RNA–Protein interactions for RNA: ENST00000472390.1

RHBDF1-207, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 4

Gene RHBDF1, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-207ENST00000472390 NISCHQ9Y2I1 1504 aa47.81■■■■■ 5.24
RHBDF1-207ENST00000472390 ABCC9O60706 1549 aa43.09■■■■■ 4.49
RHBDF1-207ENST00000472390 CCDC180Q9P1Z9 1646 aa42.9■■■■■ 4.46
RHBDF1-207ENST00000472390 RB1CC1Q8TDY2 1594 aa40.83■■■■■ 4.13
RHBDF1-207ENST00000472390 NACADO15069 1562 aa40.5■■■■■ 4.07
RHBDF1-207ENST00000472390 DNAJC5BQ9UF47 199 aa40.48■■■■■ 4.07
RHBDF1-207ENST00000472390 DCAF8L2P0C7V8 631 aa40.39■■■■■ 4.06
RHBDF1-207ENST00000472390 UNC13AQ9UPW8 1703 aa40.13■■■■■ 4.02
RHBDF1-207ENST00000472390 PABPN1Q86U42 306 aaKnown RBP eCLIP40.09■■■■■ 4.01
RHBDF1-207ENST00000472390 MYO15BQ96JP2 1530 aa39.83■■■■□ 3.97
RHBDF1-207ENST00000472390 BICRAQ9NZM4 1560 aa39.8■■■■□ 3.96
RHBDF1-207ENST00000472390 ZCCHC6Q5VYS8 1495 aaKnown RBP39.64■■■■□ 3.94
RHBDF1-207ENST00000472390 DCAF1Q9Y4B6 1507 aa39.35■■■■□ 3.89
RHBDF1-207ENST00000472390 SCRIBQ14160 1630 aa39.27■■■■□ 3.88
RHBDF1-207ENST00000472390 SHROOM4Q9ULL8 1493 aa38.97■■■■□ 3.83
RHBDF1-207ENST00000472390 CC2D2AQ9P2K1 1620 aa38.89■■■■□ 3.82
RHBDF1-207ENST00000472390 EIF4G1Q04637 1599 aaKnown RBP38.76■■■■□ 3.8
RHBDF1-207ENST00000472390 CECR2Q9BXF3 1484 aa38.73■■■■□ 3.79
RHBDF1-207ENST00000472390 NCAPD3P42695 1498 aa37.39■■■■□ 3.58
RHBDF1-207ENST00000472390 SMARCA4P51532 1647 aa37.36■■■■□ 3.57
RHBDF1-207ENST00000472390 ATAD2BQ9ULI0 1458 aa37.35■■■■□ 3.57
RHBDF1-207ENST00000472390 SMARCA2P51531 1590 aa37.18■■■■□ 3.54
RHBDF1-207ENST00000472390 HMGXB3Q12766 1538 aa37.15■■■■□ 3.54
RHBDF1-207ENST00000472390 ERCC6Q03468 1493 aa37.1■■■■□ 3.53
RHBDF1-207ENST00000472390 BAZ1AQ9NRL2 1556 aaPredicted RBP37.07■■■■□ 3.52
RHBDF1-207ENST00000472390 NESP48681 1621 aa37.05■■■■□ 3.52
RHBDF1-207ENST00000472390 DNAJC5Q9H3Z4 198 aa36.99■■■■□ 3.51
RHBDF1-207ENST00000472390 BAZ1BQ9UIG0 1483 aaKnown RBP36.99■■■■□ 3.51
RHBDF1-207ENST00000472390 CUX2O14529 1486 aa36.96■■■■□ 3.51
RHBDF1-207ENST00000472390 MROH2BQ7Z745 1585 aa36.94■■■■□ 3.5
RHBDF1-207ENST00000472390 PEG3Q9GZU2 1588 aa36.9■■■■□ 3.5
RHBDF1-207ENST00000472390 THOC2Q8NI27 1593 aaKnown RBP36.65■■■■□ 3.46
RHBDF1-207ENST00000472390 KIF21AQ7Z4S6 1674 aa36.58■■■■□ 3.45
RHBDF1-207ENST00000472390 LAMC3Q9Y6N6 1575 aa36.58■■■■□ 3.45
RHBDF1-207ENST00000472390 WIZO95785 1651 aa36.54■■■■□ 3.44
RHBDF1-207ENST00000472390 PDS5BQ9NTI5 1447 aa36.3■■■■□ 3.4
RHBDF1-207ENST00000472390 CADPSQ9ULU8 1353 aa36.26■■■■□ 3.39
RHBDF1-207ENST00000472390 MRC2Q9UBG0 1479 aa36.11■■■■□ 3.37
RHBDF1-207ENST00000472390 RSF1Q96T23 1441 aaPredicted RBP36.08■■■■□ 3.37
RHBDF1-207ENST00000472390 WDR62O43379 1518 aa36.04■■■■□ 3.36
RHBDF1-207ENST00000472390 TOP2AP11388 1531 aaKnown RBP35.97■■■■□ 3.35
RHBDF1-207ENST00000472390 CEP164Q9UPV0 1460 aa35.96■■■■□ 3.35
RHBDF1-207ENST00000472390 FANCD2Q9BXW9 1451 aa35.93■■■■□ 3.34
RHBDF1-207ENST00000472390 CFTRP13569 1480 aa35.86■■■■□ 3.33
RHBDF1-207ENST00000472390 URB2Q14146 1524 aaKnown RBP35.72■■■■□ 3.31
RHBDF1-207ENST00000472390 PRDM2Q13029 1718 aa35.6■■■■□ 3.29
RHBDF1-207ENST00000472390 CCDC88BA6NC98 1476 aa35.56■■■■□ 3.28
RHBDF1-207ENST00000472390 TRIM41Q8WV44 630 aa35.52■■■■□ 3.28
RHBDF1-207ENST00000472390 ZNF608Q9ULD9 1512 aaPredicted RBP35.32■■■■□ 3.24
RHBDF1-207ENST00000472390 TOPBP1Q92547 1522 aa35.27■■■■□ 3.24
RHBDF1-207ENST00000472390 OSCARQ8IYS5 282 aa35.21■■■■□ 3.23
RHBDF1-207ENST00000472390 IFT140Q96RY7 1462 aa35.19■■■■□ 3.22
RHBDF1-207ENST00000472390 DNMBPQ6XZF7 1577 aa35.13■■■■□ 3.21
RHBDF1-207ENST00000472390 EIF4G3O43432 1585 aaKnown RBP35.11■■■■□ 3.21
RHBDF1-207ENST00000472390 RIMBP3CA6NJZ7 1639 aa35■■■■□ 3.19
RHBDF1-207ENST00000472390 RIMBP3BA6NNM3 1639 aa35■■■■□ 3.19
RHBDF1-207ENST00000472390 RIMBP3Q9UFD9 1639 aa35■■■■□ 3.19
RHBDF1-207ENST00000472390 TARBP1Q13395 1621 aaKnown RBP34.99■■■■□ 3.19
RHBDF1-207ENST00000472390 ABCC8Q09428 1581 aa34.97■■■■□ 3.19
RHBDF1-207ENST00000472390 AQRO60306 1485 aaKnown RBP eCLIP34.93■■■■□ 3.182e-18■■■■■ 99.2
RHBDF1-207ENST00000472390 POLA1P09884 1462 aaPredicted RBP34.91■■■■□ 3.18
RHBDF1-207ENST00000472390 CHD1O14646 1710 aa34.89■■■■□ 3.18
RHBDF1-207ENST00000472390 RAD54L2Q9Y4B4 1467 aa34.85■■■■□ 3.17
RHBDF1-207ENST00000472390 ARHGEF11O15085 1522 aa34.84■■■■□ 3.17
RHBDF1-207ENST00000472390 FGD5Q6ZNL6 1462 aa34.71■■■■□ 3.15
RHBDF1-207ENST00000472390 CUX1P39880 1505 aa34.71■■■■□ 3.15
RHBDF1-207ENST00000472390 TDRD9Q8NDG6 1382 aaKnown RBP34.7■■■■□ 3.15
RHBDF1-207ENST00000472390 SOGA1O94964 1423 aa34.67■■■■□ 3.14
RHBDF1-207ENST00000472390 FBLN2P98095 1184 aa34.66■■■■□ 3.14
RHBDF1-207ENST00000472390 SNAPC4Q5SXM2 1469 aa34.58■■■■□ 3.13
RHBDF1-207ENST00000472390 ARAP1Q96P48 1450 aa34.53■■■■□ 3.12
RHBDF1-207ENST00000472390 WDR97A6NE52 1622 aa34.52■■■■□ 3.12
RHBDF1-207ENST00000472390 CYB5RLQ6IPT4 315 aa34.51■■■■□ 3.12
RHBDF1-207ENST00000472390 SUPT5HO00267 1087 aaKnown RBP34.49■■■■□ 3.11
RHBDF1-207ENST00000472390 CLASP1Q7Z460 1538 aa34.41■■■■□ 3.1
RHBDF1-207ENST00000472390 PBRM1Q86U86 1689 aa34.4■■■■□ 3.1
RHBDF1-207ENST00000472390 GRIN2BQ13224 1484 aa34.38■■■■□ 3.09
RHBDF1-207ENST00000472390 MAGI1Q96QZ7 1491 aaPredicted RBP34.36■■■■□ 3.09
RHBDF1-207ENST00000472390 CHMP7Q8WUX9 453 aaPredicted RBP34.3■■■■□ 3.08
RHBDF1-207ENST00000472390 SYNJ1O43426 1573 aa34.3■■■■□ 3.08
RHBDF1-207ENST00000472390 ABCA5Q8WWZ7 1642 aa34.28■■■■□ 3.08
RHBDF1-207ENST00000472390 SYNJ2O15056 1496 aa34.27■■■■□ 3.08
RHBDF1-207ENST00000472390 GAPVD1Q14C86 1478 aa34.27■■■■□ 3.08
RHBDF1-207ENST00000472390 ABCA10Q8WWZ4 1543 aa34.23■■■■□ 3.07
RHBDF1-207ENST00000472390 TRHP20396 242 aaPredicted RBP34.14■■■■□ 3.06
RHBDF1-207ENST00000472390 BIVM-ERCC5R4GMW8 1640 aa34.09■■■■□ 3.05
RHBDF1-207ENST00000472390 TOP2BQ02880 1626 aa34.06■■■■□ 3.04
RHBDF1-207ENST00000472390 ADAMTS12P58397 1594 aa34.04■■■■□ 3.04
RHBDF1-207ENST00000472390 WRNQ14191 1432 aaPredicted RBP eCLIP34.02■■■■□ 3.04
RHBDF1-207ENST00000472390 ERCC6L2Q5T890 1561 aa34.01■■■■□ 3.03
RHBDF1-207ENST00000472390 GRIN2AQ12879 1464 aa33.99■■■■□ 3.03
RHBDF1-207ENST00000472390 CEP170Q5SW79 1584 aa33.97■■■■□ 3.03
RHBDF1-207ENST00000472390 NUP160Q12769 1436 aa33.85■■■■□ 3.01
RHBDF1-207ENST00000472390 FHAD1B1AJZ9 1412 aa33.79■■■■□ 3
RHBDF1-207ENST00000472390 ERICH3Q5RHP9 1530 aa33.77■■■■□ 3
RHBDF1-207ENST00000472390 SHROOM2Q13796 1616 aa33.75■■■□□ 2.99
RHBDF1-207ENST00000472390 RUSC2Q8N2Y8 1516 aa33.57■■■□□ 2.96
RHBDF1-207ENST00000472390 PRG4Q92954 1404 aaPredicted RBP33.54■■■□□ 2.96
RHBDF1-207ENST00000472390 JPH4Q96JJ6 628 aa33.42■■■□□ 2.94
RHBDF1-207ENST00000472390 KIF13AQ9H1H9 1805 aa33.4■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms