RNA–Protein interactions for RNA: ENST00000471061.1

PDCD11-203, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 410 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-203ENST00000471061 NISCHQ9Y2I1 1504 aa30.6■■■□□ 2.49
PDCD11-203ENST00000471061 CCDC180Q9P1Z9 1646 aa27.24■■□□□ 1.95
PDCD11-203ENST00000471061 ABCC9O60706 1549 aa27.2■■□□□ 1.94
PDCD11-203ENST00000471061 DCAF8L2P0C7V8 631 aa25.87■■□□□ 1.73
PDCD11-203ENST00000471061 DNAJC5BQ9UF47 199 aa25.86■■□□□ 1.73
PDCD11-203ENST00000471061 RB1CC1Q8TDY2 1594 aa25.75■■□□□ 1.71
PDCD11-203ENST00000471061 NACADO15069 1562 aa25.65■■□□□ 1.7
PDCD11-203ENST00000471061 ZCCHC6Q5VYS8 1495 aaKnown RBP25.44■■□□□ 1.66
PDCD11-203ENST00000471061 MYO15BQ96JP2 1530 aa25.38■■□□□ 1.65
PDCD11-203ENST00000471061 PABPN1Q86U42 306 aaKnown RBP eCLIP25.32■■□□□ 1.64
PDCD11-203ENST00000471061 DCAF1Q9Y4B6 1507 aa25.26■■□□□ 1.63
PDCD11-203ENST00000471061 UNC13AQ9UPW8 1703 aa25.25■■□□□ 1.63
PDCD11-203ENST00000471061 BICRAQ9NZM4 1560 aa25.11■■□□□ 1.61
PDCD11-203ENST00000471061 SCRIBQ14160 1630 aa24.94■■□□□ 1.58
PDCD11-203ENST00000471061 SHROOM4Q9ULL8 1493 aa24.61■■□□□ 1.53
PDCD11-203ENST00000471061 CC2D2AQ9P2K1 1620 aa24.54■■□□□ 1.52
PDCD11-203ENST00000471061 CECR2Q9BXF3 1484 aa24.49■■□□□ 1.51
PDCD11-203ENST00000471061 EIF4G1Q04637 1599 aaKnown RBP24.42■■□□□ 1.5
PDCD11-203ENST00000471061 SMARCA4P51532 1647 aa23.78■■□□□ 1.4
PDCD11-203ENST00000471061 DNAJC5Q9H3Z4 198 aa23.77■■□□□ 1.4
PDCD11-203ENST00000471061 BAZ1AQ9NRL2 1556 aaPredicted RBP23.75■■□□□ 1.39
PDCD11-203ENST00000471061 SMARCA2P51531 1590 aa23.67■■□□□ 1.38
PDCD11-203ENST00000471061 ATAD2BQ9ULI0 1458 aa23.67■■□□□ 1.38
PDCD11-203ENST00000471061 NCAPD3P42695 1498 aa23.65■■□□□ 1.38
PDCD11-203ENST00000471061 MROH2BQ7Z745 1585 aa23.59■■□□□ 1.37
PDCD11-203ENST00000471061 BAZ1BQ9UIG0 1483 aaKnown RBP23.54■■□□□ 1.36
PDCD11-203ENST00000471061 HMGXB3Q12766 1538 aa23.53■■□□□ 1.36
PDCD11-203ENST00000471061 PEG3Q9GZU2 1588 aa23.48■■□□□ 1.35
PDCD11-203ENST00000471061 CUX2O14529 1486 aa23.44■■□□□ 1.34
PDCD11-203ENST00000471061 ERCC6Q03468 1493 aa23.4■■□□□ 1.34
PDCD11-203ENST00000471061 WIZO95785 1651 aa23.36■■□□□ 1.33
PDCD11-203ENST00000471061 NESP48681 1621 aa23.36■■□□□ 1.33
PDCD11-203ENST00000471061 RSF1Q96T23 1441 aaPredicted RBP23.28■■□□□ 1.32
PDCD11-203ENST00000471061 THOC2Q8NI27 1593 aaKnown RBP23.11■■□□□ 1.29
PDCD11-203ENST00000471061 TOP2AP11388 1531 aaKnown RBP23.08■■□□□ 1.29
PDCD11-203ENST00000471061 LAMC3Q9Y6N6 1575 aa23.08■■□□□ 1.29
PDCD11-203ENST00000471061 CADPSQ9ULU8 1353 aa23.01■■□□□ 1.27
PDCD11-203ENST00000471061 KIF21AQ7Z4S6 1674 aa23■■□□□ 1.27
PDCD11-203ENST00000471061 PDS5BQ9NTI5 1447 aa22.98■■□□□ 1.27
PDCD11-203ENST00000471061 CCDC88BA6NC98 1476 aa22.83■■□□□ 1.25
PDCD11-203ENST00000471061 SUPT5HO00267 1087 aaKnown RBP22.81■■□□□ 1.24
PDCD11-203ENST00000471061 CFTRP13569 1480 aa22.8■■□□□ 1.24
PDCD11-203ENST00000471061 FANCD2Q9BXW9 1451 aa22.76■■□□□ 1.23
PDCD11-203ENST00000471061 CEP164Q9UPV0 1460 aa22.76■■□□□ 1.23
PDCD11-203ENST00000471061 MRC2Q9UBG0 1479 aa22.73■■□□□ 1.23
PDCD11-203ENST00000471061 WDR62O43379 1518 aa22.7■■□□□ 1.22
PDCD11-203ENST00000471061 PRDM2Q13029 1718 aa22.66■■□□□ 1.22
PDCD11-203ENST00000471061 TRIM41Q8WV44 630 aa22.61■■□□□ 1.21
PDCD11-203ENST00000471061 URB2Q14146 1524 aaKnown RBP22.49■■□□□ 1.19
PDCD11-203ENST00000471061 ABCC8Q09428 1581 aa22.38■■□□□ 1.17
PDCD11-203ENST00000471061 TOPBP1Q92547 1522 aa22.36■■□□□ 1.17
PDCD11-203ENST00000471061 OSCARQ8IYS5 282 aa22.34■■□□□ 1.17
PDCD11-203ENST00000471061 DNMBPQ6XZF7 1577 aa22.33■■□□□ 1.16
PDCD11-203ENST00000471061 IFT140Q96RY7 1462 aa22.26■■□□□ 1.15
PDCD11-203ENST00000471061 ZNF608Q9ULD9 1512 aaPredicted RBP22.24■■□□□ 1.15
PDCD11-203ENST00000471061 POLA1P09884 1462 aaPredicted RBP22.15■■□□□ 1.14
PDCD11-203ENST00000471061 RIMBP3CA6NJZ7 1639 aa22.15■■□□□ 1.14
PDCD11-203ENST00000471061 RIMBP3BA6NNM3 1639 aa22.15■■□□□ 1.14
PDCD11-203ENST00000471061 RIMBP3Q9UFD9 1639 aa22.15■■□□□ 1.14
PDCD11-203ENST00000471061 CUX1P39880 1505 aa22.14■■□□□ 1.13
PDCD11-203ENST00000471061 SOGA1O94964 1423 aa22.12■■□□□ 1.13
PDCD11-203ENST00000471061 FGD5Q6ZNL6 1462 aa22.11■■□□□ 1.13
PDCD11-203ENST00000471061 RAD54L2Q9Y4B4 1467 aa22.09■■□□□ 1.13
PDCD11-203ENST00000471061 TARBP1Q13395 1621 aaKnown RBP22.09■■□□□ 1.13
PDCD11-203ENST00000471061 EIF4G3O43432 1585 aaKnown RBP22.07■■□□□ 1.12
PDCD11-203ENST00000471061 AQRO60306 1485 aaKnown RBP eCLIP22.05■■□□□ 1.125e-6■■□□□ 14.3
PDCD11-203ENST00000471061 ARHGEF11O15085 1522 aa22.04■■□□□ 1.12
PDCD11-203ENST00000471061 TDRD9Q8NDG6 1382 aaKnown RBP22.01■■□□□ 1.11
PDCD11-203ENST00000471061 WRNQ14191 1432 aaPredicted RBP eCLIP22.01■■□□□ 1.11
PDCD11-203ENST00000471061 FBLN2P98095 1184 aa21.96■■□□□ 1.11
PDCD11-203ENST00000471061 CHD1O14646 1710 aa21.94■■□□□ 1.1
PDCD11-203ENST00000471061 TOP2BQ02880 1626 aa21.93■■□□□ 1.1
PDCD11-203ENST00000471061 BIVM-ERCC5R4GMW8 1640 aa21.91■■□□□ 1.1
PDCD11-203ENST00000471061 SYNJ1O43426 1573 aa21.91■■□□□ 1.1
PDCD11-203ENST00000471061 WDR97A6NE52 1622 aa21.91■■□□□ 1.1
PDCD11-203ENST00000471061 CYB5RLQ6IPT4 315 aa21.89■■□□□ 1.09
PDCD11-203ENST00000471061 ABCA10Q8WWZ4 1543 aa21.85■■□□□ 1.09
PDCD11-203ENST00000471061 GRIN2BQ13224 1484 aa21.85■■□□□ 1.09
PDCD11-203ENST00000471061 GAPVD1Q14C86 1478 aa21.85■■□□□ 1.09
PDCD11-203ENST00000471061 ARAP1Q96P48 1450 aa21.84■■□□□ 1.09
PDCD11-203ENST00000471061 SNAPC4Q5SXM2 1469 aa21.83■■□□□ 1.09
PDCD11-203ENST00000471061 CHMP7Q8WUX9 453 aaPredicted RBP21.82■■□□□ 1.08
PDCD11-203ENST00000471061 PBRM1Q86U86 1689 aa21.8■■□□□ 1.08
PDCD11-203ENST00000471061 MAGI1Q96QZ7 1491 aaPredicted RBP21.78■■□□□ 1.08
PDCD11-203ENST00000471061 ABCA5Q8WWZ7 1642 aa21.76■■□□□ 1.07
PDCD11-203ENST00000471061 SYNJ2O15056 1496 aa21.71■■□□□ 1.07
PDCD11-203ENST00000471061 CLASP1Q7Z460 1538 aa21.69■■□□□ 1.06
PDCD11-203ENST00000471061 TRHP20396 242 aaPredicted RBP21.65■■□□□ 1.06
PDCD11-203ENST00000471061 ERICH3Q5RHP9 1530 aa21.6■■□□□ 1.05
PDCD11-203ENST00000471061 ADAMTS12P58397 1594 aa21.59■■□□□ 1.05
PDCD11-203ENST00000471061 FHAD1B1AJZ9 1412 aa21.58■■□□□ 1.05
PDCD11-203ENST00000471061 KIF27Q86VH2 1401 aa21.58■■□□□ 1.05
PDCD11-203ENST00000471061 GRIN2AQ12879 1464 aa21.55■■□□□ 1.04
PDCD11-203ENST00000471061 IGF1RP08069 1367 aa21.45■■□□□ 1.02
PDCD11-203ENST00000471061 CEP170Q5SW79 1584 aa21.43■■□□□ 1.02
PDCD11-203ENST00000471061 NUP160Q12769 1436 aa21.42■■□□□ 1.02
PDCD11-203ENST00000471061 ERCC6L2Q5T890 1561 aa21.42■■□□□ 1.02
PDCD11-203ENST00000471061 CUL7Q14999 1698 aa21.41■■□□□ 1.02
PDCD11-203ENST00000471061 CARMIL1Q5VZK9 1371 aa21.37■■□□□ 1.01
PDCD11-203ENST00000471061 RUSC2Q8N2Y8 1516 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms