RNA–Protein interactions for RNA: ENST00000470643.5

FLOT1-208, Transcript of flotillin 1, humanhuman

TSL 3

Gene FLOT1, Length 852 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FLOT1-208ENST00000470643 NISCHQ9Y2I1 1504 aa53.31■■■■■ 6.12
FLOT1-208ENST00000470643 CCDC180Q9P1Z9 1646 aa47.75■■■■■ 5.23
FLOT1-208ENST00000470643 ABCC9O60706 1549 aa47.67■■■■■ 5.22
FLOT1-208ENST00000470643 RB1CC1Q8TDY2 1594 aa45.45■■■■■ 4.87
FLOT1-208ENST00000470643 NACADO15069 1562 aa45.17■■■■■ 4.82
FLOT1-208ENST00000470643 DCAF8L2P0C7V8 631 aa45.1■■■■■ 4.81
FLOT1-208ENST00000470643 MYO15BQ96JP2 1530 aa44.59■■■■■ 4.73
FLOT1-208ENST00000470643 DNAJC5BQ9UF47 199 aa44.54■■■■■ 4.72
FLOT1-208ENST00000470643 PABPN1Q86U42 306 aaKnown RBP eCLIP44.44■■■■■ 4.7
FLOT1-208ENST00000470643 UNC13AQ9UPW8 1703 aa44.26■■■■■ 4.68
FLOT1-208ENST00000470643 ZCCHC6Q5VYS8 1495 aaKnown RBP44.2■■■■■ 4.67
FLOT1-208ENST00000470643 DCAF1Q9Y4B6 1507 aa44.05■■■■■ 4.64
FLOT1-208ENST00000470643 BICRAQ9NZM4 1560 aa44.01■■■■■ 4.64
FLOT1-208ENST00000470643 SHROOM4Q9ULL8 1493 aa43.57■■■■■ 4.57
FLOT1-208ENST00000470643 SCRIBQ14160 1630 aa43.53■■■■■ 4.56
FLOT1-208ENST00000470643 CC2D2AQ9P2K1 1620 aa43.04■■■■■ 4.48
FLOT1-208ENST00000470643 EIF4G1Q04637 1599 aaKnown RBP42.99■■■■■ 4.47
FLOT1-208ENST00000470643 CECR2Q9BXF3 1484 aa42.95■■■■■ 4.47
FLOT1-208ENST00000470643 NCAPD3P42695 1498 aa41.7■■■■■ 4.27
FLOT1-208ENST00000470643 ATAD2BQ9ULI0 1458 aa41.58■■■■■ 4.25
FLOT1-208ENST00000470643 SMARCA4P51532 1647 aa41.54■■■■■ 4.24
FLOT1-208ENST00000470643 SMARCA2P51531 1590 aa41.5■■■■■ 4.23
FLOT1-208ENST00000470643 BAZ1AQ9NRL2 1556 aaPredicted RBP41.41■■■■■ 4.22
FLOT1-208ENST00000470643 HMGXB3Q12766 1538 aa41.39■■■■■ 4.22
FLOT1-208ENST00000470643 ERCC6Q03468 1493 aa41.23■■■■■ 4.19
FLOT1-208ENST00000470643 BAZ1BQ9UIG0 1483 aaKnown RBP41.22■■■■■ 4.19
FLOT1-208ENST00000470643 PEG3Q9GZU2 1588 aa41.13■■■■■ 4.18
FLOT1-208ENST00000470643 CUX2O14529 1486 aa41.07■■■■■ 4.16
FLOT1-208ENST00000470643 MROH2BQ7Z745 1585 aa41.04■■■■■ 4.16
FLOT1-208ENST00000470643 NESP48681 1621 aa40.94■■■■■ 4.14
FLOT1-208ENST00000470643 DNAJC5Q9H3Z4 198 aa40.9■■■■■ 4.14
FLOT1-208ENST00000470643 LAMC3Q9Y6N6 1575 aa40.74■■■■■ 4.11
FLOT1-208ENST00000470643 PDS5BQ9NTI5 1447 aa40.58■■■■■ 4.09
FLOT1-208ENST00000470643 WIZO95785 1651 aa40.54■■■■■ 4.08
FLOT1-208ENST00000470643 THOC2Q8NI27 1593 aaKnown RBP40.48■■■■■ 4.07
FLOT1-208ENST00000470643 CADPSQ9ULU8 1353 aa40.48■■■■■ 4.07
FLOT1-208ENST00000470643 KIF21AQ7Z4S6 1674 aa40.39■■■■■ 4.06
FLOT1-208ENST00000470643 RSF1Q96T23 1441 aaPredicted RBP40.29■■■■■ 4.04
FLOT1-208ENST00000470643 MRC2Q9UBG0 1479 aa40.15■■■■■ 4.02
FLOT1-208ENST00000470643 TOP2AP11388 1531 aaKnown RBP40.09■■■■■ 4.01
FLOT1-208ENST00000470643 CEP164Q9UPV0 1460 aa40.04■■■■■ 4
FLOT1-208ENST00000470643 WDR62O43379 1518 aa40.01■■■■□ 3.99
FLOT1-208ENST00000470643 CFTRP13569 1480 aa40■■■■□ 3.99
FLOT1-208ENST00000470643 FANCD2Q9BXW9 1451 aa40■■■■□ 3.99
FLOT1-208ENST00000470643 CCDC88BA6NC98 1476 aa39.64■■■■□ 3.94
FLOT1-208ENST00000470643 URB2Q14146 1524 aaKnown RBP39.6■■■■□ 3.93
FLOT1-208ENST00000470643 PRDM2Q13029 1718 aa39.52■■■■□ 3.92
FLOT1-208ENST00000470643 OSCARQ8IYS5 282 aa39.3■■■■□ 3.88
FLOT1-208ENST00000470643 IFT140Q96RY7 1462 aa39.24■■■■□ 3.87
FLOT1-208ENST00000470643 ABCC8Q09428 1581 aa39.24■■■■□ 3.87
FLOT1-208ENST00000470643 TRIM41Q8WV44 630 aa39.22■■■■□ 3.87
FLOT1-208ENST00000470643 TOPBP1Q92547 1522 aa39.22■■■■□ 3.87
FLOT1-208ENST00000470643 DNMBPQ6XZF7 1577 aa39.09■■■■□ 3.85
FLOT1-208ENST00000470643 ZNF608Q9ULD9 1512 aaPredicted RBP39.09■■■■□ 3.85
FLOT1-208ENST00000470643 EIF4G3O43432 1585 aaKnown RBP38.87■■■■□ 3.81
FLOT1-208ENST00000470643 POLA1P09884 1462 aaPredicted RBP38.83■■■■□ 3.81
FLOT1-208ENST00000470643 TARBP1Q13395 1621 aaKnown RBP38.81■■■■□ 3.8
FLOT1-208ENST00000470643 AQRO60306 1485 aaKnown RBP eCLIP38.79■■■■□ 3.83e-8■■■■■ 33
FLOT1-208ENST00000470643 SUPT5HO00267 1087 aaKnown RBP38.72■■■■□ 3.79
FLOT1-208ENST00000470643 SOGA1O94964 1423 aa38.72■■■■□ 3.79
FLOT1-208ENST00000470643 RAD54L2Q9Y4B4 1467 aa38.68■■■■□ 3.78
FLOT1-208ENST00000470643 FBLN2P98095 1184 aa38.63■■■■□ 3.77
FLOT1-208ENST00000470643 RIMBP3CA6NJZ7 1639 aa38.62■■■■□ 3.77
FLOT1-208ENST00000470643 RIMBP3BA6NNM3 1639 aa38.62■■■■□ 3.77
FLOT1-208ENST00000470643 RIMBP3Q9UFD9 1639 aa38.62■■■■□ 3.77
FLOT1-208ENST00000470643 FGD5Q6ZNL6 1462 aa38.61■■■■□ 3.77
FLOT1-208ENST00000470643 TDRD9Q8NDG6 1382 aaKnown RBP38.6■■■■□ 3.77
FLOT1-208ENST00000470643 CUX1P39880 1505 aa38.56■■■■□ 3.76
FLOT1-208ENST00000470643 ARHGEF11O15085 1522 aa38.55■■■■□ 3.76
FLOT1-208ENST00000470643 CHD1O14646 1710 aa38.53■■■■□ 3.76
FLOT1-208ENST00000470643 WDR97A6NE52 1622 aa38.5■■■■□ 3.75
FLOT1-208ENST00000470643 SNAPC4Q5SXM2 1469 aa38.4■■■■□ 3.74
FLOT1-208ENST00000470643 CHMP7Q8WUX9 453 aaPredicted RBP38.37■■■■□ 3.73
FLOT1-208ENST00000470643 GRIN2BQ13224 1484 aa38.36■■■■□ 3.73
FLOT1-208ENST00000470643 CYB5RLQ6IPT4 315 aa38.34■■■■□ 3.73
FLOT1-208ENST00000470643 MAGI1Q96QZ7 1491 aaPredicted RBP38.34■■■■□ 3.73
FLOT1-208ENST00000470643 GAPVD1Q14C86 1478 aa38.23■■■■□ 3.71
FLOT1-208ENST00000470643 SYNJ2O15056 1496 aa38.21■■■■□ 3.71
FLOT1-208ENST00000470643 SYNJ1O43426 1573 aa38.19■■■■□ 3.7
FLOT1-208ENST00000470643 ABCA10Q8WWZ4 1543 aa38.19■■■■□ 3.7
FLOT1-208ENST00000470643 ARAP1Q96P48 1450 aa38.15■■■■□ 3.7
FLOT1-208ENST00000470643 WRNQ14191 1432 aaPredicted RBP eCLIP38.13■■■■□ 3.7
FLOT1-208ENST00000470643 CLASP1Q7Z460 1538 aa38.12■■■■□ 3.69
FLOT1-208ENST00000470643 PBRM1Q86U86 1689 aa38.11■■■■□ 3.69
FLOT1-208ENST00000470643 ABCA5Q8WWZ7 1642 aa38.06■■■■□ 3.68
FLOT1-208ENST00000470643 TOP2BQ02880 1626 aa38■■■■□ 3.67
FLOT1-208ENST00000470643 BIVM-ERCC5R4GMW8 1640 aa37.98■■■■□ 3.67
FLOT1-208ENST00000470643 TRHP20396 242 aaPredicted RBP37.93■■■■□ 3.66
FLOT1-208ENST00000470643 GRIN2AQ12879 1464 aa37.84■■■■□ 3.65
FLOT1-208ENST00000470643 ADAMTS12P58397 1594 aa37.78■■■■□ 3.64
FLOT1-208ENST00000470643 FHAD1B1AJZ9 1412 aa37.78■■■■□ 3.64
FLOT1-208ENST00000470643 ERICH3Q5RHP9 1530 aa37.73■■■■□ 3.63
FLOT1-208ENST00000470643 NUP160Q12769 1436 aa37.69■■■■□ 3.62
FLOT1-208ENST00000470643 CEP170Q5SW79 1584 aa37.63■■■■□ 3.62
FLOT1-208ENST00000470643 ERCC6L2Q5T890 1561 aa37.49■■■■□ 3.59
FLOT1-208ENST00000470643 SHROOM2Q13796 1616 aa37.45■■■■□ 3.59
FLOT1-208ENST00000470643 JPH4Q96JJ6 628 aa37.39■■■■□ 3.58
FLOT1-208ENST00000470643 KIF27Q86VH2 1401 aa37.36■■■■□ 3.57
FLOT1-208ENST00000470643 PRG4Q92954 1404 aaPredicted RBP37.36■■■■□ 3.57
FLOT1-208ENST00000470643 IGF1RP08069 1367 aa37.29■■■■□ 3.56
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms