4S6 1674 aa30.33■■■□□ 2.45
CCDC142-205ENST00000472962 MROH2BQ7Z745 1585 aa30.27■■■□□ 2.44
CCDC142-205ENST00000472962 PDS5BQ9NTI5 1447 aa30.24■■■□□ 2.43
CCDC142-205ENST00000472962 TRIM41Q8WV44 630 aa30.05■■■□□ 2.4
CCDC142-205ENST00000472962 CADPSQ9ULU8 1353 aa30.03■■■□□ 2.4
CCDC142-205ENST00000472962 MRC2Q9UBG0 1479 aa29.98■■■□□ 2.39
CCDC142-205ENST00000472962 WIZO95785 1651 aa29.98■■■□□ 2.39
CCDC142-205ENST00000472962 WDR62O43379 1518 aa29.87■■■□□ 2.37
CCDC142-205ENST00000472962 CEP164Q9UPV0 1460 aa29.83■■■□□ 2.37
CCDC142-205ENST00000472962 FANCD2Q9BXW9 1451 aa29.74■■■□□ 2.35
CCDC142-205ENST00000472962 CFTRP13569 1480 aa29.58■■■□□ 2.33
CCDC142-205ENST00000472962 OSCARQ8IYS5 282 aa29.58■■■□□ 2.33
CCDC142-205ENST00000472962 TOP2AP11388 1531 aaKnown RBP29.5■■■□□ 2.31
CCDC142-205ENST00000472962 RSF1Q96T23 1441 aaPredicted RBP29.48■■■□□ 2.31
CCDC142-205ENST00000472962 URB2Q14146 1524 aaKnown RBP29.46■■■□□ 2.31
CCDC142-205ENST00000472962 PRDM2Q13029 1718 aa29.41■■■□□ 2.3
CCDC142-205ENST00000472962 RIMBP3CA6NJZ7 1639 aa29.22■■■□□ 2.27
CCDC142-205ENST00000472962 RIMBP3BA6NNM3 1639 aa29.22■■■□□ 2.27
CCDC142-205ENST00000472962 RIMBP3Q9UFD9 1639 aa29.22■■■□□ 2.27
CCDC142-205ENST00000472962 IFT140Q96RY7 1462 aa29.19■■■□□ 2.26
CCDC142-205ENST00000472962 ZNF608Q9ULD9 1512 aaPredicted RBP29.19■■■□□ 2.26
CCDC142-205ENST00000472962 CCDC88BA6NC98 1476 aa29.17■■■□□ 2.26
CCDC142-205ENST00000472962 TOPBP1Q92547 1522 aa29.11■■■□□ 2.25
CCDC142-205ENST00000472962 ARHGEF11O15085 1522 aa29.06■■■□□ 2.24
CCDC142-205ENST00000472962 EIF4G3O43432 1585 aaKnown RBP29.05■■■□□ 2.24
CCDC142-205ENST00000472962 ABCC8Q09428 1581 aa29.04■■■□□ 2.24
CCDC142-205ENST00000472962 DNMBPQ6XZF7 1577 aa28.99■■■□□ 2.23
CCDC142-205ENST00000472962 CYB5RLQ6IPT4 315 aa28.97■■■□□ 2.23
CCDC142-205ENST00000472962 CHD1O14646 1710 aa28.97■■■□□ 2.23
CCDC142-205ENST00000472962 FBLN2P98095 1184 aa28.96■■■□□ 2.23
CCDC142-205ENST00000472962 AQRO60306 1485 aaKnown RBP eCLIP28.91■■■□□ 2.222e-8■■■□□ 18.1
CCDC142-205ENST00000472962 TRHP20396 242 aaPredicted RBP28.86■■■□□ 2.21
CCDC142-205ENST00000472962 TARBP1Q13395 1621 aaKnown RBP28.86■■■□□ 2.21
CCDC142-205ENST00000472962 POLA1P09884 1462 aaPredicted RBP28.78■■■□□ 2.2
CCDC142-205ENST00000472962 RAD54L2Q9Y4B4 1467 aa28.72■■■□□ 2.19
CCDC142-205ENST00000472962 ARAP1Q96P48 1450 aa28.72■■■□□ 2.19
CCDC142-205ENST00000472962 SOGA1O94964 1423 aa28.69■■■□□ 2.18
CCDC142-205ENST00000472962 TDRD9Q8NDG6 1382 aaKnown RBP28.69■■■□□ 2.18
CCDC142-205ENST00000472962 SNAPC4Q5SXM2 1469 aa28.61■■■□□ 2.17
CCDC142-205ENST00000472962 CHMP7Q8WUX9 453 aaPredicted RBP28.61■■■□□ 2.17
CCDC142-205ENST00000472962 FGD5Q6ZNL6 1462 aa28.59■■■□□ 2.17
CCDC142-205ENST00000472962 SYNJ1O43426 1573 aa28.54■■■□□ 2.16
CCDC142-205ENST00000472962 WDR97A6NE52 1622 aa28.53■■■□□ 2.16
CCDC142-205ENST00000472962 MAGI1Q96QZ7 1491 aaPredicted RBP28.48■■■□□ 2.15
CCDC142-205ENST00000472962 CLASP1Q7Z460 1538 aa28.48■■■□□ 2.15
CCDC142-205ENST00000472962 CUX1P39880 1505 aa28.47■■■□□ 2.15
CCDC142-205ENST00000472962 GRIN2BQ13224 1484 aa28.46■■■□□ 2.15
CCDC142-205ENST00000472962 PBRM1Q86U86 1689 aa28.42■■■□□ 2.14
CCDC142-205ENST00000472962 SYNJ2O15056 1496 aa28.4■■■□□ 2.14
CCDC142-205ENST00000472962 GAPVD1Q14C86 1478 aa28.34■■■□□ 2.13
CCDC142-205ENST00000472962 AEBP2Q6ZN18 517 aaPredicted RBP28.32■■■□□ 2.12
CCDC142-205ENST00000472962 ABCA5Q8WWZ7 1642 aa28.19■■■□□ 2.1
CCDC142-205ENST00000472962 ABCA10Q8WWZ4 1543 aa28.18■■■□□ 2.1
CCDC142-205ENST00000472962 SUPT5HO00267 1087 aaKnown RBP28.15■■■□□ 2.1
CCDC142-205ENST00000472962 GRIN2AQ12879 1464 aa28.09■■■□□ 2.09
CCDC142-205ENST00000472962 WRNQ14191 1432 aaPredicted RBP eCLIP28.06■■■□□ 2.08
CCDC142-205ENST00000472962 ERCC6L2Q5T890 1561 aa28.06■■■□□ 2.08
CCDC142-205ENST00000472962 ADAMTS12P58397 1594 aa28.03■■■□□ 2.08
CCDC142-205ENST00000472962 CEP170Q5SW79 1584 aa28.01■■■□□ 2.07
CCDC142-205ENST00000472962 NUP160Q12769 1436 aa27.94■■■□□ 2.06
CCDC142-205ENST00000472962 BIVM-ERCC5R4GMW8 1640 aa27.94■■■□□ 2.06
CCDC142-205ENST00000472962 TOP2BQ02880 1626 aa27.93■■■□□ 2.06
CCDC142-205ENST00000472962 FHAD1B1AJZ9 1412 aa27.92■■■□□ 2.06
CCDC142-205ENST00000472962 SHROOM2Q13796 1616 aa27.89■■■□□ 2.05
CCDC142-205ENST00000472962 ERICH3Q5RHP9 1530 aa27.85■■■□□ 2.05
CCDC142-205ENST00000472962 KIF13AQ9H1H9 1805 aa27.81■■■□□ 2.04
CCDC142-205ENST00000472962 PRG4Q92954 1404 aaPredicted RBP27.8■■■□□ 2.04
CCDC142-205ENST00000472962 JPH4Q96JJ6 628 aa27.76■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms