RNA–Protein interactions for RNA: ENST00000472255.1

TUBBP11-201, Transcript of tubulin beta class I pseudogene 11, humanhuman

BASIC

Gene TUBBP11, Length 252 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBBP11-201ENST00000472255 NISCHQ9Y2I1 1504 aa18.16■□□□□ 0.5
TUBBP11-201ENST00000472255 ABCC9O60706 1549 aa16.54■□□□□ 0.24
TUBBP11-201ENST00000472255 CCDC180Q9P1Z9 1646 aa16.13■□□□□ 0.17
TUBBP11-201ENST00000472255 DCAF8L2P0C7V8 631 aa15.69■□□□□ 0.1
TUBBP11-201ENST00000472255 DNAJC5BQ9UF47 199 aa15.68■□□□□ 0.1
TUBBP11-201ENST00000472255 PABPN1Q86U42 306 aaKnown RBP eCLIP15.52■□□□□ 0.08
TUBBP11-201ENST00000472255 RB1CC1Q8TDY2 1594 aa15.48■□□□□ 0.07
TUBBP11-201ENST00000472255 NACADO15069 1562 aa15.33■□□□□ 0.05
TUBBP11-201ENST00000472255 UNC13AQ9UPW8 1703 aa15.17■□□□□ 0.02
TUBBP11-201ENST00000472255 BICRAQ9NZM4 1560 aa15.13■□□□□ 0.01
TUBBP11-201ENST00000472255 ZCCHC6Q5VYS8 1495 aaKnown RBP15.01□□□□□ -0.01
TUBBP11-201ENST00000472255 SCRIBQ14160 1630 aa14.98□□□□□ -0.01
TUBBP11-201ENST00000472255 MYO15BQ96JP2 1530 aa14.97□□□□□ -0.01
TUBBP11-201ENST00000472255 DCAF1Q9Y4B6 1507 aa14.82□□□□□ -0.04
TUBBP11-201ENST00000472255 CECR2Q9BXF3 1484 aa14.82□□□□□ -0.04
TUBBP11-201ENST00000472255 CC2D2AQ9P2K1 1620 aa14.81□□□□□ -0.04
TUBBP11-201ENST00000472255 EIF4G1Q04637 1599 aaKnown RBP14.73□□□□□ -0.05
TUBBP11-201ENST00000472255 SHROOM4Q9ULL8 1493 aa14.63□□□□□ -0.07
TUBBP11-201ENST00000472255 DNAJC5Q9H3Z4 198 aa14.26□□□□□ -0.13
TUBBP11-201ENST00000472255 ATAD2BQ9ULI0 1458 aa14.24□□□□□ -0.13
TUBBP11-201ENST00000472255 NCAPD3P42695 1498 aa14.21□□□□□ -0.13
TUBBP11-201ENST00000472255 ERCC6Q03468 1493 aa14.21□□□□□ -0.13
TUBBP11-201ENST00000472255 NESP48681 1621 aa14.21□□□□□ -0.13
TUBBP11-201ENST00000472255 SMARCA4P51532 1647 aa14.16□□□□□ -0.14
TUBBP11-201ENST00000472255 MROH2BQ7Z745 1585 aa14.09□□□□□ -0.15
TUBBP11-201ENST00000472255 BAZ1BQ9UIG0 1483 aaKnown RBP14.08□□□□□ -0.16
TUBBP11-201ENST00000472255 SMARCA2P51531 1590 aa14.08□□□□□ -0.16
TUBBP11-201ENST00000472255 CUX2O14529 1486 aa14.05□□□□□ -0.16
TUBBP11-201ENST00000472255 HMGXB3Q12766 1538 aa14.03□□□□□ -0.16
TUBBP11-201ENST00000472255 BAZ1AQ9NRL2 1556 aaPredicted RBP14.03□□□□□ -0.16
TUBBP11-201ENST00000472255 WIZO95785 1651 aa13.91□□□□□ -0.18
TUBBP11-201ENST00000472255 PEG3Q9GZU2 1588 aa13.9□□□□□ -0.18
TUBBP11-201ENST00000472255 THOC2Q8NI27 1593 aaKnown RBP13.89□□□□□ -0.19
TUBBP11-201ENST00000472255 KIF21AQ7Z4S6 1674 aa13.88□□□□□ -0.19
TUBBP11-201ENST00000472255 CADPSQ9ULU8 1353 aa13.84□□□□□ -0.19
TUBBP11-201ENST00000472255 LAMC3Q9Y6N6 1575 aa13.84□□□□□ -0.19
TUBBP11-201ENST00000472255 PDS5BQ9NTI5 1447 aa13.84□□□□□ -0.19
TUBBP11-201ENST00000472255 TRIM41Q8WV44 630 aa13.82□□□□□ -0.2
TUBBP11-201ENST00000472255 RSF1Q96T23 1441 aaPredicted RBP13.76□□□□□ -0.21
TUBBP11-201ENST00000472255 MRC2Q9UBG0 1479 aa13.75□□□□□ -0.21
TUBBP11-201ENST00000472255 FANCD2Q9BXW9 1451 aa13.71□□□□□ -0.21
TUBBP11-201ENST00000472255 CEP164Q9UPV0 1460 aa13.68□□□□□ -0.22
TUBBP11-201ENST00000472255 WDR62O43379 1518 aa13.67□□□□□ -0.22
TUBBP11-201ENST00000472255 CFTRP13569 1480 aa13.63□□□□□ -0.23
TUBBP11-201ENST00000472255 TOP2AP11388 1531 aaKnown RBP13.63□□□□□ -0.23
TUBBP11-201ENST00000472255 URB2Q14146 1524 aaKnown RBP13.62□□□□□ -0.23
TUBBP11-201ENST00000472255 CCDC88BA6NC98 1476 aa13.58□□□□□ -0.24
TUBBP11-201ENST00000472255 OSCARQ8IYS5 282 aa13.54□□□□□ -0.24
TUBBP11-201ENST00000472255 ZNF608Q9ULD9 1512 aaPredicted RBP13.53□□□□□ -0.24
TUBBP11-201ENST00000472255 TOPBP1Q92547 1522 aa13.43□□□□□ -0.26
TUBBP11-201ENST00000472255 FBLN2P98095 1184 aa13.42□□□□□ -0.26
TUBBP11-201ENST00000472255 AQRO60306 1485 aaKnown RBP eCLIP13.42□□□□□ -0.26
TUBBP11-201ENST00000472255 IFT140Q96RY7 1462 aa13.39□□□□□ -0.27
TUBBP11-201ENST00000472255 RAD54L2Q9Y4B4 1467 aa13.37□□□□□ -0.27
TUBBP11-201ENST00000472255 CYB5RLQ6IPT4 315 aa13.36□□□□□ -0.27
TUBBP11-201ENST00000472255 SUPT5HO00267 1087 aaKnown RBP13.35□□□□□ -0.27
TUBBP11-201ENST00000472255 TDRD9Q8NDG6 1382 aaKnown RBP13.34□□□□□ -0.27
TUBBP11-201ENST00000472255 RIMBP3CA6NJZ7 1639 aa13.34□□□□□ -0.27
TUBBP11-201ENST00000472255 RIMBP3BA6NNM3 1639 aa13.34□□□□□ -0.27
TUBBP11-201ENST00000472255 RIMBP3Q9UFD9 1639 aa13.34□□□□□ -0.27
TUBBP11-201ENST00000472255 PRDM2Q13029 1718 aa13.33□□□□□ -0.27
TUBBP11-201ENST00000472255 EIF4G3O43432 1585 aaKnown RBP13.32□□□□□ -0.28
TUBBP11-201ENST00000472255 DNMBPQ6XZF7 1577 aa13.31□□□□□ -0.28
TUBBP11-201ENST00000472255 POLA1P09884 1462 aaPredicted RBP13.29□□□□□ -0.28
TUBBP11-201ENST00000472255 ARHGEF11O15085 1522 aa13.29□□□□□ -0.28
TUBBP11-201ENST00000472255 SOGA1O94964 1423 aa13.28□□□□□ -0.28
TUBBP11-201ENST00000472255 TARBP1Q13395 1621 aaKnown RBP13.28□□□□□ -0.28
TUBBP11-201ENST00000472255 TRHP20396 242 aaPredicted RBP13.25□□□□□ -0.29
TUBBP11-201ENST00000472255 CHD1O14646 1710 aa13.24□□□□□ -0.29
TUBBP11-201ENST00000472255 ABCC8Q09428 1581 aa13.24□□□□□ -0.29
TUBBP11-201ENST00000472255 FGD5Q6ZNL6 1462 aa13.23□□□□□ -0.29
TUBBP11-201ENST00000472255 CUX1P39880 1505 aa13.22□□□□□ -0.29
TUBBP11-201ENST00000472255 SNAPC4Q5SXM2 1469 aa13.21□□□□□ -0.3
TUBBP11-201ENST00000472255 CHMP7Q8WUX9 453 aaPredicted RBP13.2□□□□□ -0.3
TUBBP11-201ENST00000472255 ARAP1Q96P48 1450 aa13.19□□□□□ -0.3
TUBBP11-201ENST00000472255 GRIN2BQ13224 1484 aa13.09□□□□□ -0.31
TUBBP11-201ENST00000472255 GAPVD1Q14C86 1478 aa13.07□□□□□ -0.32
TUBBP11-201ENST00000472255 CLASP1Q7Z460 1538 aa13.06□□□□□ -0.32
TUBBP11-201ENST00000472255 SYNJ2O15056 1496 aa13.04□□□□□ -0.32
TUBBP11-201ENST00000472255 MAGI1Q96QZ7 1491 aaPredicted RBP13.04□□□□□ -0.32
TUBBP11-201ENST00000472255 ERCC6L2Q5T890 1561 aa13.03□□□□□ -0.32
TUBBP11-201ENST00000472255 SYNJ1O43426 1573 aa13.02□□□□□ -0.33
TUBBP11-201ENST00000472255 PBRM1Q86U86 1689 aa13□□□□□ -0.33
TUBBP11-201ENST00000472255 WDR97A6NE52 1622 aa13□□□□□ -0.33
TUBBP11-201ENST00000472255 ABCA10Q8WWZ4 1543 aa12.99□□□□□ -0.33
TUBBP11-201ENST00000472255 WRNQ14191 1432 aaPredicted RBP eCLIP12.96□□□□□ -0.33
TUBBP11-201ENST00000472255 ABCA5Q8WWZ7 1642 aa12.96□□□□□ -0.33
TUBBP11-201ENST00000472255 GRIN2AQ12879 1464 aa12.94□□□□□ -0.34
TUBBP11-201ENST00000472255 CEP170Q5SW79 1584 aa12.93□□□□□ -0.34
TUBBP11-201ENST00000472255 TTBK1Q5TCY1 1321 aaPredicted RBP12.9□□□□□ -0.34
TUBBP11-201ENST00000472255 ADAMTS12P58397 1594 aa12.9□□□□□ -0.35
TUBBP11-201ENST00000472255 TOP2BQ02880 1626 aa12.88□□□□□ -0.35
TUBBP11-201ENST00000472255 FHAD1B1AJZ9 1412 aa12.87□□□□□ -0.35
TUBBP11-201ENST00000472255 NUP160Q12769 1436 aa12.87□□□□□ -0.35
TUBBP11-201ENST00000472255 BIVM-ERCC5R4GMW8 1640 aa12.86□□□□□ -0.35
TUBBP11-201ENST00000472255 JPH4Q96JJ6 628 aa12.85□□□□□ -0.35
TUBBP11-201ENST00000472255 PRG4Q92954 1404 aaPredicted RBP12.85□□□□□ -0.35
TUBBP11-201ENST00000472255 AEBP2Q6ZN18 517 aaPredicted RBP12.84□□□□□ -0.35
TUBBP11-201ENST00000472255 ERICH3Q5RHP9 1530 aa12.78□□□□□ -0.36
TUBBP11-201ENST00000472255 FAM69CQ0P6D2 419 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms