RNA–Protein interactions for RNA: ENST00000469501.1

PRRC2A-207, Transcript of proline rich coiled-coil 2A, humanhuman

TSL 5

Gene PRRC2A, Length 347 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRRC2A-207ENST00000469501 NISCHQ9Y2I1 1504 aa22.21■■□□□ 1.15
PRRC2A-207ENST00000469501 CCDC180Q9P1Z9 1646 aa19.58■□□□□ 0.73
PRRC2A-207ENST00000469501 ABCC9O60706 1549 aa19.06■□□□□ 0.64
PRRC2A-207ENST00000469501 DCAF8L2P0C7V8 631 aa18.58■□□□□ 0.56
PRRC2A-207ENST00000469501 ZCCHC6Q5VYS8 1495 aaKnown RBP18.55■□□□□ 0.56
PRRC2A-207ENST00000469501 NACADO15069 1562 aa18.41■□□□□ 0.54
PRRC2A-207ENST00000469501 RB1CC1Q8TDY2 1594 aa18.38■□□□□ 0.53
PRRC2A-207ENST00000469501 DCAF1Q9Y4B6 1507 aa18.36■□□□□ 0.53
PRRC2A-207ENST00000469501 MYO15BQ96JP2 1530 aa18.34■□□□□ 0.53
PRRC2A-207ENST00000469501 SCRIBQ14160 1630 aa17.96■□□□□ 0.47
PRRC2A-207ENST00000469501 UNC13AQ9UPW8 1703 aa17.89■□□□□ 0.45
PRRC2A-207ENST00000469501 PABPN1Q86U42 306 aaKnown RBP eCLIP17.88■□□□□ 0.45
PRRC2A-207ENST00000469501 BICRAQ9NZM4 1560 aa17.79■□□□□ 0.44
PRRC2A-207ENST00000469501 SHROOM4Q9ULL8 1493 aa17.76■□□□□ 0.43
PRRC2A-207ENST00000469501 EIF4G1Q04637 1599 aaKnown RBP17.33■□□□□ 0.37
PRRC2A-207ENST00000469501 CECR2Q9BXF3 1484 aa17.31■□□□□ 0.36
PRRC2A-207ENST00000469501 DNAJC5BQ9UF47 199 aa17.29■□□□□ 0.36
PRRC2A-207ENST00000469501 CC2D2AQ9P2K1 1620 aa17.21■□□□□ 0.35
PRRC2A-207ENST00000469501 BAZ1AQ9NRL2 1556 aaPredicted RBP17.2■□□□□ 0.34
PRRC2A-207ENST00000469501 SMARCA4P51532 1647 aa17.17■□□□□ 0.34
PRRC2A-207ENST00000469501 MROH2BQ7Z745 1585 aa17.13■□□□□ 0.33
PRRC2A-207ENST00000469501 ATAD2BQ9ULI0 1458 aa17.05■□□□□ 0.32
PRRC2A-207ENST00000469501 RSF1Q96T23 1441 aaPredicted RBP17.02■□□□□ 0.31
PRRC2A-207ENST00000469501 SMARCA2P51531 1590 aa17.02■□□□□ 0.31
PRRC2A-207ENST00000469501 NCAPD3P42695 1498 aa16.99■□□□□ 0.31
PRRC2A-207ENST00000469501 PEG3Q9GZU2 1588 aa16.98■□□□□ 0.31
PRRC2A-207ENST00000469501 WIZO95785 1651 aa16.94■□□□□ 0.3
PRRC2A-207ENST00000469501 BAZ1BQ9UIG0 1483 aaKnown RBP16.93■□□□□ 0.3
PRRC2A-207ENST00000469501 HMGXB3Q12766 1538 aa16.91■□□□□ 0.3
PRRC2A-207ENST00000469501 SUPT5HO00267 1087 aaKnown RBP16.83■□□□□ 0.28
PRRC2A-207ENST00000469501 TOP2AP11388 1531 aaKnown RBP16.79■□□□□ 0.28
PRRC2A-207ENST00000469501 CCDC88BA6NC98 1476 aa16.61■□□□□ 0.25
PRRC2A-207ENST00000469501 CADPSQ9ULU8 1353 aa16.54■□□□□ 0.24
PRRC2A-207ENST00000469501 NESP48681 1621 aa16.54■□□□□ 0.24
PRRC2A-207ENST00000469501 LAMC3Q9Y6N6 1575 aa16.5■□□□□ 0.23
PRRC2A-207ENST00000469501 CFTRP13569 1480 aa16.47■□□□□ 0.23
PRRC2A-207ENST00000469501 PDS5BQ9NTI5 1447 aa16.43■□□□□ 0.22
PRRC2A-207ENST00000469501 ERCC6Q03468 1493 aa16.42■□□□□ 0.22
PRRC2A-207ENST00000469501 FANCD2Q9BXW9 1451 aa16.35■□□□□ 0.21
PRRC2A-207ENST00000469501 CEP164Q9UPV0 1460 aa16.3■□□□□ 0.2
PRRC2A-207ENST00000469501 KIF21AQ7Z4S6 1674 aa16.3■□□□□ 0.2
PRRC2A-207ENST00000469501 PRDM2Q13029 1718 aa16.27■□□□□ 0.19
PRRC2A-207ENST00000469501 MRC2Q9UBG0 1479 aa16.23■□□□□ 0.19
PRRC2A-207ENST00000469501 THOC2Q8NI27 1593 aaKnown RBP16.21■□□□□ 0.18
PRRC2A-207ENST00000469501 URB2Q14146 1524 aaKnown RBP16.15■□□□□ 0.18
PRRC2A-207ENST00000469501 WDR62O43379 1518 aa16.14■□□□□ 0.18
PRRC2A-207ENST00000469501 CUX2O14529 1486 aa16.13■□□□□ 0.17
PRRC2A-207ENST00000469501 ABCC8Q09428 1581 aa16.1■□□□□ 0.17
PRRC2A-207ENST00000469501 TOPBP1Q92547 1522 aa16.09■□□□□ 0.17
PRRC2A-207ENST00000469501 DNMBPQ6XZF7 1577 aa16.09■□□□□ 0.17
PRRC2A-207ENST00000469501 WRNQ14191 1432 aaPredicted RBP eCLIP16.06■□□□□ 0.16
PRRC2A-207ENST00000469501 CUX1P39880 1505 aa16.05■□□□□ 0.16
PRRC2A-207ENST00000469501 POLA1P09884 1462 aaPredicted RBP15.98■□□□□ 0.15
PRRC2A-207ENST00000469501 FGD5Q6ZNL6 1462 aa15.98■□□□□ 0.15
PRRC2A-207ENST00000469501 SYNJ1O43426 1573 aa15.97■□□□□ 0.15
PRRC2A-207ENST00000469501 IFT140Q96RY7 1462 aa15.96■□□□□ 0.14
PRRC2A-207ENST00000469501 TOP2BQ02880 1626 aa15.95■□□□□ 0.14
PRRC2A-207ENST00000469501 BIVM-ERCC5R4GMW8 1640 aa15.94■□□□□ 0.14
PRRC2A-207ENST00000469501 SOGA1O94964 1423 aa15.94■□□□□ 0.14
PRRC2A-207ENST00000469501 RAD54L2Q9Y4B4 1467 aa15.93■□□□□ 0.14
PRRC2A-207ENST00000469501 TRIM41Q8WV44 630 aa15.87■□□□□ 0.13
PRRC2A-207ENST00000469501 ZNF608Q9ULD9 1512 aaPredicted RBP15.87■□□□□ 0.13
PRRC2A-207ENST00000469501 TARBP1Q13395 1621 aaKnown RBP15.86■□□□□ 0.13
PRRC2A-207ENST00000469501 TDRD9Q8NDG6 1382 aaKnown RBP15.83■□□□□ 0.12
PRRC2A-207ENST00000469501 AQRO60306 1485 aaKnown RBP eCLIP15.82■□□□□ 0.125e-8■■■■□ 21.8
PRRC2A-207ENST00000469501 ABCA10Q8WWZ4 1543 aa15.82■□□□□ 0.12
PRRC2A-207ENST00000469501 CHIC1Q5VXU3 224 aa15.8■□□□□ 0.12
PRRC2A-207ENST00000469501 EIF4G3O43432 1585 aaKnown RBP15.78■□□□□ 0.12
PRRC2A-207ENST00000469501 WDR97A6NE52 1622 aa15.77■□□□□ 0.12
PRRC2A-207ENST00000469501 GAPVD1Q14C86 1478 aa15.75■□□□□ 0.11
PRRC2A-207ENST00000469501 ABCA5Q8WWZ7 1642 aa15.72■□□□□ 0.11
PRRC2A-207ENST00000469501 GRIN2BQ13224 1484 aa15.71■□□□□ 0.11
PRRC2A-207ENST00000469501 KIF27Q86VH2 1401 aa15.7■□□□□ 0.1
PRRC2A-207ENST00000469501 SNAPC4Q5SXM2 1469 aa15.68■□□□□ 0.1
PRRC2A-207ENST00000469501 PBRM1Q86U86 1689 aa15.64■□□□□ 0.09
PRRC2A-207ENST00000469501 RUSC2Q8N2Y8 1516 aa15.63■□□□□ 0.09
PRRC2A-207ENST00000469501 FBLN2P98095 1184 aa15.63■□□□□ 0.09
PRRC2A-207ENST00000469501 MAGI1Q96QZ7 1491 aaPredicted RBP15.63■□□□□ 0.09
PRRC2A-207ENST00000469501 ERICH3Q5RHP9 1530 aa15.63■□□□□ 0.09
PRRC2A-207ENST00000469501 IGF1RP08069 1367 aa15.62■□□□□ 0.09
PRRC2A-207ENST00000469501 CHMP7Q8WUX9 453 aaPredicted RBP15.6■□□□□ 0.09
PRRC2A-207ENST00000469501 FHAD1B1AJZ9 1412 aa15.58■□□□□ 0.08
PRRC2A-207ENST00000469501 SYNJ2O15056 1496 aa15.58■□□□□ 0.08
PRRC2A-207ENST00000469501 FAM9AQ8IZU1 332 aaPredicted RBP15.57■□□□□ 0.08
PRRC2A-207ENST00000469501 ADAMTS12P58397 1594 aa15.57■□□□□ 0.08
PRRC2A-207ENST00000469501 EEA1Q15075 1411 aa15.54■□□□□ 0.08
PRRC2A-207ENST00000469501 CARMIL1Q5VZK9 1371 aa15.54■□□□□ 0.08
PRRC2A-207ENST00000469501 OSCARQ8IYS5 282 aa15.54■□□□□ 0.08
PRRC2A-207ENST00000469501 CSRNP3Q8WYN3 585 aa15.52■□□□□ 0.08
PRRC2A-207ENST00000469501 CHD1O14646 1710 aa15.51■□□□□ 0.07
PRRC2A-207ENST00000469501 CUL7Q14999 1698 aa15.51■□□□□ 0.07
PRRC2A-207ENST00000469501 GRIN2AQ12879 1464 aa15.51■□□□□ 0.07
PRRC2A-207ENST00000469501 RAPGEF2Q9Y4G8 1499 aa15.46■□□□□ 0.07
PRRC2A-207ENST00000469501 PRXQ9BXM0 1461 aa15.44■□□□□ 0.06
PRRC2A-207ENST00000469501 NUP160Q12769 1436 aa15.43■□□□□ 0.06
PRRC2A-207ENST00000469501 CEP170Q5SW79 1584 aa15.41■□□□□ 0.06
PRRC2A-207ENST00000469501 DNAJC5Q9H3Z4 198 aa15.39■□□□□ 0.05
PRRC2A-207ENST00000469501 CLASP1Q7Z460 1538 aa15.38■□□□□ 0.05
PRRC2A-207ENST00000469501 EHMT2Q96KQ7 1210 aa15.37■□□□□ 0.05
PRRC2A-207ENST00000469501 KIAA0586Q9BVV6 1533 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms