RNA–Protein interactions for RNA: ENST00000472057.1

AP1B1-209, Transcript of adaptor related protein complex 1 subunit beta 1, humanhuman

TSL 3

Gene AP1B1, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1B1-209ENST00000472057 NISCHQ9Y2I1 1504 aa33.56■■■□□ 2.96
AP1B1-209ENST00000472057 CCDC180Q9P1Z9 1646 aa29.8■■■□□ 2.36
AP1B1-209ENST00000472057 ABCC9O60706 1549 aa29.25■■■□□ 2.27
AP1B1-209ENST00000472057 DCAF8L2P0C7V8 631 aa28.22■■■□□ 2.11
AP1B1-209ENST00000472057 RB1CC1Q8TDY2 1594 aa28.11■■■□□ 2.09
AP1B1-209ENST00000472057 NACADO15069 1562 aa28.06■■■□□ 2.08
AP1B1-209ENST00000472057 ZCCHC6Q5VYS8 1495 aaKnown RBP27.93■■■□□ 2.06
AP1B1-209ENST00000472057 MYO15BQ96JP2 1530 aa27.85■■■□□ 2.05
AP1B1-209ENST00000472057 DCAF1Q9Y4B6 1507 aa27.73■■■□□ 2.03
AP1B1-209ENST00000472057 UNC13AQ9UPW8 1703 aa27.4■■□□□ 1.98
AP1B1-209ENST00000472057 PABPN1Q86U42 306 aaKnown RBP eCLIP27.38■■□□□ 1.97
AP1B1-209ENST00000472057 SCRIBQ14160 1630 aa27.25■■□□□ 1.95
AP1B1-209ENST00000472057 BICRAQ9NZM4 1560 aa27.19■■□□□ 1.94
AP1B1-209ENST00000472057 SHROOM4Q9ULL8 1493 aa26.93■■□□□ 1.9
AP1B1-209ENST00000472057 DNAJC5BQ9UF47 199 aa26.83■■□□□ 1.89
AP1B1-209ENST00000472057 EIF4G1Q04637 1599 aaKnown RBP26.51■■□□□ 1.83
AP1B1-209ENST00000472057 CC2D2AQ9P2K1 1620 aa26.42■■□□□ 1.82
AP1B1-209ENST00000472057 CECR2Q9BXF3 1484 aa26.28■■□□□ 1.8
AP1B1-209ENST00000472057 SMARCA4P51532 1647 aa26.03■■□□□ 1.76
AP1B1-209ENST00000472057 BAZ1AQ9NRL2 1556 aaPredicted RBP26.03■■□□□ 1.76
AP1B1-209ENST00000472057 ATAD2BQ9ULI0 1458 aa25.91■■□□□ 1.74
AP1B1-209ENST00000472057 NCAPD3P42695 1498 aa25.89■■□□□ 1.73
AP1B1-209ENST00000472057 SMARCA2P51531 1590 aa25.89■■□□□ 1.73
AP1B1-209ENST00000472057 MROH2BQ7Z745 1585 aa25.86■■□□□ 1.73
AP1B1-209ENST00000472057 HMGXB3Q12766 1538 aa25.74■■□□□ 1.71
AP1B1-209ENST00000472057 PEG3Q9GZU2 1588 aa25.73■■□□□ 1.71
AP1B1-209ENST00000472057 BAZ1BQ9UIG0 1483 aaKnown RBP25.72■■□□□ 1.71
AP1B1-209ENST00000472057 WIZO95785 1651 aa25.58■■□□□ 1.69
AP1B1-209ENST00000472057 RSF1Q96T23 1441 aaPredicted RBP25.58■■□□□ 1.69
AP1B1-209ENST00000472057 TOP2AP11388 1531 aaKnown RBP25.32■■□□□ 1.64
AP1B1-209ENST00000472057 NESP48681 1621 aa25.28■■□□□ 1.64
AP1B1-209ENST00000472057 ERCC6Q03468 1493 aa25.25■■□□□ 1.63
AP1B1-209ENST00000472057 LAMC3Q9Y6N6 1575 aa25.2■■□□□ 1.62
AP1B1-209ENST00000472057 CADPSQ9ULU8 1353 aa25.18■■□□□ 1.62
AP1B1-209ENST00000472057 PDS5BQ9NTI5 1447 aa25.1■■□□□ 1.61
AP1B1-209ENST00000472057 SUPT5HO00267 1087 aaKnown RBP25.06■■□□□ 1.6
AP1B1-209ENST00000472057 CCDC88BA6NC98 1476 aa25.04■■□□□ 1.6
AP1B1-209ENST00000472057 CFTRP13569 1480 aa24.99■■□□□ 1.59
AP1B1-209ENST00000472057 KIF21AQ7Z4S6 1674 aa24.95■■□□□ 1.58
AP1B1-209ENST00000472057 CUX2O14529 1486 aa24.91■■□□□ 1.58
AP1B1-209ENST00000472057 FANCD2Q9BXW9 1451 aa24.88■■□□□ 1.57
AP1B1-209ENST00000472057 CEP164Q9UPV0 1460 aa24.85■■□□□ 1.57
AP1B1-209ENST00000472057 THOC2Q8NI27 1593 aaKnown RBP24.84■■□□□ 1.57
AP1B1-209ENST00000472057 MRC2Q9UBG0 1479 aa24.81■■□□□ 1.56
AP1B1-209ENST00000472057 PRDM2Q13029 1718 aa24.75■■□□□ 1.55
AP1B1-209ENST00000472057 WDR62O43379 1518 aa24.68■■□□□ 1.54
AP1B1-209ENST00000472057 URB2Q14146 1524 aaKnown RBP24.6■■□□□ 1.53
AP1B1-209ENST00000472057 ABCC8Q09428 1581 aa24.49■■□□□ 1.51
AP1B1-209ENST00000472057 TOPBP1Q92547 1522 aa24.46■■□□□ 1.51
AP1B1-209ENST00000472057 DNMBPQ6XZF7 1577 aa24.42■■□□□ 1.5
AP1B1-209ENST00000472057 IFT140Q96RY7 1462 aa24.32■■□□□ 1.48
AP1B1-209ENST00000472057 CUX1P39880 1505 aa24.26■■□□□ 1.47
AP1B1-209ENST00000472057 POLA1P09884 1462 aaPredicted RBP24.26■■□□□ 1.47
AP1B1-209ENST00000472057 ZNF608Q9ULD9 1512 aaPredicted RBP24.2■■□□□ 1.47
AP1B1-209ENST00000472057 FGD5Q6ZNL6 1462 aa24.2■■□□□ 1.47
AP1B1-209ENST00000472057 SOGA1O94964 1423 aa24.2■■□□□ 1.46
AP1B1-209ENST00000472057 DNAJC5Q9H3Z4 198 aa24.2■■□□□ 1.46
AP1B1-209ENST00000472057 RAD54L2Q9Y4B4 1467 aa24.17■■□□□ 1.46
AP1B1-209ENST00000472057 TARBP1Q13395 1621 aaKnown RBP24.16■■□□□ 1.46
AP1B1-209ENST00000472057 WRNQ14191 1432 aaPredicted RBP eCLIP24.15■■□□□ 1.46
AP1B1-209ENST00000472057 AQRO60306 1485 aaKnown RBP eCLIP24.09■■□□□ 1.45
AP1B1-209ENST00000472057 EIF4G3O43432 1585 aaKnown RBP24.08■■□□□ 1.45
AP1B1-209ENST00000472057 TDRD9Q8NDG6 1382 aaKnown RBP24.07■■□□□ 1.44
AP1B1-209ENST00000472057 TOP2BQ02880 1626 aa24.05■■□□□ 1.44
AP1B1-209ENST00000472057 SYNJ1O43426 1573 aa24.04■■□□□ 1.44
AP1B1-209ENST00000472057 BIVM-ERCC5R4GMW8 1640 aa24.02■■□□□ 1.44
AP1B1-209ENST00000472057 WDR97A6NE52 1622 aa23.97■■□□□ 1.43
AP1B1-209ENST00000472057 OSCARQ8IYS5 282 aa23.97■■□□□ 1.43
AP1B1-209ENST00000472057 ABCA10Q8WWZ4 1543 aa23.95■■□□□ 1.43
AP1B1-209ENST00000472057 FBLN2P98095 1184 aa23.91■■□□□ 1.42
AP1B1-209ENST00000472057 GAPVD1Q14C86 1478 aa23.91■■□□□ 1.42
AP1B1-209ENST00000472057 GRIN2BQ13224 1484 aa23.9■■□□□ 1.42
AP1B1-209ENST00000472057 SNAPC4Q5SXM2 1469 aa23.86■■□□□ 1.41
AP1B1-209ENST00000472057 ABCA5Q8WWZ7 1642 aa23.83■■□□□ 1.41
AP1B1-209ENST00000472057 MAGI1Q96QZ7 1491 aaPredicted RBP23.82■■□□□ 1.4
AP1B1-209ENST00000472057 CHMP7Q8WUX9 453 aaPredicted RBP23.81■■□□□ 1.4
AP1B1-209ENST00000472057 PBRM1Q86U86 1689 aa23.79■■□□□ 1.4
AP1B1-209ENST00000472057 CHD1O14646 1710 aa23.79■■□□□ 1.4
AP1B1-209ENST00000472057 SYNJ2O15056 1496 aa23.74■■□□□ 1.39
AP1B1-209ENST00000472057 ERICH3Q5RHP9 1530 aa23.67■■□□□ 1.38
AP1B1-209ENST00000472057 KIF27Q86VH2 1401 aa23.67■■□□□ 1.38
AP1B1-209ENST00000472057 TRIM41Q8WV44 630 aa23.66■■□□□ 1.38
AP1B1-209ENST00000472057 FHAD1B1AJZ9 1412 aa23.63■■□□□ 1.37
AP1B1-209ENST00000472057 ADAMTS12P58397 1594 aa23.62■■□□□ 1.37
AP1B1-209ENST00000472057 GRIN2AQ12879 1464 aa23.57■■□□□ 1.36
AP1B1-209ENST00000472057 IGF1RP08069 1367 aa23.55■■□□□ 1.36
AP1B1-209ENST00000472057 CLASP1Q7Z460 1538 aa23.51■■□□□ 1.35
AP1B1-209ENST00000472057 ARHGEF11O15085 1522 aa23.5■■□□□ 1.35
AP1B1-209ENST00000472057 RIMBP3CA6NJZ7 1639 aa23.49■■□□□ 1.35
AP1B1-209ENST00000472057 RIMBP3BA6NNM3 1639 aa23.49■■□□□ 1.35
AP1B1-209ENST00000472057 RIMBP3Q9UFD9 1639 aa23.49■■□□□ 1.35
AP1B1-209ENST00000472057 CUL7Q14999 1698 aa23.45■■□□□ 1.34
AP1B1-209ENST00000472057 NUP160Q12769 1436 aa23.45■■□□□ 1.34
AP1B1-209ENST00000472057 CARMIL1Q5VZK9 1371 aa23.43■■□□□ 1.34
AP1B1-209ENST00000472057 CEP170Q5SW79 1584 aa23.43■■□□□ 1.34
AP1B1-209ENST00000472057 RUSC2Q8N2Y8 1516 aa23.41■■□□□ 1.34
AP1B1-209ENST00000472057 CYB5RLQ6IPT4 315 aa23.38■■□□□ 1.33
AP1B1-209ENST00000472057 CHIC1Q5VXU3 224 aa23.32■■□□□ 1.32
AP1B1-209ENST00000472057 ARAP1Q96P48 1450 aa23.3■■□□□ 1.32
AP1B1-209ENST00000472057 JPH4Q96JJ6 628 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms