RNA–Protein interactions for RNA: ENST00000472876.5

SPECC1-209, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 3

Gene SPECC1, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-209ENST00000472876 NISCHQ9Y2I1 1504 aa39.37■■■■□ 3.89
SPECC1-209ENST00000472876 ABCC9O60706 1549 aa35.42■■■■□ 3.26
SPECC1-209ENST00000472876 CCDC180Q9P1Z9 1646 aa35.4■■■■□ 3.26
SPECC1-209ENST00000472876 RB1CC1Q8TDY2 1594 aa33.68■■■□□ 2.98
SPECC1-209ENST00000472876 NACADO15069 1562 aa33.45■■■□□ 2.95
SPECC1-209ENST00000472876 DNAJC5BQ9UF47 199 aa33.35■■■□□ 2.93
SPECC1-209ENST00000472876 DCAF8L2P0C7V8 631 aa33.08■■■□□ 2.89
SPECC1-209ENST00000472876 UNC13AQ9UPW8 1703 aa33.02■■■□□ 2.88
SPECC1-209ENST00000472876 MYO15BQ96JP2 1530 aa33■■■□□ 2.87
SPECC1-209ENST00000472876 PABPN1Q86U42 306 aaKnown RBP eCLIP32.92■■■□□ 2.86
SPECC1-209ENST00000472876 BICRAQ9NZM4 1560 aa32.8■■■□□ 2.84
SPECC1-209ENST00000472876 ZCCHC6Q5VYS8 1495 aaKnown RBP32.64■■■□□ 2.82
SPECC1-209ENST00000472876 DCAF1Q9Y4B6 1507 aa32.53■■■□□ 2.8
SPECC1-209ENST00000472876 SHROOM4Q9ULL8 1493 aa32.29■■■□□ 2.76
SPECC1-209ENST00000472876 SCRIBQ14160 1630 aa32.21■■■□□ 2.75
SPECC1-209ENST00000472876 CC2D2AQ9P2K1 1620 aa32.03■■■□□ 2.72
SPECC1-209ENST00000472876 EIF4G1Q04637 1599 aaKnown RBP31.94■■■□□ 2.7
SPECC1-209ENST00000472876 CECR2Q9BXF3 1484 aa31.91■■■□□ 2.7
SPECC1-209ENST00000472876 NCAPD3P42695 1498 aa30.89■■■□□ 2.53
SPECC1-209ENST00000472876 ATAD2BQ9ULI0 1458 aa30.78■■■□□ 2.52
SPECC1-209ENST00000472876 SMARCA4P51532 1647 aa30.75■■■□□ 2.51
SPECC1-209ENST00000472876 HMGXB3Q12766 1538 aa30.67■■■□□ 2.5
SPECC1-209ENST00000472876 SMARCA2P51531 1590 aa30.66■■■□□ 2.5
SPECC1-209ENST00000472876 DNAJC5Q9H3Z4 198 aa30.62■■■□□ 2.49
SPECC1-209ENST00000472876 CUX2O14529 1486 aa30.57■■■□□ 2.48
SPECC1-209ENST00000472876 BAZ1AQ9NRL2 1556 aaPredicted RBP30.54■■■□□ 2.48
SPECC1-209ENST00000472876 ERCC6Q03468 1493 aa30.53■■■□□ 2.48
SPECC1-209ENST00000472876 PEG3Q9GZU2 1588 aa30.49■■■□□ 2.47
SPECC1-209ENST00000472876 BAZ1BQ9UIG0 1483 aaKnown RBP30.44■■■□□ 2.46
SPECC1-209ENST00000472876 NESP48681 1621 aa30.44■■■□□ 2.46
SPECC1-209ENST00000472876 MROH2BQ7Z745 1585 aa30.35■■■□□ 2.45
SPECC1-209ENST00000472876 THOC2Q8NI27 1593 aaKnown RBP30.2■■■□□ 2.42
SPECC1-209ENST00000472876 LAMC3Q9Y6N6 1575 aa30.2■■■□□ 2.42
SPECC1-209ENST00000472876 KIF21AQ7Z4S6 1674 aa30.07■■■□□ 2.41
SPECC1-209ENST00000472876 WIZO95785 1651 aa29.98■■■□□ 2.39
SPECC1-209ENST00000472876 PDS5BQ9NTI5 1447 aa29.96■■■□□ 2.39
SPECC1-209ENST00000472876 CADPSQ9ULU8 1353 aa29.9■■■□□ 2.38
SPECC1-209ENST00000472876 MRC2Q9UBG0 1479 aa29.76■■■□□ 2.35
SPECC1-209ENST00000472876 WDR62O43379 1518 aa29.74■■■□□ 2.35
SPECC1-209ENST00000472876 RSF1Q96T23 1441 aaPredicted RBP29.67■■■□□ 2.34
SPECC1-209ENST00000472876 CEP164Q9UPV0 1460 aa29.61■■■□□ 2.33
SPECC1-209ENST00000472876 CFTRP13569 1480 aa29.59■■■□□ 2.33
SPECC1-209ENST00000472876 TOP2AP11388 1531 aaKnown RBP29.59■■■□□ 2.33
SPECC1-209ENST00000472876 FANCD2Q9BXW9 1451 aa29.58■■■□□ 2.33
SPECC1-209ENST00000472876 URB2Q14146 1524 aaKnown RBP29.39■■■□□ 2.3
SPECC1-209ENST00000472876 PRDM2Q13029 1718 aa29.32■■■□□ 2.28
SPECC1-209ENST00000472876 CCDC88BA6NC98 1476 aa29.24■■■□□ 2.27
SPECC1-209ENST00000472876 TRIM41Q8WV44 630 aa29.17■■■□□ 2.26
SPECC1-209ENST00000472876 OSCARQ8IYS5 282 aa29.07■■■□□ 2.24
SPECC1-209ENST00000472876 TOPBP1Q92547 1522 aa29.04■■■□□ 2.24
SPECC1-209ENST00000472876 ZNF608Q9ULD9 1512 aaPredicted RBP29.03■■■□□ 2.24
SPECC1-209ENST00000472876 IFT140Q96RY7 1462 aa29.02■■■□□ 2.24
SPECC1-209ENST00000472876 DNMBPQ6XZF7 1577 aa28.92■■■□□ 2.22
SPECC1-209ENST00000472876 ABCC8Q09428 1581 aa28.9■■■□□ 2.22
SPECC1-209ENST00000472876 EIF4G3O43432 1585 aaKnown RBP28.88■■■□□ 2.21
SPECC1-209ENST00000472876 TARBP1Q13395 1621 aaKnown RBP28.83■■■□□ 2.21
SPECC1-209ENST00000472876 RIMBP3CA6NJZ7 1639 aa28.82■■■□□ 2.2
SPECC1-209ENST00000472876 RIMBP3BA6NNM3 1639 aa28.82■■■□□ 2.2
SPECC1-209ENST00000472876 RIMBP3Q9UFD9 1639 aa28.82■■■□□ 2.2
SPECC1-209ENST00000472876 POLA1P09884 1462 aaPredicted RBP28.73■■■□□ 2.19
SPECC1-209ENST00000472876 AQRO60306 1485 aaKnown RBP eCLIP28.72■■■□□ 2.19
SPECC1-209ENST00000472876 ARHGEF11O15085 1522 aa28.7■■■□□ 2.19
SPECC1-209ENST00000472876 CHD1O14646 1710 aa28.68■■■□□ 2.18
SPECC1-209ENST00000472876 RAD54L2Q9Y4B4 1467 aa28.62■■■□□ 2.17
SPECC1-209ENST00000472876 SUPT5HO00267 1087 aaKnown RBP28.58■■■□□ 2.17
SPECC1-209ENST00000472876 SOGA1O94964 1423 aa28.54■■■□□ 2.16
SPECC1-209ENST00000472876 FGD5Q6ZNL6 1462 aa28.53■■■□□ 2.16
SPECC1-209ENST00000472876 CUX1P39880 1505 aa28.53■■■□□ 2.16
SPECC1-209ENST00000472876 TDRD9Q8NDG6 1382 aaKnown RBP28.5■■■□□ 2.15
SPECC1-209ENST00000472876 WDR97A6NE52 1622 aa28.49■■■□□ 2.15
SPECC1-209ENST00000472876 ARAP1Q96P48 1450 aa28.44■■■□□ 2.14
SPECC1-209ENST00000472876 SNAPC4Q5SXM2 1469 aa28.43■■■□□ 2.14
SPECC1-209ENST00000472876 FBLN2P98095 1184 aa28.43■■■□□ 2.14
SPECC1-209ENST00000472876 CYB5RLQ6IPT4 315 aa28.4■■■□□ 2.14
SPECC1-209ENST00000472876 CLASP1Q7Z460 1538 aa28.37■■■□□ 2.13
SPECC1-209ENST00000472876 MAGI1Q96QZ7 1491 aaPredicted RBP28.35■■■□□ 2.13
SPECC1-209ENST00000472876 GRIN2BQ13224 1484 aa28.32■■■□□ 2.12
SPECC1-209ENST00000472876 PBRM1Q86U86 1689 aa28.26■■■□□ 2.12
SPECC1-209ENST00000472876 SYNJ1O43426 1573 aa28.26■■■□□ 2.11
SPECC1-209ENST00000472876 SYNJ2O15056 1496 aa28.26■■■□□ 2.11
SPECC1-209ENST00000472876 ABCA5Q8WWZ7 1642 aa28.22■■■□□ 2.11
SPECC1-209ENST00000472876 CHMP7Q8WUX9 453 aaPredicted RBP28.22■■■□□ 2.11
SPECC1-209ENST00000472876 GAPVD1Q14C86 1478 aa28.21■■■□□ 2.11
SPECC1-209ENST00000472876 ABCA10Q8WWZ4 1543 aa28.21■■■□□ 2.11
SPECC1-209ENST00000472876 BIVM-ERCC5R4GMW8 1640 aa28.06■■■□□ 2.08
SPECC1-209ENST00000472876 TRHP20396 242 aaPredicted RBP28.05■■■□□ 2.08
SPECC1-209ENST00000472876 TOP2BQ02880 1626 aa28.03■■■□□ 2.08
SPECC1-209ENST00000472876 WRNQ14191 1432 aaPredicted RBP eCLIP28.02■■■□□ 2.08
SPECC1-209ENST00000472876 ADAMTS12P58397 1594 aa27.99■■■□□ 2.07
SPECC1-209ENST00000472876 GRIN2AQ12879 1464 aa27.99■■■□□ 2.07
SPECC1-209ENST00000472876 CEP170Q5SW79 1584 aa27.93■■■□□ 2.06
SPECC1-209ENST00000472876 ERCC6L2Q5T890 1561 aa27.93■■■□□ 2.06
SPECC1-209ENST00000472876 NUP160Q12769 1436 aa27.92■■■□□ 2.06
SPECC1-209ENST00000472876 ERICH3Q5RHP9 1530 aa27.85■■■□□ 2.05
SPECC1-209ENST00000472876 SHROOM2Q13796 1616 aa27.85■■■□□ 2.05
SPECC1-209ENST00000472876 FHAD1B1AJZ9 1412 aa27.84■■■□□ 2.05
SPECC1-209ENST00000472876 RUSC2Q8N2Y8 1516 aa27.62■■■□□ 2.01
SPECC1-209ENST00000472876 PRG4Q92954 1404 aaPredicted RBP27.6■■■□□ 2.01
SPECC1-209ENST00000472876 JPH4Q96JJ6 628 aa27.53■■■□□ 2
SPECC1-209ENST00000472876 KIF13AQ9H1H9 1805 aa27.51■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 179.9 ms