RNA–Protein interactions for RNA: ENST00000470742.5

ITSN1-224, Transcript of intersectin 1, humanhuman

TSL 4

Gene ITSN1, Length 474 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-224ENST00000470742 NISCHQ9Y2I1 1504 aa49.52■■■■■ 5.52
ITSN1-224ENST00000470742 CCDC180Q9P1Z9 1646 aa44.13■■■■■ 4.66
ITSN1-224ENST00000470742 ABCC9O60706 1549 aa43.3■■■■■ 4.52
ITSN1-224ENST00000470742 RB1CC1Q8TDY2 1594 aa41.59■■■■■ 4.25
ITSN1-224ENST00000470742 NACADO15069 1562 aa41.5■■■■■ 4.23
ITSN1-224ENST00000470742 DCAF8L2P0C7V8 631 aa41.48■■■■■ 4.23
ITSN1-224ENST00000470742 ZCCHC6Q5VYS8 1495 aaKnown RBP41.21■■■■■ 4.19
ITSN1-224ENST00000470742 MYO15BQ96JP2 1530 aa41.17■■■■■ 4.18
ITSN1-224ENST00000470742 DCAF1Q9Y4B6 1507 aa40.95■■■■■ 4.15
ITSN1-224ENST00000470742 UNC13AQ9UPW8 1703 aa40.76■■■■■ 4.11
ITSN1-224ENST00000470742 PABPN1Q86U42 306 aaKnown RBP eCLIP40.43■■■■■ 4.06
ITSN1-224ENST00000470742 BICRAQ9NZM4 1560 aa40.33■■■■■ 4.05
ITSN1-224ENST00000470742 SCRIBQ14160 1630 aa40.26■■■■■ 4.04
ITSN1-224ENST00000470742 DNAJC5BQ9UF47 199 aa39.85■■■■□ 3.97
ITSN1-224ENST00000470742 SHROOM4Q9ULL8 1493 aa39.85■■■■□ 3.97
ITSN1-224ENST00000470742 EIF4G1Q04637 1599 aaKnown RBP39.28■■■■□ 3.88
ITSN1-224ENST00000470742 CC2D2AQ9P2K1 1620 aa39.18■■■■□ 3.86
ITSN1-224ENST00000470742 CECR2Q9BXF3 1484 aa38.92■■■■□ 3.82
ITSN1-224ENST00000470742 SMARCA4P51532 1647 aa38.49■■■■□ 3.75
ITSN1-224ENST00000470742 BAZ1AQ9NRL2 1556 aaPredicted RBP38.4■■■■□ 3.74
ITSN1-224ENST00000470742 ATAD2BQ9ULI0 1458 aa38.28■■■■□ 3.72
ITSN1-224ENST00000470742 NCAPD3P42695 1498 aa38.27■■■■□ 3.72
ITSN1-224ENST00000470742 SMARCA2P51531 1590 aa38.24■■■■□ 3.71
ITSN1-224ENST00000470742 MROH2BQ7Z745 1585 aa38.17■■■■□ 3.7
ITSN1-224ENST00000470742 HMGXB3Q12766 1538 aa38.08■■■■□ 3.69
ITSN1-224ENST00000470742 PEG3Q9GZU2 1588 aa38.08■■■■□ 3.69
ITSN1-224ENST00000470742 BAZ1BQ9UIG0 1483 aaKnown RBP37.97■■■■□ 3.67
ITSN1-224ENST00000470742 WIZO95785 1651 aa37.8■■■■□ 3.64
ITSN1-224ENST00000470742 RSF1Q96T23 1441 aaPredicted RBP37.66■■■■□ 3.62
ITSN1-224ENST00000470742 NESP48681 1621 aa37.43■■■■□ 3.58
ITSN1-224ENST00000470742 TOP2AP11388 1531 aaKnown RBP37.35■■■■□ 3.57
ITSN1-224ENST00000470742 ERCC6Q03468 1493 aa37.34■■■■□ 3.57
ITSN1-224ENST00000470742 LAMC3Q9Y6N6 1575 aa37.31■■■■□ 3.56
ITSN1-224ENST00000470742 CADPSQ9ULU8 1353 aa37.15■■■■□ 3.54
ITSN1-224ENST00000470742 PDS5BQ9NTI5 1447 aa37.05■■■■□ 3.52
ITSN1-224ENST00000470742 KIF21AQ7Z4S6 1674 aa37.05■■■■□ 3.52
ITSN1-224ENST00000470742 CUX2O14529 1486 aa36.97■■■■□ 3.51
ITSN1-224ENST00000470742 CCDC88BA6NC98 1476 aa36.9■■■■□ 3.5
ITSN1-224ENST00000470742 THOC2Q8NI27 1593 aaKnown RBP36.9■■■■□ 3.5
ITSN1-224ENST00000470742 CFTRP13569 1480 aa36.89■■■■□ 3.5
ITSN1-224ENST00000470742 PRDM2Q13029 1718 aa36.74■■■■□ 3.47
ITSN1-224ENST00000470742 FANCD2Q9BXW9 1451 aa36.74■■■■□ 3.47
ITSN1-224ENST00000470742 CEP164Q9UPV0 1460 aa36.71■■■■□ 3.47
ITSN1-224ENST00000470742 MRC2Q9UBG0 1479 aa36.69■■■■□ 3.46
ITSN1-224ENST00000470742 SUPT5HO00267 1087 aaKnown RBP36.65■■■■□ 3.46
ITSN1-224ENST00000470742 WDR62O43379 1518 aa36.57■■■■□ 3.44
ITSN1-224ENST00000470742 URB2Q14146 1524 aaKnown RBP36.38■■■■□ 3.41
ITSN1-224ENST00000470742 TOPBP1Q92547 1522 aa36.14■■■■□ 3.38
ITSN1-224ENST00000470742 ABCC8Q09428 1581 aa36.13■■■■□ 3.37
ITSN1-224ENST00000470742 DNMBPQ6XZF7 1577 aa36.1■■■■□ 3.37
ITSN1-224ENST00000470742 DNAJC5Q9H3Z4 198 aa36.01■■■■□ 3.36
ITSN1-224ENST00000470742 IFT140Q96RY7 1462 aa35.95■■■■□ 3.35
ITSN1-224ENST00000470742 CUX1P39880 1505 aa35.82■■■■□ 3.32
ITSN1-224ENST00000470742 POLA1P09884 1462 aaPredicted RBP35.81■■■■□ 3.32
ITSN1-224ENST00000470742 ZNF608Q9ULD9 1512 aaPredicted RBP35.8■■■■□ 3.32
ITSN1-224ENST00000470742 TARBP1Q13395 1621 aaKnown RBP35.77■■■■□ 3.32
ITSN1-224ENST00000470742 FGD5Q6ZNL6 1462 aa35.72■■■■□ 3.31
ITSN1-224ENST00000470742 RAD54L2Q9Y4B4 1467 aa35.68■■■■□ 3.3
ITSN1-224ENST00000470742 EIF4G3O43432 1585 aaKnown RBP35.68■■■■□ 3.3
ITSN1-224ENST00000470742 SOGA1O94964 1423 aa35.67■■■■□ 3.3
ITSN1-224ENST00000470742 AQRO60306 1485 aaKnown RBP eCLIP35.58■■■■□ 3.29
ITSN1-224ENST00000470742 WRNQ14191 1432 aaPredicted RBP eCLIP35.53■■■■□ 3.28
ITSN1-224ENST00000470742 BIVM-ERCC5R4GMW8 1640 aa35.5■■■■□ 3.27
ITSN1-224ENST00000470742 TOP2BQ02880 1626 aa35.49■■■■□ 3.27
ITSN1-224ENST00000470742 TDRD9Q8NDG6 1382 aaKnown RBP35.49■■■■□ 3.27
ITSN1-224ENST00000470742 SYNJ1O43426 1573 aa35.47■■■■□ 3.27
ITSN1-224ENST00000470742 WDR97A6NE52 1622 aa35.47■■■■□ 3.27
ITSN1-224ENST00000470742 OSCARQ8IYS5 282 aa35.43■■■■□ 3.26
ITSN1-224ENST00000470742 ABCA10Q8WWZ4 1543 aa35.36■■■■□ 3.25
ITSN1-224ENST00000470742 CHD1O14646 1710 aa35.32■■■■□ 3.25
ITSN1-224ENST00000470742 PBRM1Q86U86 1689 aa35.27■■■■□ 3.24
ITSN1-224ENST00000470742 GRIN2BQ13224 1484 aa35.27■■■■□ 3.24
ITSN1-224ENST00000470742 GAPVD1Q14C86 1478 aa35.26■■■■□ 3.23
ITSN1-224ENST00000470742 ABCA5Q8WWZ7 1642 aa35.25■■■■□ 3.23
ITSN1-224ENST00000470742 SNAPC4Q5SXM2 1469 aa35.25■■■■□ 3.23
ITSN1-224ENST00000470742 FBLN2P98095 1184 aa35.21■■■■□ 3.23
ITSN1-224ENST00000470742 MAGI1Q96QZ7 1491 aaPredicted RBP35.19■■■■□ 3.22
ITSN1-224ENST00000470742 CHMP7Q8WUX9 453 aaPredicted RBP35.07■■■■□ 3.2
ITSN1-224ENST00000470742 SYNJ2O15056 1496 aa35.06■■■■□ 3.2
ITSN1-224ENST00000470742 ERICH3Q5RHP9 1530 aa34.93■■■■□ 3.18
ITSN1-224ENST00000470742 ADAMTS12P58397 1594 aa34.92■■■■□ 3.18
ITSN1-224ENST00000470742 RIMBP3CA6NJZ7 1639 aa34.92■■■■□ 3.18
ITSN1-224ENST00000470742 RIMBP3BA6NNM3 1639 aa34.92■■■■□ 3.18
ITSN1-224ENST00000470742 RIMBP3Q9UFD9 1639 aa34.92■■■■□ 3.18
ITSN1-224ENST00000470742 ARHGEF11O15085 1522 aa34.86■■■■□ 3.17
ITSN1-224ENST00000470742 CLASP1Q7Z460 1538 aa34.85■■■■□ 3.17
ITSN1-224ENST00000470742 FHAD1B1AJZ9 1412 aa34.84■■■■□ 3.17
ITSN1-224ENST00000470742 GRIN2AQ12879 1464 aa34.82■■■■□ 3.16
ITSN1-224ENST00000470742 KIF27Q86VH2 1401 aa34.81■■■■□ 3.16
ITSN1-224ENST00000470742 TRIM41Q8WV44 630 aa34.8■■■■□ 3.16
ITSN1-224ENST00000470742 CEP170Q5SW79 1584 aa34.67■■■■□ 3.14
ITSN1-224ENST00000470742 IGF1RP08069 1367 aa34.66■■■■□ 3.14
ITSN1-224ENST00000470742 NUP160Q12769 1436 aa34.65■■■■□ 3.14
ITSN1-224ENST00000470742 CUL7Q14999 1698 aa34.63■■■■□ 3.13
ITSN1-224ENST00000470742 ARAP1Q96P48 1450 aa34.56■■■■□ 3.12
ITSN1-224ENST00000470742 CYB5RLQ6IPT4 315 aa34.55■■■■□ 3.12
ITSN1-224ENST00000470742 CARMIL1Q5VZK9 1371 aa34.47■■■■□ 3.11
ITSN1-224ENST00000470742 RUSC2Q8N2Y8 1516 aa34.45■■■■□ 3.11
ITSN1-224ENST00000470742 SHROOM2Q13796 1616 aa34.45■■■■□ 3.11
ITSN1-224ENST00000470742 ERCC6L2Q5T890 1561 aa34.37■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms