RNA–Protein interactions for RNA: ENST00000471511.1

RPRD1B-204, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-204ENST00000471511 NISCHQ9Y2I1 1504 aa24.54■■□□□ 1.52
RPRD1B-204ENST00000471511 ABCC9O60706 1549 aa21.93■■□□□ 1.1
RPRD1B-204ENST00000471511 CCDC180Q9P1Z9 1646 aa21.84■■□□□ 1.09
RPRD1B-204ENST00000471511 RB1CC1Q8TDY2 1594 aa20.77■□□□□ 0.92
RPRD1B-204ENST00000471511 DCAF8L2P0C7V8 631 aa20.72■□□□□ 0.91
RPRD1B-204ENST00000471511 NACADO15069 1562 aa20.67■□□□□ 0.9
RPRD1B-204ENST00000471511 DNAJC5BQ9UF47 199 aa20.66■□□□□ 0.9
RPRD1B-204ENST00000471511 PABPN1Q86U42 306 aaKnown RBP eCLIP20.51■□□□□ 0.87
RPRD1B-204ENST00000471511 MYO15BQ96JP2 1530 aa20.41■□□□□ 0.86
RPRD1B-204ENST00000471511 UNC13AQ9UPW8 1703 aa20.36■□□□□ 0.85
RPRD1B-204ENST00000471511 ZCCHC6Q5VYS8 1495 aaKnown RBP20.35■□□□□ 0.85
RPRD1B-204ENST00000471511 BICRAQ9NZM4 1560 aa20.31■□□□□ 0.84
RPRD1B-204ENST00000471511 DCAF1Q9Y4B6 1507 aa20.2■□□□□ 0.82
RPRD1B-204ENST00000471511 SCRIBQ14160 1630 aa20.02■□□□□ 0.8
RPRD1B-204ENST00000471511 SHROOM4Q9ULL8 1493 aa19.84■□□□□ 0.77
RPRD1B-204ENST00000471511 CC2D2AQ9P2K1 1620 aa19.76■□□□□ 0.75
RPRD1B-204ENST00000471511 EIF4G1Q04637 1599 aaKnown RBP19.74■□□□□ 0.75
RPRD1B-204ENST00000471511 CECR2Q9BXF3 1484 aa19.7■□□□□ 0.74
RPRD1B-204ENST00000471511 NCAPD3P42695 1498 aa19.16■□□□□ 0.66
RPRD1B-204ENST00000471511 ATAD2BQ9ULI0 1458 aa19.14■□□□□ 0.65
RPRD1B-204ENST00000471511 SMARCA4P51532 1647 aa19.08■□□□□ 0.65
RPRD1B-204ENST00000471511 SMARCA2P51531 1590 aa18.97■□□□□ 0.63
RPRD1B-204ENST00000471511 MROH2BQ7Z745 1585 aa18.97■□□□□ 0.63
RPRD1B-204ENST00000471511 BAZ1AQ9NRL2 1556 aaPredicted RBP18.96■□□□□ 0.63
RPRD1B-204ENST00000471511 HMGXB3Q12766 1538 aa18.95■□□□□ 0.62
RPRD1B-204ENST00000471511 AEBP2Q6ZN18 517 aaPredicted RBP18.93■□□□□ 0.62
RPRD1B-204ENST00000471511 NESP48681 1621 aa18.91■□□□□ 0.62
RPRD1B-204ENST00000471511 BAZ1BQ9UIG0 1483 aaKnown RBP18.89■□□□□ 0.61
RPRD1B-204ENST00000471511 PEG3Q9GZU2 1588 aa18.89■□□□□ 0.61
RPRD1B-204ENST00000471511 ERCC6Q03468 1493 aa18.81■□□□□ 0.6
RPRD1B-204ENST00000471511 DNAJC5Q9H3Z4 198 aa18.76■□□□□ 0.59
RPRD1B-204ENST00000471511 CUX2O14529 1486 aa18.74■□□□□ 0.59
RPRD1B-204ENST00000471511 WIZO95785 1651 aa18.71■□□□□ 0.59
RPRD1B-204ENST00000471511 LAMC3Q9Y6N6 1575 aa18.62■□□□□ 0.57
RPRD1B-204ENST00000471511 THOC2Q8NI27 1593 aaKnown RBP18.6■□□□□ 0.57
RPRD1B-204ENST00000471511 RSF1Q96T23 1441 aaPredicted RBP18.6■□□□□ 0.57
RPRD1B-204ENST00000471511 CADPSQ9ULU8 1353 aa18.58■□□□□ 0.57
RPRD1B-204ENST00000471511 KIF21AQ7Z4S6 1674 aa18.56■□□□□ 0.56
RPRD1B-204ENST00000471511 PDS5BQ9NTI5 1447 aa18.53■□□□□ 0.56
RPRD1B-204ENST00000471511 TOP2AP11388 1531 aaKnown RBP18.42■□□□□ 0.54
RPRD1B-204ENST00000471511 MRC2Q9UBG0 1479 aa18.39■□□□□ 0.54
RPRD1B-204ENST00000471511 CFTRP13569 1480 aa18.39■□□□□ 0.53
RPRD1B-204ENST00000471511 WDR62O43379 1518 aa18.35■□□□□ 0.53
RPRD1B-204ENST00000471511 FANCD2Q9BXW9 1451 aa18.35■□□□□ 0.53
RPRD1B-204ENST00000471511 CEP164Q9UPV0 1460 aa18.32■□□□□ 0.52
RPRD1B-204ENST00000471511 CCDC88BA6NC98 1476 aa18.29■□□□□ 0.52
RPRD1B-204ENST00000471511 URB2Q14146 1524 aaKnown RBP18.25■□□□□ 0.51
RPRD1B-204ENST00000471511 PRDM2Q13029 1718 aa18.06■□□□□ 0.48
RPRD1B-204ENST00000471511 ZNF608Q9ULD9 1512 aaPredicted RBP18.04■□□□□ 0.48
RPRD1B-204ENST00000471511 TOPBP1Q92547 1522 aa18.03■□□□□ 0.48
RPRD1B-204ENST00000471511 OSCARQ8IYS5 282 aa17.97■□□□□ 0.47
RPRD1B-204ENST00000471511 TRIM41Q8WV44 630 aa17.97■□□□□ 0.47
RPRD1B-204ENST00000471511 IFT140Q96RY7 1462 aa17.96■□□□□ 0.47
RPRD1B-204ENST00000471511 DNMBPQ6XZF7 1577 aa17.92■□□□□ 0.46
RPRD1B-204ENST00000471511 CHIC1Q5VXU3 224 aa17.89■□□□□ 0.45
RPRD1B-204ENST00000471511 AQRO60306 1485 aaKnown RBP eCLIP17.88■□□□□ 0.45
RPRD1B-204ENST00000471511 ABCC8Q09428 1581 aa17.88■□□□□ 0.45
RPRD1B-204ENST00000471511 POLA1P09884 1462 aaPredicted RBP17.87■□□□□ 0.45
RPRD1B-204ENST00000471511 TARBP1Q13395 1621 aaKnown RBP17.87■□□□□ 0.45
RPRD1B-204ENST00000471511 SUPT5HO00267 1087 aaKnown RBP17.86■□□□□ 0.45
RPRD1B-204ENST00000471511 RAD54L2Q9Y4B4 1467 aa17.86■□□□□ 0.45
RPRD1B-204ENST00000471511 EIF4G3O43432 1585 aaKnown RBP17.83■□□□□ 0.45
RPRD1B-204ENST00000471511 CUX1P39880 1505 aa17.79■□□□□ 0.44
RPRD1B-204ENST00000471511 TDRD9Q8NDG6 1382 aaKnown RBP17.79■□□□□ 0.44
RPRD1B-204ENST00000471511 SOGA1O94964 1423 aa17.78■□□□□ 0.44
RPRD1B-204ENST00000471511 FGD5Q6ZNL6 1462 aa17.76■□□□□ 0.43
RPRD1B-204ENST00000471511 RIMBP3CA6NJZ7 1639 aa17.72■□□□□ 0.43
RPRD1B-204ENST00000471511 RIMBP3BA6NNM3 1639 aa17.72■□□□□ 0.43
RPRD1B-204ENST00000471511 RIMBP3Q9UFD9 1639 aa17.72■□□□□ 0.43
RPRD1B-204ENST00000471511 FBLN2P98095 1184 aa17.69■□□□□ 0.42
RPRD1B-204ENST00000471511 ARHGEF11O15085 1522 aa17.68■□□□□ 0.42
RPRD1B-204ENST00000471511 CHD1O14646 1710 aa17.67■□□□□ 0.42
RPRD1B-204ENST00000471511 SNAPC4Q5SXM2 1469 aa17.64■□□□□ 0.41
RPRD1B-204ENST00000471511 CYB5RLQ6IPT4 315 aa17.6■□□□□ 0.41
RPRD1B-204ENST00000471511 WDR97A6NE52 1622 aa17.58■□□□□ 0.4
RPRD1B-204ENST00000471511 GRIN2BQ13224 1484 aa17.56■□□□□ 0.4
RPRD1B-204ENST00000471511 ARAP1Q96P48 1450 aa17.56■□□□□ 0.4
RPRD1B-204ENST00000471511 CHMP7Q8WUX9 453 aaPredicted RBP17.55■□□□□ 0.4
RPRD1B-204ENST00000471511 ABCA10Q8WWZ4 1543 aa17.54■□□□□ 0.4
RPRD1B-204ENST00000471511 GAPVD1Q14C86 1478 aa17.54■□□□□ 0.4
RPRD1B-204ENST00000471511 CLASP1Q7Z460 1538 aa17.52■□□□□ 0.4
RPRD1B-204ENST00000471511 MAGI1Q96QZ7 1491 aaPredicted RBP17.52■□□□□ 0.4
RPRD1B-204ENST00000471511 SYNJ1O43426 1573 aa17.5■□□□□ 0.39
RPRD1B-204ENST00000471511 ABCA5Q8WWZ7 1642 aa17.5■□□□□ 0.39
RPRD1B-204ENST00000471511 SYNJ2O15056 1496 aa17.5■□□□□ 0.39
RPRD1B-204ENST00000471511 WRNQ14191 1432 aaPredicted RBP eCLIP17.47■□□□□ 0.39
RPRD1B-204ENST00000471511 PBRM1Q86U86 1689 aa17.46■□□□□ 0.39
RPRD1B-204ENST00000471511 TOP2BQ02880 1626 aa17.45■□□□□ 0.38
RPRD1B-204ENST00000471511 BIVM-ERCC5R4GMW8 1640 aa17.44■□□□□ 0.38
RPRD1B-204ENST00000471511 GRIN2AQ12879 1464 aa17.36■□□□□ 0.37
RPRD1B-204ENST00000471511 ERCC6L2Q5T890 1561 aa17.36■□□□□ 0.37
RPRD1B-204ENST00000471511 ADAMTS12P58397 1594 aa17.35■□□□□ 0.37
RPRD1B-204ENST00000471511 CEP170Q5SW79 1584 aa17.32■□□□□ 0.36
RPRD1B-204ENST00000471511 NUP160Q12769 1436 aa17.32■□□□□ 0.36
RPRD1B-204ENST00000471511 TRHP20396 242 aaPredicted RBP17.31■□□□□ 0.36
RPRD1B-204ENST00000471511 FHAD1B1AJZ9 1412 aa17.3■□□□□ 0.36
RPRD1B-204ENST00000471511 ERICH3Q5RHP9 1530 aa17.27■□□□□ 0.36
RPRD1B-204ENST00000471511 IGF1RP08069 1367 aa17.21■□□□□ 0.35
RPRD1B-204ENST00000471511 SHROOM2Q13796 1616 aa17.2■□□□□ 0.34
RPRD1B-204ENST00000471511 JPH4Q96JJ6 628 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms