RNA–Protein interactions for RNA: ENST00000471705.1

SARS-204, Transcript of seryl-tRNA synthetase, humanhuman

TSL 2

Gene SARS, Length 851 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SARS-204ENST00000471705 NISCHQ9Y2I1 1504 aa18.54■□□□□ 0.56
SARS-204ENST00000471705 CCDC180Q9P1Z9 1646 aa16.7■□□□□ 0.26
SARS-204ENST00000471705 ABCC9O60706 1549 aa16.7■□□□□ 0.26
SARS-204ENST00000471705 RB1CC1Q8TDY2 1594 aa15.92■□□□□ 0.14
SARS-204ENST00000471705 NACADO15069 1562 aa15.8■□□□□ 0.12
SARS-204ENST00000471705 DNAJC5BQ9UF47 199 aa15.75■□□□□ 0.11
SARS-204ENST00000471705 DCAF8L2P0C7V8 631 aa15.6■□□□□ 0.09
SARS-204ENST00000471705 MYO15BQ96JP2 1530 aa15.59■□□□□ 0.09
SARS-204ENST00000471705 UNC13AQ9UPW8 1703 aa15.56■□□□□ 0.08
SARS-204ENST00000471705 PABPN1Q86U42 306 aaKnown RBP eCLIP15.53■□□□□ 0.08
SARS-204ENST00000471705 BICRAQ9NZM4 1560 aa15.45■□□□□ 0.06
SARS-204ENST00000471705 DCAF1Q9Y4B6 1507 aa15.36■□□□□ 0.05
SARS-204ENST00000471705 ZCCHC6Q5VYS8 1495 aaKnown RBP15.34■□□□□ 0.05
SARS-204ENST00000471705 SHROOM4Q9ULL8 1493 aa15.29■□□□□ 0.04
SARS-204ENST00000471705 SCRIBQ14160 1630 aa15.14■□□□□ 0.01
SARS-204ENST00000471705 CC2D2AQ9P2K1 1620 aa15.12■□□□□ 0.01
SARS-204ENST00000471705 CECR2Q9BXF3 1484 aa15.08■□□□□ 0
SARS-204ENST00000471705 EIF4G1Q04637 1599 aaKnown RBP15.07■□□□□ 0
SARS-204ENST00000471705 NCAPD3P42695 1498 aa14.59□□□□□ -0.07
SARS-204ENST00000471705 DNAJC5Q9H3Z4 198 aa14.56□□□□□ -0.08
SARS-204ENST00000471705 ATAD2BQ9ULI0 1458 aa14.5□□□□□ -0.09
SARS-204ENST00000471705 CUX2O14529 1486 aa14.48□□□□□ -0.09
SARS-204ENST00000471705 SMARCA4P51532 1647 aa14.48□□□□□ -0.09
SARS-204ENST00000471705 SMARCA2P51531 1590 aa14.47□□□□□ -0.09
SARS-204ENST00000471705 HMGXB3Q12766 1538 aa14.46□□□□□ -0.09
SARS-204ENST00000471705 ERCC6Q03468 1493 aa14.43□□□□□ -0.1
SARS-204ENST00000471705 BAZ1AQ9NRL2 1556 aaPredicted RBP14.4□□□□□ -0.1
SARS-204ENST00000471705 PEG3Q9GZU2 1588 aa14.37□□□□□ -0.11
SARS-204ENST00000471705 BAZ1BQ9UIG0 1483 aaKnown RBP14.35□□□□□ -0.11
SARS-204ENST00000471705 NESP48681 1621 aa14.33□□□□□ -0.12
SARS-204ENST00000471705 MROH2BQ7Z745 1585 aa14.26□□□□□ -0.13
SARS-204ENST00000471705 LAMC3Q9Y6N6 1575 aa14.26□□□□□ -0.13
SARS-204ENST00000471705 THOC2Q8NI27 1593 aaKnown RBP14.22□□□□□ -0.13
SARS-204ENST00000471705 PDS5BQ9NTI5 1447 aa14.18□□□□□ -0.14
SARS-204ENST00000471705 KIF21AQ7Z4S6 1674 aa14.16□□□□□ -0.14
SARS-204ENST00000471705 CADPSQ9ULU8 1353 aa14.12□□□□□ -0.15
SARS-204ENST00000471705 WIZO95785 1651 aa14.09□□□□□ -0.15
SARS-204ENST00000471705 MRC2Q9UBG0 1479 aa14.05□□□□□ -0.16
SARS-204ENST00000471705 WDR62O43379 1518 aa14.03□□□□□ -0.16
SARS-204ENST00000471705 CEP164Q9UPV0 1460 aa13.97□□□□□ -0.17
SARS-204ENST00000471705 CFTRP13569 1480 aa13.96□□□□□ -0.17
SARS-204ENST00000471705 RSF1Q96T23 1441 aaPredicted RBP13.95□□□□□ -0.18
SARS-204ENST00000471705 FANCD2Q9BXW9 1451 aa13.94□□□□□ -0.18
SARS-204ENST00000471705 TOP2AP11388 1531 aaKnown RBP13.92□□□□□ -0.18
SARS-204ENST00000471705 URB2Q14146 1524 aaKnown RBP13.84□□□□□ -0.19
SARS-204ENST00000471705 PRDM2Q13029 1718 aa13.83□□□□□ -0.2
SARS-204ENST00000471705 TRIM41Q8WV44 630 aa13.81□□□□□ -0.2
SARS-204ENST00000471705 OSCARQ8IYS5 282 aa13.8□□□□□ -0.2
SARS-204ENST00000471705 CCDC88BA6NC98 1476 aa13.75□□□□□ -0.21
SARS-204ENST00000471705 IFT140Q96RY7 1462 aa13.71□□□□□ -0.21
SARS-204ENST00000471705 ABCC8Q09428 1581 aa13.68□□□□□ -0.22
SARS-204ENST00000471705 TOPBP1Q92547 1522 aa13.68□□□□□ -0.22
SARS-204ENST00000471705 ZNF608Q9ULD9 1512 aaPredicted RBP13.66□□□□□ -0.22
SARS-204ENST00000471705 DNMBPQ6XZF7 1577 aa13.62□□□□□ -0.23
SARS-204ENST00000471705 RIMBP3CA6NJZ7 1639 aa13.61□□□□□ -0.23
SARS-204ENST00000471705 RIMBP3BA6NNM3 1639 aa13.61□□□□□ -0.23
SARS-204ENST00000471705 RIMBP3Q9UFD9 1639 aa13.61□□□□□ -0.23
SARS-204ENST00000471705 EIF4G3O43432 1585 aaKnown RBP13.59□□□□□ -0.23
SARS-204ENST00000471705 TARBP1Q13395 1621 aaKnown RBP13.58□□□□□ -0.24
SARS-204ENST00000471705 ARHGEF11O15085 1522 aa13.56□□□□□ -0.24
SARS-204ENST00000471705 AQRO60306 1485 aaKnown RBP eCLIP13.54□□□□□ -0.243e-7■■■■□ 23.8
SARS-204ENST00000471705 POLA1P09884 1462 aaPredicted RBP13.53□□□□□ -0.24
SARS-204ENST00000471705 CHD1O14646 1710 aa13.52□□□□□ -0.25
SARS-204ENST00000471705 WDR97A6NE52 1622 aa13.47□□□□□ -0.25
SARS-204ENST00000471705 SOGA1O94964 1423 aa13.47□□□□□ -0.25
SARS-204ENST00000471705 RAD54L2Q9Y4B4 1467 aa13.46□□□□□ -0.25
SARS-204ENST00000471705 CYB5RLQ6IPT4 315 aa13.44□□□□□ -0.26
SARS-204ENST00000471705 FBLN2P98095 1184 aa13.43□□□□□ -0.26
SARS-204ENST00000471705 TDRD9Q8NDG6 1382 aaKnown RBP13.43□□□□□ -0.26
SARS-204ENST00000471705 FGD5Q6ZNL6 1462 aa13.42□□□□□ -0.26
SARS-204ENST00000471705 ARAP1Q96P48 1450 aa13.42□□□□□ -0.26
SARS-204ENST00000471705 CUX1P39880 1505 aa13.41□□□□□ -0.26
SARS-204ENST00000471705 SNAPC4Q5SXM2 1469 aa13.39□□□□□ -0.27
SARS-204ENST00000471705 MAGI1Q96QZ7 1491 aaPredicted RBP13.39□□□□□ -0.27
SARS-204ENST00000471705 GRIN2BQ13224 1484 aa13.37□□□□□ -0.27
SARS-204ENST00000471705 CLASP1Q7Z460 1538 aa13.37□□□□□ -0.27
SARS-204ENST00000471705 CHMP7Q8WUX9 453 aaPredicted RBP13.35□□□□□ -0.27
SARS-204ENST00000471705 SYNJ1O43426 1573 aa13.35□□□□□ -0.27
SARS-204ENST00000471705 SYNJ2O15056 1496 aa13.34□□□□□ -0.27
SARS-204ENST00000471705 PBRM1Q86U86 1689 aa13.31□□□□□ -0.28
SARS-204ENST00000471705 GAPVD1Q14C86 1478 aa13.3□□□□□ -0.28
SARS-204ENST00000471705 TRHP20396 242 aaPredicted RBP13.3□□□□□ -0.28
SARS-204ENST00000471705 ABCA10Q8WWZ4 1543 aa13.29□□□□□ -0.28
SARS-204ENST00000471705 ABCA5Q8WWZ7 1642 aa13.28□□□□□ -0.28
SARS-204ENST00000471705 WRNQ14191 1432 aaPredicted RBP eCLIP13.22□□□□□ -0.29
SARS-204ENST00000471705 SUPT5HO00267 1087 aaKnown RBP13.21□□□□□ -0.29
SARS-204ENST00000471705 GRIN2AQ12879 1464 aa13.19□□□□□ -0.3
SARS-204ENST00000471705 TOP2BQ02880 1626 aa13.19□□□□□ -0.3
SARS-204ENST00000471705 BIVM-ERCC5R4GMW8 1640 aa13.19□□□□□ -0.3
SARS-204ENST00000471705 ADAMTS12P58397 1594 aa13.17□□□□□ -0.3
SARS-204ENST00000471705 NUP160Q12769 1436 aa13.16□□□□□ -0.3
SARS-204ENST00000471705 FHAD1B1AJZ9 1412 aa13.14□□□□□ -0.31
SARS-204ENST00000471705 CEP170Q5SW79 1584 aa13.14□□□□□ -0.31
SARS-204ENST00000471705 ERICH3Q5RHP9 1530 aa13.13□□□□□ -0.31
SARS-204ENST00000471705 SHROOM2Q13796 1616 aa13.13□□□□□ -0.31
SARS-204ENST00000471705 ERCC6L2Q5T890 1561 aa13.12□□□□□ -0.31
SARS-204ENST00000471705 JPH4Q96JJ6 628 aa13.02□□□□□ -0.33
SARS-204ENST00000471705 PRG4Q92954 1404 aaPredicted RBP13.02□□□□□ -0.33
SARS-204ENST00000471705 KIF13AQ9H1H9 1805 aa12.99□□□□□ -0.33
SARS-204ENST00000471705 RUSC2Q8N2Y8 1516 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms