RNA–Protein interactions for RNA: ENST00000471825.1

PITPNB-208, Transcript of phosphatidylinositol transfer protein beta, humanhuman

TSL 2

Gene PITPNB, Length 766 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNB-208ENST00000471825 NISCHQ9Y2I1 1504 aa49.49■■■■■ 5.51
PITPNB-208ENST00000471825 ABCC9O60706 1549 aa44.86■■■■■ 4.77
PITPNB-208ENST00000471825 CCDC180Q9P1Z9 1646 aa44.39■■■■■ 4.7
PITPNB-208ENST00000471825 RB1CC1Q8TDY2 1594 aa42.45■■■■■ 4.39
PITPNB-208ENST00000471825 DNAJC5BQ9UF47 199 aa42.43■■■■■ 4.38
PITPNB-208ENST00000471825 NACADO15069 1562 aa42.1■■■■■ 4.33
PITPNB-208ENST00000471825 DCAF8L2P0C7V8 631 aa42.04■■■■■ 4.32
PITPNB-208ENST00000471825 PABPN1Q86U42 306 aaKnown RBP eCLIP41.81■■■■■ 4.28
PITPNB-208ENST00000471825 UNC13AQ9UPW8 1703 aa41.49■■■■■ 4.23
PITPNB-208ENST00000471825 MYO15BQ96JP2 1530 aa41.39■■■■■ 4.22
PITPNB-208ENST00000471825 BICRAQ9NZM4 1560 aa41.3■■■■■ 4.2
PITPNB-208ENST00000471825 ZCCHC6Q5VYS8 1495 aaKnown RBP40.94■■■■■ 4.14
PITPNB-208ENST00000471825 DCAF1Q9Y4B6 1507 aa40.78■■■■■ 4.12
PITPNB-208ENST00000471825 SHROOM4Q9ULL8 1493 aa40.58■■■■■ 4.09
PITPNB-208ENST00000471825 SCRIBQ14160 1630 aa40.57■■■■■ 4.09
PITPNB-208ENST00000471825 CC2D2AQ9P2K1 1620 aa40.45■■■■■ 4.07
PITPNB-208ENST00000471825 CECR2Q9BXF3 1484 aa40.4■■■■■ 4.06
PITPNB-208ENST00000471825 EIF4G1Q04637 1599 aaKnown RBP40.28■■■■■ 4.04
PITPNB-208ENST00000471825 DNAJC5Q9H3Z4 198 aa39.08■■■■□ 3.85
PITPNB-208ENST00000471825 NCAPD3P42695 1498 aa38.92■■■■□ 3.82
PITPNB-208ENST00000471825 ATAD2BQ9ULI0 1458 aa38.79■■■■□ 3.8
PITPNB-208ENST00000471825 ERCC6Q03468 1493 aa38.71■■■■□ 3.79
PITPNB-208ENST00000471825 CUX2O14529 1486 aa38.67■■■■□ 3.78
PITPNB-208ENST00000471825 SMARCA4P51532 1647 aa38.63■■■■□ 3.78
PITPNB-208ENST00000471825 SMARCA2P51531 1590 aa38.59■■■■□ 3.77
PITPNB-208ENST00000471825 HMGXB3Q12766 1538 aa38.54■■■■□ 3.76
PITPNB-208ENST00000471825 NESP48681 1621 aa38.48■■■■□ 3.75
PITPNB-208ENST00000471825 BAZ1AQ9NRL2 1556 aaPredicted RBP38.39■■■■□ 3.74
PITPNB-208ENST00000471825 BAZ1BQ9UIG0 1483 aaKnown RBP38.37■■■■□ 3.73
PITPNB-208ENST00000471825 PEG3Q9GZU2 1588 aa38.23■■■■□ 3.71
PITPNB-208ENST00000471825 MROH2BQ7Z745 1585 aa38.18■■■■□ 3.7
PITPNB-208ENST00000471825 THOC2Q8NI27 1593 aaKnown RBP38.03■■■■□ 3.68
PITPNB-208ENST00000471825 LAMC3Q9Y6N6 1575 aa38.03■■■■□ 3.68
PITPNB-208ENST00000471825 PDS5BQ9NTI5 1447 aa37.87■■■■□ 3.65
PITPNB-208ENST00000471825 KIF21AQ7Z4S6 1674 aa37.86■■■■□ 3.65
PITPNB-208ENST00000471825 CADPSQ9ULU8 1353 aa37.76■■■■□ 3.64
PITPNB-208ENST00000471825 WIZO95785 1651 aa37.68■■■■□ 3.62
PITPNB-208ENST00000471825 MRC2Q9UBG0 1479 aa37.57■■■■□ 3.6
PITPNB-208ENST00000471825 WDR62O43379 1518 aa37.46■■■■□ 3.59
PITPNB-208ENST00000471825 CEP164Q9UPV0 1460 aa37.36■■■■□ 3.57
PITPNB-208ENST00000471825 FANCD2Q9BXW9 1451 aa37.33■■■■□ 3.57
PITPNB-208ENST00000471825 TRIM41Q8WV44 630 aa37.31■■■■□ 3.56
PITPNB-208ENST00000471825 RSF1Q96T23 1441 aaPredicted RBP37.29■■■■□ 3.56
PITPNB-208ENST00000471825 CFTRP13569 1480 aa37.25■■■■□ 3.55
PITPNB-208ENST00000471825 TOP2AP11388 1531 aaKnown RBP37.14■■■■□ 3.54
PITPNB-208ENST00000471825 URB2Q14146 1524 aaKnown RBP37.05■■■■□ 3.52
PITPNB-208ENST00000471825 OSCARQ8IYS5 282 aa36.96■■■■□ 3.51
PITPNB-208ENST00000471825 CCDC88BA6NC98 1476 aa36.8■■■■□ 3.48
PITPNB-208ENST00000471825 PRDM2Q13029 1718 aa36.71■■■■□ 3.47
PITPNB-208ENST00000471825 ZNF608Q9ULD9 1512 aaPredicted RBP36.67■■■■□ 3.46
PITPNB-208ENST00000471825 IFT140Q96RY7 1462 aa36.62■■■■□ 3.45
PITPNB-208ENST00000471825 TOPBP1Q92547 1522 aa36.58■■■■□ 3.45
PITPNB-208ENST00000471825 RIMBP3CA6NJZ7 1639 aa36.45■■■■□ 3.43
PITPNB-208ENST00000471825 RIMBP3BA6NNM3 1639 aa36.45■■■■□ 3.43
PITPNB-208ENST00000471825 RIMBP3Q9UFD9 1639 aa36.45■■■■□ 3.43
PITPNB-208ENST00000471825 ABCC8Q09428 1581 aa36.4■■■■□ 3.42
PITPNB-208ENST00000471825 DNMBPQ6XZF7 1577 aa36.37■■■■□ 3.41
PITPNB-208ENST00000471825 EIF4G3O43432 1585 aaKnown RBP36.36■■■■□ 3.41
PITPNB-208ENST00000471825 ARHGEF11O15085 1522 aa36.32■■■■□ 3.4
PITPNB-208ENST00000471825 AQRO60306 1485 aaKnown RBP eCLIP36.31■■■■□ 3.4
PITPNB-208ENST00000471825 TARBP1Q13395 1621 aaKnown RBP36.25■■■■□ 3.39
PITPNB-208ENST00000471825 POLA1P09884 1462 aaPredicted RBP36.19■■■■□ 3.38
PITPNB-208ENST00000471825 CYB5RLQ6IPT4 315 aa36.17■■■■□ 3.38
PITPNB-208ENST00000471825 FBLN2P98095 1184 aa36.16■■■■□ 3.38
PITPNB-208ENST00000471825 CHD1O14646 1710 aa36.13■■■■□ 3.37
PITPNB-208ENST00000471825 RAD54L2Q9Y4B4 1467 aa36.12■■■■□ 3.37
PITPNB-208ENST00000471825 TDRD9Q8NDG6 1382 aaKnown RBP36.06■■■■□ 3.36
PITPNB-208ENST00000471825 SOGA1O94964 1423 aa36.05■■■■□ 3.36
PITPNB-208ENST00000471825 ARAP1Q96P48 1450 aa35.98■■■■□ 3.35
PITPNB-208ENST00000471825 FGD5Q6ZNL6 1462 aa35.93■■■■□ 3.34
PITPNB-208ENST00000471825 SNAPC4Q5SXM2 1469 aa35.89■■■■□ 3.34
PITPNB-208ENST00000471825 CUX1P39880 1505 aa35.88■■■■□ 3.33
PITPNB-208ENST00000471825 TRHP20396 242 aaPredicted RBP35.84■■■■□ 3.33
PITPNB-208ENST00000471825 CHMP7Q8WUX9 453 aaPredicted RBP35.81■■■■□ 3.32
PITPNB-208ENST00000471825 WDR97A6NE52 1622 aa35.75■■■■□ 3.31
PITPNB-208ENST00000471825 CLASP1Q7Z460 1538 aa35.73■■■■□ 3.31
PITPNB-208ENST00000471825 GRIN2BQ13224 1484 aa35.73■■■■□ 3.31
PITPNB-208ENST00000471825 MAGI1Q96QZ7 1491 aaPredicted RBP35.73■■■■□ 3.31
PITPNB-208ENST00000471825 SYNJ1O43426 1573 aa35.65■■■■□ 3.3
PITPNB-208ENST00000471825 SYNJ2O15056 1496 aa35.63■■■■□ 3.29
PITPNB-208ENST00000471825 GAPVD1Q14C86 1478 aa35.58■■■■□ 3.29
PITPNB-208ENST00000471825 SUPT5HO00267 1087 aaKnown RBP35.53■■■■□ 3.28
PITPNB-208ENST00000471825 PBRM1Q86U86 1689 aa35.5■■■■□ 3.27
PITPNB-208ENST00000471825 ABCA10Q8WWZ4 1543 aa35.48■■■■□ 3.27
PITPNB-208ENST00000471825 ABCA5Q8WWZ7 1642 aa35.42■■■■□ 3.26
PITPNB-208ENST00000471825 WRNQ14191 1432 aaPredicted RBP eCLIP35.3■■■■□ 3.24
PITPNB-208ENST00000471825 GRIN2AQ12879 1464 aa35.27■■■■□ 3.24
PITPNB-208ENST00000471825 ERCC6L2Q5T890 1561 aa35.24■■■■□ 3.23
PITPNB-208ENST00000471825 ADAMTS12P58397 1594 aa35.19■■■■□ 3.22
PITPNB-208ENST00000471825 NUP160Q12769 1436 aa35.17■■■■□ 3.22
PITPNB-208ENST00000471825 CEP170Q5SW79 1584 aa35.17■■■■□ 3.22
PITPNB-208ENST00000471825 TOP2BQ02880 1626 aa35.16■■■■□ 3.22
PITPNB-208ENST00000471825 BIVM-ERCC5R4GMW8 1640 aa35.14■■■■□ 3.22
PITPNB-208ENST00000471825 FHAD1B1AJZ9 1412 aa35.11■■■■□ 3.21
PITPNB-208ENST00000471825 ERICH3Q5RHP9 1530 aa35■■■■□ 3.19
PITPNB-208ENST00000471825 SHROOM2Q13796 1616 aa34.99■■■■□ 3.19
PITPNB-208ENST00000471825 AEBP2Q6ZN18 517 aaPredicted RBP34.96■■■■□ 3.19
PITPNB-208ENST00000471825 PRG4Q92954 1404 aaPredicted RBP34.89■■■■□ 3.18
PITPNB-208ENST00000471825 JPH4Q96JJ6 628 aa34.88■■■■□ 3.17
PITPNB-208ENST00000471825 RUSC2Q8N2Y8 1516 aa34.69■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms