RNA–Protein interactions for RNA: ENST00000470482.5

HDLBP-232, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-232ENST00000470482 NISCHQ9Y2I1 1504 aa29.39■■■□□ 2.3
HDLBP-232ENST00000470482 CCDC180Q9P1Z9 1646 aa26.19■■□□□ 1.78
HDLBP-232ENST00000470482 ABCC9O60706 1549 aa25.94■■□□□ 1.74
HDLBP-232ENST00000470482 RB1CC1Q8TDY2 1594 aa24.8■■□□□ 1.56
HDLBP-232ENST00000470482 NACADO15069 1562 aa24.75■■□□□ 1.55
HDLBP-232ENST00000470482 MYO15BQ96JP2 1530 aa24.6■■□□□ 1.53
HDLBP-232ENST00000470482 DCAF8L2P0C7V8 631 aa24.5■■□□□ 1.51
HDLBP-232ENST00000470482 ZCCHC6Q5VYS8 1495 aaKnown RBP24.39■■□□□ 1.5
HDLBP-232ENST00000470482 DNAJC5BQ9UF47 199 aa24.35■■□□□ 1.49
HDLBP-232ENST00000470482 DCAF1Q9Y4B6 1507 aa24.35■■□□□ 1.49
HDLBP-232ENST00000470482 UNC13AQ9UPW8 1703 aa24.26■■□□□ 1.47
HDLBP-232ENST00000470482 PABPN1Q86U42 306 aaKnown RBP eCLIP24.23■■□□□ 1.47
HDLBP-232ENST00000470482 BICRAQ9NZM4 1560 aa24.21■■□□□ 1.47
HDLBP-232ENST00000470482 SHROOM4Q9ULL8 1493 aa23.87■■□□□ 1.41
HDLBP-232ENST00000470482 SCRIBQ14160 1630 aa23.81■■□□□ 1.4
HDLBP-232ENST00000470482 EIF4G1Q04637 1599 aaKnown RBP23.5■■□□□ 1.35
HDLBP-232ENST00000470482 CC2D2AQ9P2K1 1620 aa23.48■■□□□ 1.35
HDLBP-232ENST00000470482 CECR2Q9BXF3 1484 aa23.37■■□□□ 1.33
HDLBP-232ENST00000470482 NCAPD3P42695 1498 aa22.93■■□□□ 1.26
HDLBP-232ENST00000470482 ATAD2BQ9ULI0 1458 aa22.85■■□□□ 1.25
HDLBP-232ENST00000470482 SMARCA4P51532 1647 aa22.82■■□□□ 1.24
HDLBP-232ENST00000470482 SMARCA2P51531 1590 aa22.72■■□□□ 1.23
HDLBP-232ENST00000470482 BAZ1AQ9NRL2 1556 aaPredicted RBP22.72■■□□□ 1.23
HDLBP-232ENST00000470482 HMGXB3Q12766 1538 aa22.7■■□□□ 1.22
HDLBP-232ENST00000470482 PEG3Q9GZU2 1588 aa22.69■■□□□ 1.22
HDLBP-232ENST00000470482 MROH2BQ7Z745 1585 aa22.64■■□□□ 1.22
HDLBP-232ENST00000470482 BAZ1BQ9UIG0 1483 aaKnown RBP22.53■■□□□ 1.2
HDLBP-232ENST00000470482 NESP48681 1621 aa22.42■■□□□ 1.18
HDLBP-232ENST00000470482 CUX2O14529 1486 aa22.32■■□□□ 1.16
HDLBP-232ENST00000470482 WIZO95785 1651 aa22.31■■□□□ 1.16
HDLBP-232ENST00000470482 ERCC6Q03468 1493 aa22.29■■□□□ 1.16
HDLBP-232ENST00000470482 RSF1Q96T23 1441 aaPredicted RBP22.29■■□□□ 1.16
HDLBP-232ENST00000470482 LAMC3Q9Y6N6 1575 aa22.26■■□□□ 1.15
HDLBP-232ENST00000470482 CADPSQ9ULU8 1353 aa22.2■■□□□ 1.14
HDLBP-232ENST00000470482 DNAJC5Q9H3Z4 198 aa22.14■■□□□ 1.13
HDLBP-232ENST00000470482 PDS5BQ9NTI5 1447 aa22.13■■□□□ 1.13
HDLBP-232ENST00000470482 THOC2Q8NI27 1593 aaKnown RBP22.12■■□□□ 1.13
HDLBP-232ENST00000470482 TOP2AP11388 1531 aaKnown RBP22.06■■□□□ 1.12
HDLBP-232ENST00000470482 KIF21AQ7Z4S6 1674 aa22.04■■□□□ 1.12
HDLBP-232ENST00000470482 CFTRP13569 1480 aa22.02■■□□□ 1.12
HDLBP-232ENST00000470482 MRC2Q9UBG0 1479 aa21.91■■□□□ 1.1
HDLBP-232ENST00000470482 WDR62O43379 1518 aa21.9■■□□□ 1.1
HDLBP-232ENST00000470482 FANCD2Q9BXW9 1451 aa21.88■■□□□ 1.09
HDLBP-232ENST00000470482 CCDC88BA6NC98 1476 aa21.86■■□□□ 1.09
HDLBP-232ENST00000470482 CEP164Q9UPV0 1460 aa21.83■■□□□ 1.09
HDLBP-232ENST00000470482 URB2Q14146 1524 aaKnown RBP21.74■■□□□ 1.07
HDLBP-232ENST00000470482 PRDM2Q13029 1718 aa21.64■■□□□ 1.06
HDLBP-232ENST00000470482 TOPBP1Q92547 1522 aa21.51■■□□□ 1.03
HDLBP-232ENST00000470482 ABCC8Q09428 1581 aa21.47■■□□□ 1.03
HDLBP-232ENST00000470482 IFT140Q96RY7 1462 aa21.45■■□□□ 1.02
HDLBP-232ENST00000470482 DNMBPQ6XZF7 1577 aa21.42■■□□□ 1.02
HDLBP-232ENST00000470482 ZNF608Q9ULD9 1512 aaPredicted RBP21.42■■□□□ 1.02
HDLBP-232ENST00000470482 OSCARQ8IYS5 282 aa21.34■■□□□ 1.01
HDLBP-232ENST00000470482 TARBP1Q13395 1621 aaKnown RBP21.33■■□□□ 1.01
HDLBP-232ENST00000470482 POLA1P09884 1462 aaPredicted RBP21.32■■□□□ 1
HDLBP-232ENST00000470482 SUPT5HO00267 1087 aaKnown RBP21.29■■□□□ 1
HDLBP-232ENST00000470482 CUX1P39880 1505 aa21.24■□□□□ 0.99
HDLBP-232ENST00000470482 AQRO60306 1485 aaKnown RBP eCLIP21.24■□□□□ 0.995e-8■■■■□ 23.6
HDLBP-232ENST00000470482 RAD54L2Q9Y4B4 1467 aa21.23■□□□□ 0.99
HDLBP-232ENST00000470482 EIF4G3O43432 1585 aaKnown RBP21.23■□□□□ 0.99
HDLBP-232ENST00000470482 SOGA1O94964 1423 aa21.21■□□□□ 0.99
HDLBP-232ENST00000470482 FGD5Q6ZNL6 1462 aa21.18■□□□□ 0.98
HDLBP-232ENST00000470482 TDRD9Q8NDG6 1382 aaKnown RBP21.14■□□□□ 0.98
HDLBP-232ENST00000470482 WDR97A6NE52 1622 aa21.09■□□□□ 0.97
HDLBP-232ENST00000470482 TRIM41Q8WV44 630 aa21.03■□□□□ 0.96
HDLBP-232ENST00000470482 ABCA10Q8WWZ4 1543 aa21.01■□□□□ 0.95
HDLBP-232ENST00000470482 CHD1O14646 1710 aa21■□□□□ 0.95
HDLBP-232ENST00000470482 RIMBP3CA6NJZ7 1639 aa21■□□□□ 0.95
HDLBP-232ENST00000470482 RIMBP3BA6NNM3 1639 aa21■□□□□ 0.95
HDLBP-232ENST00000470482 RIMBP3Q9UFD9 1639 aa21■□□□□ 0.95
HDLBP-232ENST00000470482 GRIN2BQ13224 1484 aa20.99■□□□□ 0.95
HDLBP-232ENST00000470482 SNAPC4Q5SXM2 1469 aa20.98■□□□□ 0.95
HDLBP-232ENST00000470482 ARHGEF11O15085 1522 aa20.98■□□□□ 0.95
HDLBP-232ENST00000470482 MAGI1Q96QZ7 1491 aaPredicted RBP20.96■□□□□ 0.95
HDLBP-232ENST00000470482 GAPVD1Q14C86 1478 aa20.94■□□□□ 0.94
HDLBP-232ENST00000470482 TOP2BQ02880 1626 aa20.93■□□□□ 0.94
HDLBP-232ENST00000470482 WRNQ14191 1432 aaPredicted RBP eCLIP20.93■□□□□ 0.94
HDLBP-232ENST00000470482 BIVM-ERCC5R4GMW8 1640 aa20.93■□□□□ 0.94
HDLBP-232ENST00000470482 ABCA5Q8WWZ7 1642 aa20.92■□□□□ 0.94
HDLBP-232ENST00000470482 SYNJ1O43426 1573 aa20.91■□□□□ 0.94
HDLBP-232ENST00000470482 FBLN2P98095 1184 aa20.91■□□□□ 0.94
HDLBP-232ENST00000470482 SYNJ2O15056 1496 aa20.89■□□□□ 0.94
HDLBP-232ENST00000470482 CLASP1Q7Z460 1538 aa20.88■□□□□ 0.93
HDLBP-232ENST00000470482 CHMP7Q8WUX9 453 aaPredicted RBP20.86■□□□□ 0.93
HDLBP-232ENST00000470482 PBRM1Q86U86 1689 aa20.83■□□□□ 0.92
HDLBP-232ENST00000470482 ARAP1Q96P48 1450 aa20.81■□□□□ 0.92
HDLBP-232ENST00000470482 CYB5RLQ6IPT4 315 aa20.78■□□□□ 0.92
HDLBP-232ENST00000470482 GRIN2AQ12879 1464 aa20.72■□□□□ 0.91
HDLBP-232ENST00000470482 ERICH3Q5RHP9 1530 aa20.72■□□□□ 0.91
HDLBP-232ENST00000470482 ADAMTS12P58397 1594 aa20.72■□□□□ 0.91
HDLBP-232ENST00000470482 NUP160Q12769 1436 aa20.71■□□□□ 0.91
HDLBP-232ENST00000470482 FHAD1B1AJZ9 1412 aa20.7■□□□□ 0.9
HDLBP-232ENST00000470482 CEP170Q5SW79 1584 aa20.63■□□□□ 0.89
HDLBP-232ENST00000470482 IGF1RP08069 1367 aa20.6■□□□□ 0.89
HDLBP-232ENST00000470482 SHROOM2Q13796 1616 aa20.57■□□□□ 0.88
HDLBP-232ENST00000470482 ERCC6L2Q5T890 1561 aa20.57■□□□□ 0.88
HDLBP-232ENST00000470482 KIF27Q86VH2 1401 aa20.5■□□□□ 0.87
HDLBP-232ENST00000470482 JPH4Q96JJ6 628 aa20.47■□□□□ 0.87
HDLBP-232ENST00000470482 PRG4Q92954 1404 aaPredicted RBP20.42■□□□□ 0.86
HDLBP-232ENST00000470482 RUSC2Q8N2Y8 1516 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms