RNA–Protein interactions for RNA: ENST00000471772.6

RPS27A-207, Transcript of ribosomal protein S27a, humanhuman

TSL 2

Gene RPS27A, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27A-207ENST00000471772 NISCHQ9Y2I1 1504 aa19.14■□□□□ 0.65
RPS27A-207ENST00000471772 CCDC180Q9P1Z9 1646 aa16.95■□□□□ 0.3
RPS27A-207ENST00000471772 ABCC9O60706 1549 aa16.5■□□□□ 0.23
RPS27A-207ENST00000471772 DCAF8L2P0C7V8 631 aa16■□□□□ 0.15
RPS27A-207ENST00000471772 NACADO15069 1562 aa15.96■□□□□ 0.15
RPS27A-207ENST00000471772 RB1CC1Q8TDY2 1594 aa15.94■□□□□ 0.14
RPS27A-207ENST00000471772 ZCCHC6Q5VYS8 1495 aaKnown RBP15.92■□□□□ 0.14
RPS27A-207ENST00000471772 MYO15BQ96JP2 1530 aa15.92■□□□□ 0.14
RPS27A-207ENST00000471772 DCAF1Q9Y4B6 1507 aa15.86■□□□□ 0.13
RPS27A-207ENST00000471772 UNC13AQ9UPW8 1703 aa15.54■□□□□ 0.08
RPS27A-207ENST00000471772 PABPN1Q86U42 306 aaKnown RBP eCLIP15.48■□□□□ 0.07
RPS27A-207ENST00000471772 BICRAQ9NZM4 1560 aa15.43■□□□□ 0.06
RPS27A-207ENST00000471772 SCRIBQ14160 1630 aa15.42■□□□□ 0.06
RPS27A-207ENST00000471772 SHROOM4Q9ULL8 1493 aa15.33■□□□□ 0.04
RPS27A-207ENST00000471772 DNAJC5BQ9UF47 199 aa15.15■□□□□ 0.02
RPS27A-207ENST00000471772 EIF4G1Q04637 1599 aaKnown RBP15.02□□□□□ -0.01
RPS27A-207ENST00000471772 CC2D2AQ9P2K1 1620 aa14.94□□□□□ -0.02
RPS27A-207ENST00000471772 CECR2Q9BXF3 1484 aa14.88□□□□□ -0.03
RPS27A-207ENST00000471772 BAZ1AQ9NRL2 1556 aaPredicted RBP14.82□□□□□ -0.04
RPS27A-207ENST00000471772 SMARCA4P51532 1647 aa14.8□□□□□ -0.04
RPS27A-207ENST00000471772 NCAPD3P42695 1498 aa14.76□□□□□ -0.05
RPS27A-207ENST00000471772 ATAD2BQ9ULI0 1458 aa14.74□□□□□ -0.05
RPS27A-207ENST00000471772 SMARCA2P51531 1590 aa14.73□□□□□ -0.05
RPS27A-207ENST00000471772 MROH2BQ7Z745 1585 aa14.72□□□□□ -0.05
RPS27A-207ENST00000471772 PEG3Q9GZU2 1588 aa14.68□□□□□ -0.06
RPS27A-207ENST00000471772 HMGXB3Q12766 1538 aa14.63□□□□□ -0.07
RPS27A-207ENST00000471772 RSF1Q96T23 1441 aaPredicted RBP14.62□□□□□ -0.07
RPS27A-207ENST00000471772 BAZ1BQ9UIG0 1483 aaKnown RBP14.6□□□□□ -0.07
RPS27A-207ENST00000471772 WIZO95785 1651 aa14.55□□□□□ -0.08
RPS27A-207ENST00000471772 TOP2AP11388 1531 aaKnown RBP14.41□□□□□ -0.1
RPS27A-207ENST00000471772 CADPSQ9ULU8 1353 aa14.33□□□□□ -0.12
RPS27A-207ENST00000471772 SUPT5HO00267 1087 aaKnown RBP14.31□□□□□ -0.12
RPS27A-207ENST00000471772 LAMC3Q9Y6N6 1575 aa14.3□□□□□ -0.12
RPS27A-207ENST00000471772 NESP48681 1621 aa14.3□□□□□ -0.12
RPS27A-207ENST00000471772 CCDC88BA6NC98 1476 aa14.27□□□□□ -0.12
RPS27A-207ENST00000471772 PDS5BQ9NTI5 1447 aa14.25□□□□□ -0.13
RPS27A-207ENST00000471772 CFTRP13569 1480 aa14.24□□□□□ -0.13
RPS27A-207ENST00000471772 ERCC6Q03468 1493 aa14.24□□□□□ -0.13
RPS27A-207ENST00000471772 FANCD2Q9BXW9 1451 aa14.12□□□□□ -0.15
RPS27A-207ENST00000471772 KIF21AQ7Z4S6 1674 aa14.11□□□□□ -0.15
RPS27A-207ENST00000471772 PRDM2Q13029 1718 aa14.09□□□□□ -0.15
RPS27A-207ENST00000471772 CUX2O14529 1486 aa14.08□□□□□ -0.16
RPS27A-207ENST00000471772 CEP164Q9UPV0 1460 aa14.08□□□□□ -0.16
RPS27A-207ENST00000471772 MRC2Q9UBG0 1479 aa14.06□□□□□ -0.16
RPS27A-207ENST00000471772 THOC2Q8NI27 1593 aaKnown RBP14.04□□□□□ -0.16
RPS27A-207ENST00000471772 WDR62O43379 1518 aa13.99□□□□□ -0.17
RPS27A-207ENST00000471772 ABCC8Q09428 1581 aa13.96□□□□□ -0.17
RPS27A-207ENST00000471772 URB2Q14146 1524 aaKnown RBP13.95□□□□□ -0.18
RPS27A-207ENST00000471772 TOPBP1Q92547 1522 aa13.9□□□□□ -0.19
RPS27A-207ENST00000471772 DNMBPQ6XZF7 1577 aa13.88□□□□□ -0.19
RPS27A-207ENST00000471772 IFT140Q96RY7 1462 aa13.81□□□□□ -0.2
RPS27A-207ENST00000471772 CUX1P39880 1505 aa13.8□□□□□ -0.2
RPS27A-207ENST00000471772 POLA1P09884 1462 aaPredicted RBP13.78□□□□□ -0.2
RPS27A-207ENST00000471772 SOGA1O94964 1423 aa13.77□□□□□ -0.21
RPS27A-207ENST00000471772 WRNQ14191 1432 aaPredicted RBP eCLIP13.77□□□□□ -0.216e-18■□□□□ 8
RPS27A-207ENST00000471772 FGD5Q6ZNL6 1462 aa13.74□□□□□ -0.21
RPS27A-207ENST00000471772 TARBP1Q13395 1621 aaKnown RBP13.73□□□□□ -0.21
RPS27A-207ENST00000471772 TOP2BQ02880 1626 aa13.72□□□□□ -0.21
RPS27A-207ENST00000471772 RAD54L2Q9Y4B4 1467 aa13.71□□□□□ -0.21
RPS27A-207ENST00000471772 ZNF608Q9ULD9 1512 aaPredicted RBP13.7□□□□□ -0.22
RPS27A-207ENST00000471772 BIVM-ERCC5R4GMW8 1640 aa13.69□□□□□ -0.22
RPS27A-207ENST00000471772 SYNJ1O43426 1573 aa13.67□□□□□ -0.22
RPS27A-207ENST00000471772 TDRD9Q8NDG6 1382 aaKnown RBP13.67□□□□□ -0.22
RPS27A-207ENST00000471772 AQRO60306 1485 aaKnown RBP eCLIP13.67□□□□□ -0.225e-10■■■■■ 62.7
RPS27A-207ENST00000471772 WDR97A6NE52 1622 aa13.65□□□□□ -0.22
RPS27A-207ENST00000471772 ABCA10Q8WWZ4 1543 aa13.64□□□□□ -0.23
RPS27A-207ENST00000471772 DNAJC5Q9H3Z4 198 aa13.64□□□□□ -0.23
RPS27A-207ENST00000471772 EIF4G3O43432 1585 aaKnown RBP13.62□□□□□ -0.23
RPS27A-207ENST00000471772 OSCARQ8IYS5 282 aa13.6□□□□□ -0.23
RPS27A-207ENST00000471772 GAPVD1Q14C86 1478 aa13.59□□□□□ -0.23
RPS27A-207ENST00000471772 GRIN2BQ13224 1484 aa13.58□□□□□ -0.24
RPS27A-207ENST00000471772 TRIM41Q8WV44 630 aa13.55□□□□□ -0.24
RPS27A-207ENST00000471772 ABCA5Q8WWZ7 1642 aa13.53□□□□□ -0.24
RPS27A-207ENST00000471772 MAGI1Q96QZ7 1491 aaPredicted RBP13.53□□□□□ -0.24
RPS27A-207ENST00000471772 FBLN2P98095 1184 aa13.52□□□□□ -0.25
RPS27A-207ENST00000471772 CHMP7Q8WUX9 453 aaPredicted RBP13.52□□□□□ -0.25
RPS27A-207ENST00000471772 SNAPC4Q5SXM2 1469 aa13.5□□□□□ -0.25
RPS27A-207ENST00000471772 KIF27Q86VH2 1401 aa13.5□□□□□ -0.25
RPS27A-207ENST00000471772 PBRM1Q86U86 1689 aa13.49□□□□□ -0.25
RPS27A-207ENST00000471772 ERICH3Q5RHP9 1530 aa13.49□□□□□ -0.25
RPS27A-207ENST00000471772 SYNJ2O15056 1496 aa13.48□□□□□ -0.25
RPS27A-207ENST00000471772 IGF1RP08069 1367 aa13.46□□□□□ -0.25
RPS27A-207ENST00000471772 FHAD1B1AJZ9 1412 aa13.45□□□□□ -0.26
RPS27A-207ENST00000471772 CHD1O14646 1710 aa13.44□□□□□ -0.26
RPS27A-207ENST00000471772 CHIC1Q5VXU3 224 aa13.44□□□□□ -0.26
RPS27A-207ENST00000471772 ADAMTS12P58397 1594 aa13.38□□□□□ -0.27
RPS27A-207ENST00000471772 GRIN2AQ12879 1464 aa13.38□□□□□ -0.27
RPS27A-207ENST00000471772 CARMIL1Q5VZK9 1371 aa13.37□□□□□ -0.27
RPS27A-207ENST00000471772 RUSC2Q8N2Y8 1516 aa13.35□□□□□ -0.27
RPS27A-207ENST00000471772 CUL7Q14999 1698 aa13.35□□□□□ -0.27
RPS27A-207ENST00000471772 NUP160Q12769 1436 aa13.34□□□□□ -0.27
RPS27A-207ENST00000471772 CLASP1Q7Z460 1538 aa13.31□□□□□ -0.28
RPS27A-207ENST00000471772 CSRNP3Q8WYN3 585 aa13.31□□□□□ -0.28
RPS27A-207ENST00000471772 EEA1Q15075 1411 aa13.3□□□□□ -0.28
RPS27A-207ENST00000471772 RAPGEF2Q9Y4G8 1499 aa13.28□□□□□ -0.28
RPS27A-207ENST00000471772 CEP170Q5SW79 1584 aa13.28□□□□□ -0.28
RPS27A-207ENST00000471772 JPH4Q96JJ6 628 aa13.27□□□□□ -0.29
RPS27A-207ENST00000471772 ARHGEF11O15085 1522 aa13.26□□□□□ -0.29
RPS27A-207ENST00000471772 KIAA0586Q9BVV6 1533 aa13.25□□□□□ -0.29
RPS27A-207ENST00000471772 RIMBP3CA6NJZ7 1639 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms