RNA–Protein interactions for RNA: ENST00000472898.5

SSR2-206, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 2

Gene SSR2, Length 711 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-206ENST00000472898 NISCHQ9Y2I1 1504 aa24.87■■□□□ 1.57
SSR2-206ENST00000472898 CCDC180Q9P1Z9 1646 aa22.06■■□□□ 1.12
SSR2-206ENST00000472898 ABCC9O60706 1549 aa21.43■■□□□ 1.02
SSR2-206ENST00000472898 DCAF8L2P0C7V8 631 aa20.82■□□□□ 0.92
SSR2-206ENST00000472898 NACADO15069 1562 aa20.76■□□□□ 0.91
SSR2-206ENST00000472898 RB1CC1Q8TDY2 1594 aa20.74■□□□□ 0.91
SSR2-206ENST00000472898 ZCCHC6Q5VYS8 1495 aaKnown RBP20.71■□□□□ 0.91
SSR2-206ENST00000472898 MYO15BQ96JP2 1530 aa20.68■□□□□ 0.9
SSR2-206ENST00000472898 DCAF1Q9Y4B6 1507 aa20.63■□□□□ 0.89
SSR2-206ENST00000472898 UNC13AQ9UPW8 1703 aa20.16■□□□□ 0.82
SSR2-206ENST00000472898 SCRIBQ14160 1630 aa20.07■□□□□ 0.8
SSR2-206ENST00000472898 PABPN1Q86U42 306 aaKnown RBP eCLIP20.07■□□□□ 0.8
SSR2-206ENST00000472898 BICRAQ9NZM4 1560 aa20■□□□□ 0.79
SSR2-206ENST00000472898 SHROOM4Q9ULL8 1493 aa19.93■□□□□ 0.78
SSR2-206ENST00000472898 DNAJC5BQ9UF47 199 aa19.53■□□□□ 0.72
SSR2-206ENST00000472898 EIF4G1Q04637 1599 aaKnown RBP19.51■□□□□ 0.71
SSR2-206ENST00000472898 CC2D2AQ9P2K1 1620 aa19.4■□□□□ 0.7
SSR2-206ENST00000472898 CECR2Q9BXF3 1484 aa19.3■□□□□ 0.68
SSR2-206ENST00000472898 BAZ1AQ9NRL2 1556 aaPredicted RBP19.29■□□□□ 0.68
SSR2-206ENST00000472898 SMARCA4P51532 1647 aa19.25■□□□□ 0.67
SSR2-206ENST00000472898 SMARCA2P51531 1590 aa19.16■□□□□ 0.66
SSR2-206ENST00000472898 NCAPD3P42695 1498 aa19.15■□□□□ 0.66
SSR2-206ENST00000472898 ATAD2BQ9ULI0 1458 aa19.14■□□□□ 0.65
SSR2-206ENST00000472898 MROH2BQ7Z745 1585 aa19.12■□□□□ 0.65
SSR2-206ENST00000472898 PEG3Q9GZU2 1588 aa19.08■□□□□ 0.65
SSR2-206ENST00000472898 HMGXB3Q12766 1538 aa19.03■□□□□ 0.64
SSR2-206ENST00000472898 BAZ1BQ9UIG0 1483 aaKnown RBP19■□□□□ 0.63
SSR2-206ENST00000472898 RSF1Q96T23 1441 aaPredicted RBP18.99■□□□□ 0.63
SSR2-206ENST00000472898 WIZO95785 1651 aa18.92■□□□□ 0.62
SSR2-206ENST00000472898 AEBP2Q6ZN18 517 aaPredicted RBP18.89■□□□□ 0.61
SSR2-206ENST00000472898 TOP2AP11388 1531 aaKnown RBP18.77■□□□□ 0.6
SSR2-206ENST00000472898 SUPT5HO00267 1087 aaKnown RBP18.65■□□□□ 0.58
SSR2-206ENST00000472898 LAMC3Q9Y6N6 1575 aa18.61■□□□□ 0.57
SSR2-206ENST00000472898 CADPSQ9ULU8 1353 aa18.6■□□□□ 0.57
SSR2-206ENST00000472898 CHIC1Q5VXU3 224 aa18.57■□□□□ 0.56
SSR2-206ENST00000472898 CCDC88BA6NC98 1476 aa18.55■□□□□ 0.56
SSR2-206ENST00000472898 NESP48681 1621 aa18.54■□□□□ 0.56
SSR2-206ENST00000472898 PDS5BQ9NTI5 1447 aa18.54■□□□□ 0.56
SSR2-206ENST00000472898 ERCC6Q03468 1493 aa18.53■□□□□ 0.56
SSR2-206ENST00000472898 CFTRP13569 1480 aa18.49■□□□□ 0.55
SSR2-206ENST00000472898 FANCD2Q9BXW9 1451 aa18.35■□□□□ 0.53
SSR2-206ENST00000472898 KIF21AQ7Z4S6 1674 aa18.34■□□□□ 0.53
SSR2-206ENST00000472898 CEP164Q9UPV0 1460 aa18.33■□□□□ 0.53
SSR2-206ENST00000472898 PRDM2Q13029 1718 aa18.33■□□□□ 0.52
SSR2-206ENST00000472898 CUX2O14529 1486 aa18.29■□□□□ 0.52
SSR2-206ENST00000472898 MRC2Q9UBG0 1479 aa18.26■□□□□ 0.51
SSR2-206ENST00000472898 THOC2Q8NI27 1593 aaKnown RBP18.24■□□□□ 0.51
SSR2-206ENST00000472898 ABCC8Q09428 1581 aa18.18■□□□□ 0.5
SSR2-206ENST00000472898 WDR62O43379 1518 aa18.18■□□□□ 0.5
SSR2-206ENST00000472898 URB2Q14146 1524 aaKnown RBP18.11■□□□□ 0.49
SSR2-206ENST00000472898 DNMBPQ6XZF7 1577 aa18.05■□□□□ 0.48
SSR2-206ENST00000472898 TOPBP1Q92547 1522 aa18.05■□□□□ 0.48
SSR2-206ENST00000472898 IFT140Q96RY7 1462 aa17.96■□□□□ 0.47
SSR2-206ENST00000472898 CUX1P39880 1505 aa17.93■□□□□ 0.46
SSR2-206ENST00000472898 WRNQ14191 1432 aaPredicted RBP eCLIP17.93■□□□□ 0.46
SSR2-206ENST00000472898 POLA1P09884 1462 aaPredicted RBP17.9■□□□□ 0.46
SSR2-206ENST00000472898 SOGA1O94964 1423 aa17.89■□□□□ 0.46
SSR2-206ENST00000472898 FGD5Q6ZNL6 1462 aa17.88■□□□□ 0.45
SSR2-206ENST00000472898 TOP2BQ02880 1626 aa17.85■□□□□ 0.45
SSR2-206ENST00000472898 BIVM-ERCC5R4GMW8 1640 aa17.83■□□□□ 0.45
SSR2-206ENST00000472898 TARBP1Q13395 1621 aaKnown RBP17.83■□□□□ 0.44
SSR2-206ENST00000472898 RAD54L2Q9Y4B4 1467 aa17.81■□□□□ 0.44
SSR2-206ENST00000472898 SYNJ1O43426 1573 aa17.79■□□□□ 0.44
SSR2-206ENST00000472898 WDR97A6NE52 1622 aa17.78■□□□□ 0.44
SSR2-206ENST00000472898 ZNF608Q9ULD9 1512 aaPredicted RBP17.77■□□□□ 0.44
SSR2-206ENST00000472898 ABCA10Q8WWZ4 1543 aa17.74■□□□□ 0.43
SSR2-206ENST00000472898 TDRD9Q8NDG6 1382 aaKnown RBP17.74■□□□□ 0.43
SSR2-206ENST00000472898 AQRO60306 1485 aaKnown RBP eCLIP17.74■□□□□ 0.43
SSR2-206ENST00000472898 EIF4G3O43432 1585 aaKnown RBP17.71■□□□□ 0.43
SSR2-206ENST00000472898 GAPVD1Q14C86 1478 aa17.68■□□□□ 0.42
SSR2-206ENST00000472898 TRIM41Q8WV44 630 aa17.67■□□□□ 0.42
SSR2-206ENST00000472898 GRIN2BQ13224 1484 aa17.66■□□□□ 0.42
SSR2-206ENST00000472898 OSCARQ8IYS5 282 aa17.62■□□□□ 0.41
SSR2-206ENST00000472898 ABCA5Q8WWZ7 1642 aa17.61■□□□□ 0.41
SSR2-206ENST00000472898 DNAJC5Q9H3Z4 198 aa17.6■□□□□ 0.41
SSR2-206ENST00000472898 MAGI1Q96QZ7 1491 aaPredicted RBP17.6■□□□□ 0.41
SSR2-206ENST00000472898 KIF27Q86VH2 1401 aa17.59■□□□□ 0.41
SSR2-206ENST00000472898 FBLN2P98095 1184 aa17.58■□□□□ 0.4
SSR2-206ENST00000472898 CHMP7Q8WUX9 453 aaPredicted RBP17.58■□□□□ 0.4
SSR2-206ENST00000472898 PBRM1Q86U86 1689 aa17.57■□□□□ 0.4
SSR2-206ENST00000472898 SNAPC4Q5SXM2 1469 aa17.56■□□□□ 0.4
SSR2-206ENST00000472898 ERICH3Q5RHP9 1530 aa17.55■□□□□ 0.4
SSR2-206ENST00000472898 SYNJ2O15056 1496 aa17.52■□□□□ 0.4
SSR2-206ENST00000472898 FHAD1B1AJZ9 1412 aa17.49■□□□□ 0.39
SSR2-206ENST00000472898 IGF1RP08069 1367 aa17.47■□□□□ 0.39
SSR2-206ENST00000472898 CHD1O14646 1710 aa17.47■□□□□ 0.39
SSR2-206ENST00000472898 ADAMTS12P58397 1594 aa17.43■□□□□ 0.38
SSR2-206ENST00000472898 GRIN2AQ12879 1464 aa17.41■□□□□ 0.38
SSR2-206ENST00000472898 CUL7Q14999 1698 aa17.4■□□□□ 0.38
SSR2-206ENST00000472898 CARMIL1Q5VZK9 1371 aa17.4■□□□□ 0.38
SSR2-206ENST00000472898 EEA1Q15075 1411 aa17.37■□□□□ 0.37
SSR2-206ENST00000472898 RUSC2Q8N2Y8 1516 aa17.34■□□□□ 0.37
SSR2-206ENST00000472898 NUP160Q12769 1436 aa17.32■□□□□ 0.36
SSR2-206ENST00000472898 CSRNP3Q8WYN3 585 aa17.32■□□□□ 0.36
SSR2-206ENST00000472898 CLASP1Q7Z460 1538 aa17.29■□□□□ 0.36
SSR2-206ENST00000472898 RAPGEF2Q9Y4G8 1499 aa17.29■□□□□ 0.36
SSR2-206ENST00000472898 CEP170Q5SW79 1584 aa17.26■□□□□ 0.35
SSR2-206ENST00000472898 KIAA0586Q9BVV6 1533 aa17.23■□□□□ 0.35
SSR2-206ENST00000472898 JPH4Q96JJ6 628 aa17.23■□□□□ 0.35
SSR2-206ENST00000472898 FAM9AQ8IZU1 332 aaPredicted RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms