RNA–Protein interactions for RNA: ENST00000471003.6

CNOT10-212, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

TSL 5

Gene CNOT10, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-212ENST00000471003 AEBP2Q6ZN18 517 aaPredicted RBP15.22■□□□□ 0.03
CNOT10-212ENST00000471003 CHIC1Q5VXU3 224 aa15.06■□□□□ 0
CNOT10-212ENST00000471003 PHF23Q9BUL5 403 aaPredicted RBP13.28□□□□□ -0.28
CNOT10-212ENST00000471003 SENP3Q9H4L4 574 aaPredicted RBP12.87□□□□□ -0.35
CNOT10-212ENST00000471003 PLPPR3Q6T4P5 718 aa12.33□□□□□ -0.44
CNOT10-212ENST00000471003 FOXD1Q16676 465 aa11.93□□□□□ -0.5
CNOT10-212ENST00000471003 ADRA2BP18089 450 aa11.67□□□□□ -0.54
CNOT10-212ENST00000471003 PPP6R1Q9UPN7 881 aa11.66□□□□□ -0.54
CNOT10-212ENST00000471003 NISCHQ9Y2I1 1504 aa11.58□□□□□ -0.56
CNOT10-212ENST00000471003 ABCC9O60706 1549 aa11.49□□□□□ -0.57
CNOT10-212ENST00000471003 PIAS4Q8N2W9 510 aaPredicted RBP11.32□□□□□ -0.6
CNOT10-212ENST00000471003 DNAJC5BQ9UF47 199 aa11.24□□□□□ -0.61
CNOT10-212ENST00000471003 PPP4R3CPQ6ZMV5 832 aa10.91□□□□□ -0.66
CNOT10-212ENST00000471003 MSH5O43196 834 aa10.9□□□□□ -0.66
CNOT10-212ENST00000471003 KCNA4P22459 653 aa10.9□□□□□ -0.66
CNOT10-212ENST00000471003 CCDC180Q9P1Z9 1646 aa10.88□□□□□ -0.67
CNOT10-212ENST00000471003 DNAJC5Q9H3Z4 198 aa10.86□□□□□ -0.67
CNOT10-212ENST00000471003 NCBP3Q53F19 620 aaKnown RBP10.67□□□□□ -0.7
CNOT10-212ENST00000471003 RB1CC1Q8TDY2 1594 aa10.65□□□□□ -0.7
CNOT10-212ENST00000471003 SCAF1Q9H7N4 1312 aaKnown RBP10.65□□□□□ -0.7
CNOT10-212ENST00000471003 UNC13AQ9UPW8 1703 aa10.61□□□□□ -0.71
CNOT10-212ENST00000471003 CNKSR2Q8WXI2 1034 aa10.54□□□□□ -0.72
CNOT10-212ENST00000471003 MAPK8IP2Q13387 824 aaPredicted RBP10.53□□□□□ -0.72
CNOT10-212ENST00000471003 NPM3O75607 178 aaKnown RBP10.52□□□□□ -0.73
CNOT10-212ENST00000471003 PABPN1Q86U42 306 aaKnown RBP eCLIP10.49□□□□□ -0.73
CNOT10-212ENST00000471003 SLC4A1APQ9BWU0 796 aaKnown RBP10.42□□□□□ -0.74
CNOT10-212ENST00000471003 POTEDQ86YR6 584 aa10.4□□□□□ -0.74
CNOT10-212ENST00000471003 EHMT2Q96KQ7 1210 aa10.4□□□□□ -0.74
CNOT10-212ENST00000471003 CECR2Q9BXF3 1484 aa10.39□□□□□ -0.75
CNOT10-212ENST00000471003 CC2D2AQ9P2K1 1620 aa10.39□□□□□ -0.75
CNOT10-212ENST00000471003 NACADO15069 1562 aa10.34□□□□□ -0.75
CNOT10-212ENST00000471003 BICRAQ9NZM4 1560 aa10.31□□□□□ -0.76
CNOT10-212ENST00000471003 DMRT2Q9Y5R5 561 aa10.3□□□□□ -0.76
CNOT10-212ENST00000471003 RNF216Q9NWF9 866 aaPredicted RBP10.27□□□□□ -0.77
CNOT10-212ENST00000471003 TRIM41Q8WV44 630 aa10.24□□□□□ -0.77
CNOT10-212ENST00000471003 HOXD11P31277 338 aaPredicted RBP10.17□□□□□ -0.78
CNOT10-212ENST00000471003 CUX2O14529 1486 aa10.17□□□□□ -0.78
CNOT10-212ENST00000471003 EIF4G1Q04637 1599 aaKnown RBP10.15□□□□□ -0.78
CNOT10-212ENST00000471003 CSRNP3Q8WYN3 585 aa10.15□□□□□ -0.78
CNOT10-212ENST00000471003 DCAF8L2P0C7V8 631 aa10.11□□□□□ -0.79
CNOT10-212ENST00000471003 SHROOM4Q9ULL8 1493 aa10.05□□□□□ -0.8
CNOT10-212ENST00000471003 ZBTB22O15209 634 aa10.02□□□□□ -0.81
CNOT10-212ENST00000471003 ERCC6Q03468 1493 aa10.02□□□□□ -0.81
CNOT10-212ENST00000471003 FOXD4L1Q9NU39 408 aa9.96□□□□□ -0.82
CNOT10-212ENST00000471003 DCAF8L1A6NGE4 600 aa9.91□□□□□ -0.82
CNOT10-212ENST00000471003 SCRIBQ14160 1630 aa9.89□□□□□ -0.83
CNOT10-212ENST00000471003 SLC4A2P04920 1241 aa9.88□□□□□ -0.83
CNOT10-212ENST00000471003 MYO15BQ96JP2 1530 aa9.85□□□□□ -0.83
CNOT10-212ENST00000471003 THOC2Q8NI27 1593 aaKnown RBP9.78□□□□□ -0.84
CNOT10-212ENST00000471003 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.74□□□□□ -0.858e-6■□□□□ 8.2
CNOT10-212ENST00000471003 BAZ1AQ9NRL2 1556 aaPredicted RBP9.71□□□□□ -0.85
CNOT10-212ENST00000471003 MYCNP04198 464 aaPredicted RBP9.7□□□□□ -0.86
CNOT10-212ENST00000471003 SMARCA2P51531 1590 aa9.7□□□□□ -0.86
CNOT10-212ENST00000471003 KIF21AQ7Z4S6 1674 aa9.68□□□□□ -0.86
CNOT10-212ENST00000471003 RIMBP3CA6NJZ7 1639 aa9.65□□□□□ -0.86
CNOT10-212ENST00000471003 RIMBP3BA6NNM3 1639 aa9.65□□□□□ -0.86
CNOT10-212ENST00000471003 NESP48681 1621 aa9.65□□□□□ -0.86
CNOT10-212ENST00000471003 RIMBP3Q9UFD9 1639 aa9.65□□□□□ -0.86
CNOT10-212ENST00000471003 U3KPZ7 1027 aaPredicted RBP9.58□□□□□ -0.88
CNOT10-212ENST00000471003 TRHP20396 242 aaPredicted RBP9.57□□□□□ -0.88
CNOT10-212ENST00000471003 ATXN8OSP0DMR3 200 aa9.56□□□□□ -0.88
CNOT10-212ENST00000471003 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.51□□□□□ -0.89
CNOT10-212ENST00000471003 HNRNPUL2Q1KMD3 747 aaKnown RBP9.51□□□□□ -0.89
CNOT10-212ENST00000471003 SAMD1Q6SPF0 538 aaPredicted RBP9.5□□□□□ -0.89
CNOT10-212ENST00000471003 ILDR1Q86SU0 546 aaPredicted RBP9.5□□□□□ -0.89
CNOT10-212ENST00000471003 LAMC3Q9Y6N6 1575 aa9.5□□□□□ -0.89
CNOT10-212ENST00000471003 OSCARQ8IYS5 282 aa9.49□□□□□ -0.89
CNOT10-212ENST00000471003 DCAF1Q9Y4B6 1507 aa9.48□□□□□ -0.89
CNOT10-212ENST00000471003 ZCCHC6Q5VYS8 1495 aaKnown RBP9.47□□□□□ -0.89
CNOT10-212ENST00000471003 ARHGEF11O15085 1522 aa9.46□□□□□ -0.89
CNOT10-212ENST00000471003 ATF5Q9Y2D1 282 aaPredicted RBP9.45□□□□□ -0.9
CNOT10-212ENST00000471003 NCAPD3P42695 1498 aa9.44□□□□□ -0.9
CNOT10-212ENST00000471003 HMGXB3Q12766 1538 aa9.43□□□□□ -0.9
CNOT10-212ENST00000471003 WDR62O43379 1518 aa9.41□□□□□ -0.9
CNOT10-212ENST00000471003 MRC2Q9UBG0 1479 aa9.4□□□□□ -0.91
CNOT10-212ENST00000471003 PDS5BQ9NTI5 1447 aa9.38□□□□□ -0.91
CNOT10-212ENST00000471003 APLP2Q06481 763 aa9.37□□□□□ -0.91
CNOT10-212ENST00000471003 CYB5RLQ6IPT4 315 aa9.36□□□□□ -0.91
CNOT10-212ENST00000471003 RNF39Q9H2S5 420 aa9.36□□□□□ -0.91
CNOT10-212ENST00000471003 ATAD2BQ9ULI0 1458 aa9.35□□□□□ -0.91
CNOT10-212ENST00000471003 CHD1O14646 1710 aa9.31□□□□□ -0.92
CNOT10-212ENST00000471003 BAZ1BQ9UIG0 1483 aaKnown RBP9.31□□□□□ -0.92
CNOT10-212ENST00000471003 ARAP1Q96P48 1450 aa9.3□□□□□ -0.92
CNOT10-212ENST00000471003 SMARCA4P51532 1647 aa9.3□□□□□ -0.92
CNOT10-212ENST00000471003 SPINK5Q9NQ38 1064 aaPredicted RBP9.27□□□□□ -0.93
CNOT10-212ENST00000471003 ZNF219Q9P2Y4 722 aaPredicted RBP9.27□□□□□ -0.93
CNOT10-212ENST00000471003 C1QBPQ07021 282 aaKnown RBP9.26□□□□□ -0.93
CNOT10-212ENST00000471003 CEP164Q9UPV0 1460 aa9.24□□□□□ -0.93
CNOT10-212ENST00000471003 CAPN15O75808 1086 aa9.23□□□□□ -0.93
CNOT10-212ENST00000471003 FKBP8Q14318 412 aa9.18□□□□□ -0.94
CNOT10-212ENST00000471003 EIF4G3O43432 1585 aaKnown RBP9.14□□□□□ -0.95
CNOT10-212ENST00000471003 POLA2Q14181 598 aa9.13□□□□□ -0.95
CNOT10-212ENST00000471003 CADPSQ9ULU8 1353 aa9.12□□□□□ -0.95
CNOT10-212ENST00000471003 FANCD2Q9BXW9 1451 aa9.12□□□□□ -0.95
CNOT10-212ENST00000471003 RSF1Q96T23 1441 aaPredicted RBP9.12□□□□□ -0.95
CNOT10-212ENST00000471003 KIF13AQ9H1H9 1805 aa9.12□□□□□ -0.95
CNOT10-212ENST00000471003 PEG3Q9GZU2 1588 aa9.12□□□□□ -0.95
CNOT10-212ENST00000471003 ERCC6L2Q5T890 1561 aa9.11□□□□□ -0.95
CNOT10-212ENST00000471003 PRDM2Q13029 1718 aa9.11□□□□□ -0.95
CNOT10-212ENST00000471003 URB2Q14146 1524 aaKnown RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms