RNA–Protein interactions for RNA: ENST00000470471.1

PTK7-209, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 2

Gene PTK7, Length 854 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-209ENST00000470471 NISCHQ9Y2I1 1504 aa27.86■■■□□ 2.05
PTK7-209ENST00000470471 CHIC1Q5VXU3 224 aa27■■□□□ 1.91
PTK7-209ENST00000470471 AEBP2Q6ZN18 517 aaPredicted RBP26.94■■□□□ 1.9
PTK7-209ENST00000470471 ABCC9O60706 1549 aa24.98■■□□□ 1.59
PTK7-209ENST00000470471 CCDC180Q9P1Z9 1646 aa24.86■■□□□ 1.57
PTK7-209ENST00000470471 PHF23Q9BUL5 403 aaPredicted RBP23.77■■□□□ 1.4
PTK7-209ENST00000470471 DNAJC5BQ9UF47 199 aa23.65■■□□□ 1.38
PTK7-209ENST00000470471 RB1CC1Q8TDY2 1594 aa23.65■■□□□ 1.38
PTK7-209ENST00000470471 DCAF8L2P0C7V8 631 aa23.53■■□□□ 1.36
PTK7-209ENST00000470471 NACADO15069 1562 aa23.52■■□□□ 1.36
PTK7-209ENST00000470471 PABPN1Q86U42 306 aaKnown RBP eCLIP23.35■■□□□ 1.33
PTK7-209ENST00000470471 UNC13AQ9UPW8 1703 aa23.28■■□□□ 1.32
PTK7-209ENST00000470471 MYO15BQ96JP2 1530 aa23.2■■□□□ 1.3
PTK7-209ENST00000470471 BICRAQ9NZM4 1560 aa23.16■■□□□ 1.3
PTK7-209ENST00000470471 ZCCHC6Q5VYS8 1495 aaKnown RBP23.06■■□□□ 1.28
PTK7-209ENST00000470471 DCAF1Q9Y4B6 1507 aa22.94■■□□□ 1.26
PTK7-209ENST00000470471 SENP3Q9H4L4 574 aaPredicted RBP22.84■■□□□ 1.25
PTK7-209ENST00000470471 SCRIBQ14160 1630 aa22.75■■□□□ 1.23
PTK7-209ENST00000470471 SHROOM4Q9ULL8 1493 aa22.57■■□□□ 1.2
PTK7-209ENST00000470471 CC2D2AQ9P2K1 1620 aa22.54■■□□□ 1.2
PTK7-209ENST00000470471 EIF4G1Q04637 1599 aaKnown RBP22.48■■□□□ 1.19
PTK7-209ENST00000470471 CECR2Q9BXF3 1484 aa22.45■■□□□ 1.18
PTK7-209ENST00000470471 PLPPR3Q6T4P5 718 aa22.27■■□□□ 1.16
PTK7-209ENST00000470471 NCAPD3P42695 1498 aa21.8■■□□□ 1.08
PTK7-209ENST00000470471 ATAD2BQ9ULI0 1458 aa21.76■■□□□ 1.07
PTK7-209ENST00000470471 SMARCA4P51532 1647 aa21.69■■□□□ 1.06
PTK7-209ENST00000470471 SMARCA2P51531 1590 aa21.57■■□□□ 1.04
PTK7-209ENST00000470471 HMGXB3Q12766 1538 aa21.55■■□□□ 1.04
PTK7-209ENST00000470471 NESP48681 1621 aa21.54■■□□□ 1.04
PTK7-209ENST00000470471 MROH2BQ7Z745 1585 aa21.53■■□□□ 1.04
PTK7-209ENST00000470471 DNAJC5Q9H3Z4 198 aa21.53■■□□□ 1.04
PTK7-209ENST00000470471 BAZ1AQ9NRL2 1556 aaPredicted RBP21.53■■□□□ 1.04
PTK7-209ENST00000470471 PEG3Q9GZU2 1588 aa21.48■■□□□ 1.03
PTK7-209ENST00000470471 BAZ1BQ9UIG0 1483 aaKnown RBP21.45■■□□□ 1.03
PTK7-209ENST00000470471 ERCC6Q03468 1493 aa21.42■■□□□ 1.02
PTK7-209ENST00000470471 CUX2O14529 1486 aa21.39■■□□□ 1.02
PTK7-209ENST00000470471 WIZO95785 1651 aa21.25■□□□□ 0.99
PTK7-209ENST00000470471 THOC2Q8NI27 1593 aaKnown RBP21.21■□□□□ 0.99
PTK7-209ENST00000470471 LAMC3Q9Y6N6 1575 aa21.21■□□□□ 0.99
PTK7-209ENST00000470471 KIF21AQ7Z4S6 1674 aa21.17■□□□□ 0.98
PTK7-209ENST00000470471 CADPSQ9ULU8 1353 aa21.13■□□□□ 0.97
PTK7-209ENST00000470471 RSF1Q96T23 1441 aaPredicted RBP21.09■□□□□ 0.97
PTK7-209ENST00000470471 PDS5BQ9NTI5 1447 aa21.08■□□□□ 0.97
PTK7-209ENST00000470471 FOXD1Q16676 465 aa21.07■□□□□ 0.96
PTK7-209ENST00000470471 MRC2Q9UBG0 1479 aa20.93■□□□□ 0.94
PTK7-209ENST00000470471 CFTRP13569 1480 aa20.9■□□□□ 0.94
PTK7-209ENST00000470471 WDR62O43379 1518 aa20.89■□□□□ 0.94
PTK7-209ENST00000470471 TOP2AP11388 1531 aaKnown RBP20.88■□□□□ 0.93
PTK7-209ENST00000470471 FANCD2Q9BXW9 1451 aa20.86■□□□□ 0.93
PTK7-209ENST00000470471 ADRA2BP18089 450 aa20.85■□□□□ 0.93
PTK7-209ENST00000470471 CEP164Q9UPV0 1460 aa20.82■□□□□ 0.92
PTK7-209ENST00000470471 PPP6R1Q9UPN7 881 aa20.78■□□□□ 0.92
PTK7-209ENST00000470471 URB2Q14146 1524 aaKnown RBP20.77■□□□□ 0.92
PTK7-209ENST00000470471 CCDC88BA6NC98 1476 aa20.76■□□□□ 0.91
PTK7-209ENST00000470471 PRDM2Q13029 1718 aa20.58■□□□□ 0.89
PTK7-209ENST00000470471 TRIM41Q8WV44 630 aa20.54■□□□□ 0.88
PTK7-209ENST00000470471 ZNF608Q9ULD9 1512 aaPredicted RBP20.53■□□□□ 0.88
PTK7-209ENST00000470471 OSCARQ8IYS5 282 aa20.51■□□□□ 0.87
PTK7-209ENST00000470471 TOPBP1Q92547 1522 aa20.5■□□□□ 0.87
PTK7-209ENST00000470471 IFT140Q96RY7 1462 aa20.42■□□□□ 0.86
PTK7-209ENST00000470471 DNMBPQ6XZF7 1577 aa20.37■□□□□ 0.85
PTK7-209ENST00000470471 TARBP1Q13395 1621 aaKnown RBP20.35■□□□□ 0.85
PTK7-209ENST00000470471 AQRO60306 1485 aaKnown RBP eCLIP20.34■□□□□ 0.857e-6■□□□□ 9.8
PTK7-209ENST00000470471 ABCC8Q09428 1581 aa20.33■□□□□ 0.84
PTK7-209ENST00000470471 POLA1P09884 1462 aaPredicted RBP20.3■□□□□ 0.84
PTK7-209ENST00000470471 RAD54L2Q9Y4B4 1467 aa20.3■□□□□ 0.84
PTK7-209ENST00000470471 EIF4G3O43432 1585 aaKnown RBP20.29■□□□□ 0.84
PTK7-209ENST00000470471 RIMBP3CA6NJZ7 1639 aa20.24■□□□□ 0.83
PTK7-209ENST00000470471 RIMBP3BA6NNM3 1639 aa20.24■□□□□ 0.83
PTK7-209ENST00000470471 RIMBP3Q9UFD9 1639 aa20.24■□□□□ 0.83
PTK7-209ENST00000470471 TDRD9Q8NDG6 1382 aaKnown RBP20.21■□□□□ 0.83
PTK7-209ENST00000470471 CUX1P39880 1505 aa20.21■□□□□ 0.83
PTK7-209ENST00000470471 SOGA1O94964 1423 aa20.2■□□□□ 0.82
PTK7-209ENST00000470471 CHD1O14646 1710 aa20.17■□□□□ 0.82
PTK7-209ENST00000470471 SUPT5HO00267 1087 aaKnown RBP20.17■□□□□ 0.82
PTK7-209ENST00000470471 ARHGEF11O15085 1522 aa20.17■□□□□ 0.82
PTK7-209ENST00000470471 FGD5Q6ZNL6 1462 aa20.16■□□□□ 0.82
PTK7-209ENST00000470471 FBLN2P98095 1184 aa20.12■□□□□ 0.81
PTK7-209ENST00000470471 PIAS4Q8N2W9 510 aaPredicted RBP20.11■□□□□ 0.81
PTK7-209ENST00000470471 CYB5RLQ6IPT4 315 aa20.08■□□□□ 0.81
PTK7-209ENST00000470471 SNAPC4Q5SXM2 1469 aa20.05■□□□□ 0.8
PTK7-209ENST00000470471 ARAP1Q96P48 1450 aa20.02■□□□□ 0.8
PTK7-209ENST00000470471 WDR97A6NE52 1622 aa20■□□□□ 0.79
PTK7-209ENST00000470471 KCNA4P22459 653 aa19.97■□□□□ 0.79
PTK7-209ENST00000470471 CHMP7Q8WUX9 453 aaPredicted RBP19.96■□□□□ 0.79
PTK7-209ENST00000470471 GRIN2BQ13224 1484 aa19.96■□□□□ 0.79
PTK7-209ENST00000470471 CLASP1Q7Z460 1538 aa19.96■□□□□ 0.79
PTK7-209ENST00000470471 GAPVD1Q14C86 1478 aa19.93■□□□□ 0.78
PTK7-209ENST00000470471 MAGI1Q96QZ7 1491 aaPredicted RBP19.93■□□□□ 0.78
PTK7-209ENST00000470471 ABCA10Q8WWZ4 1543 aa19.92■□□□□ 0.78
PTK7-209ENST00000470471 SYNJ2O15056 1496 aa19.89■□□□□ 0.77
PTK7-209ENST00000470471 PBRM1Q86U86 1689 aa19.88■□□□□ 0.77
PTK7-209ENST00000470471 ABCA5Q8WWZ7 1642 aa19.88■□□□□ 0.77
PTK7-209ENST00000470471 SYNJ1O43426 1573 aa19.85■□□□□ 0.77
PTK7-209ENST00000470471 TOP2BQ02880 1626 aa19.8■□□□□ 0.76
PTK7-209ENST00000470471 BIVM-ERCC5R4GMW8 1640 aa19.8■□□□□ 0.76
PTK7-209ENST00000470471 WRNQ14191 1432 aaPredicted RBP eCLIP19.8■□□□□ 0.76
PTK7-209ENST00000470471 ERCC6L2Q5T890 1561 aa19.76■□□□□ 0.75
PTK7-209ENST00000470471 TRHP20396 242 aaPredicted RBP19.75■□□□□ 0.75
PTK7-209ENST00000470471 GRIN2AQ12879 1464 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms