RNA–Protein interactions for RNA: ENST00000469475.1

PSMD11-203, Transcript of proteasome 26S subunit, non-ATPase 11, humanhuman

TSL 2

Gene PSMD11, Length 473 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD11-203ENST00000469475 NISCHQ9Y2I1 1504 aa35.57■■■■□ 3.29
PSMD11-203ENST00000469475 CCDC180Q9P1Z9 1646 aa31.6■■■□□ 2.65
PSMD11-203ENST00000469475 ABCC9O60706 1549 aa31.3■■■□□ 2.6
PSMD11-203ENST00000469475 RB1CC1Q8TDY2 1594 aa29.86■■■□□ 2.37
PSMD11-203ENST00000469475 DCAF8L2P0C7V8 631 aa29.82■■■□□ 2.36
PSMD11-203ENST00000469475 NACADO15069 1562 aa29.79■■■□□ 2.36
PSMD11-203ENST00000469475 ZCCHC6Q5VYS8 1495 aaKnown RBP29.61■■■□□ 2.33
PSMD11-203ENST00000469475 MYO15BQ96JP2 1530 aa29.52■■■□□ 2.32
PSMD11-203ENST00000469475 DCAF1Q9Y4B6 1507 aa29.35■■■□□ 2.29
PSMD11-203ENST00000469475 UNC13AQ9UPW8 1703 aa29.28■■■□□ 2.28
PSMD11-203ENST00000469475 PABPN1Q86U42 306 aaKnown RBP eCLIP29.27■■■□□ 2.28
PSMD11-203ENST00000469475 BICRAQ9NZM4 1560 aa29.13■■■□□ 2.25
PSMD11-203ENST00000469475 DNAJC5BQ9UF47 199 aa29.07■■■□□ 2.24
PSMD11-203ENST00000469475 SCRIBQ14160 1630 aa28.95■■■□□ 2.23
PSMD11-203ENST00000469475 SHROOM4Q9ULL8 1493 aa28.58■■■□□ 2.17
PSMD11-203ENST00000469475 EIF4G1Q04637 1599 aaKnown RBP28.31■■■□□ 2.12
PSMD11-203ENST00000469475 CC2D2AQ9P2K1 1620 aa28.25■■■□□ 2.11
PSMD11-203ENST00000469475 CECR2Q9BXF3 1484 aa28.09■■■□□ 2.09
PSMD11-203ENST00000469475 SMARCA4P51532 1647 aa27.64■■■□□ 2.02
PSMD11-203ENST00000469475 ATAD2BQ9ULI0 1458 aa27.57■■■□□ 2
PSMD11-203ENST00000469475 NCAPD3P42695 1498 aa27.56■■■□□ 2
PSMD11-203ENST00000469475 BAZ1AQ9NRL2 1556 aaPredicted RBP27.52■■■□□ 2
PSMD11-203ENST00000469475 MROH2BQ7Z745 1585 aa27.49■■□□□ 1.99
PSMD11-203ENST00000469475 SMARCA2P51531 1590 aa27.42■■□□□ 1.98
PSMD11-203ENST00000469475 HMGXB3Q12766 1538 aa27.35■■□□□ 1.97
PSMD11-203ENST00000469475 PEG3Q9GZU2 1588 aa27.35■■□□□ 1.97
PSMD11-203ENST00000469475 BAZ1BQ9UIG0 1483 aaKnown RBP27.27■■□□□ 1.96
PSMD11-203ENST00000469475 WIZO95785 1651 aa27.15■■□□□ 1.94
PSMD11-203ENST00000469475 NESP48681 1621 aa27.08■■□□□ 1.93
PSMD11-203ENST00000469475 RSF1Q96T23 1441 aaPredicted RBP27.07■■□□□ 1.92
PSMD11-203ENST00000469475 ERCC6Q03468 1493 aa26.87■■□□□ 1.89
PSMD11-203ENST00000469475 TOP2AP11388 1531 aaKnown RBP26.8■■□□□ 1.88
PSMD11-203ENST00000469475 LAMC3Q9Y6N6 1575 aa26.79■■□□□ 1.88
PSMD11-203ENST00000469475 CADPSQ9ULU8 1353 aa26.73■■□□□ 1.87
PSMD11-203ENST00000469475 CUX2O14529 1486 aa26.66■■□□□ 1.86
PSMD11-203ENST00000469475 KIF21AQ7Z4S6 1674 aa26.65■■□□□ 1.86
PSMD11-203ENST00000469475 THOC2Q8NI27 1593 aaKnown RBP26.63■■□□□ 1.85
PSMD11-203ENST00000469475 PDS5BQ9NTI5 1447 aa26.61■■□□□ 1.85
PSMD11-203ENST00000469475 CFTRP13569 1480 aa26.55■■□□□ 1.84
PSMD11-203ENST00000469475 CCDC88BA6NC98 1476 aa26.54■■□□□ 1.84
PSMD11-203ENST00000469475 FANCD2Q9BXW9 1451 aa26.44■■□□□ 1.82
PSMD11-203ENST00000469475 MRC2Q9UBG0 1479 aa26.42■■□□□ 1.82
PSMD11-203ENST00000469475 CEP164Q9UPV0 1460 aa26.39■■□□□ 1.82
PSMD11-203ENST00000469475 WDR62O43379 1518 aa26.35■■□□□ 1.81
PSMD11-203ENST00000469475 URB2Q14146 1524 aaKnown RBP26.25■■□□□ 1.79
PSMD11-203ENST00000469475 SUPT5HO00267 1087 aaKnown RBP26.23■■□□□ 1.79
PSMD11-203ENST00000469475 PRDM2Q13029 1718 aa26.21■■□□□ 1.79
PSMD11-203ENST00000469475 DNAJC5Q9H3Z4 198 aa26.18■■□□□ 1.78
PSMD11-203ENST00000469475 TOPBP1Q92547 1522 aa26.01■■□□□ 1.75
PSMD11-203ENST00000469475 DNMBPQ6XZF7 1577 aa25.91■■□□□ 1.74
PSMD11-203ENST00000469475 ZNF608Q9ULD9 1512 aaPredicted RBP25.88■■□□□ 1.73
PSMD11-203ENST00000469475 ABCC8Q09428 1581 aa25.85■■□□□ 1.73
PSMD11-203ENST00000469475 IFT140Q96RY7 1462 aa25.85■■□□□ 1.73
PSMD11-203ENST00000469475 POLA1P09884 1462 aaPredicted RBP25.79■■□□□ 1.72
PSMD11-203ENST00000469475 CUX1P39880 1505 aa25.78■■□□□ 1.72
PSMD11-203ENST00000469475 TARBP1Q13395 1621 aaKnown RBP25.75■■□□□ 1.71
PSMD11-203ENST00000469475 RAD54L2Q9Y4B4 1467 aa25.74■■□□□ 1.71
PSMD11-203ENST00000469475 FGD5Q6ZNL6 1462 aa25.7■■□□□ 1.7
PSMD11-203ENST00000469475 AQRO60306 1485 aaKnown RBP eCLIP25.68■■□□□ 1.71e-7■■■□□ 16.7
PSMD11-203ENST00000469475 EIF4G3O43432 1585 aaKnown RBP25.68■■□□□ 1.7
PSMD11-203ENST00000469475 SOGA1O94964 1423 aa25.64■■□□□ 1.7
PSMD11-203ENST00000469475 TDRD9Q8NDG6 1382 aaKnown RBP25.59■■□□□ 1.69
PSMD11-203ENST00000469475 OSCARQ8IYS5 282 aa25.53■■□□□ 1.68
PSMD11-203ENST00000469475 SYNJ1O43426 1573 aa25.49■■□□□ 1.67
PSMD11-203ENST00000469475 WDR97A6NE52 1622 aa25.47■■□□□ 1.67
PSMD11-203ENST00000469475 WRNQ14191 1432 aaPredicted RBP eCLIP25.46■■□□□ 1.67
PSMD11-203ENST00000469475 TOP2BQ02880 1626 aa25.42■■□□□ 1.66
PSMD11-203ENST00000469475 BIVM-ERCC5R4GMW8 1640 aa25.42■■□□□ 1.66
PSMD11-203ENST00000469475 SNAPC4Q5SXM2 1469 aa25.4■■□□□ 1.66
PSMD11-203ENST00000469475 ABCA10Q8WWZ4 1543 aa25.39■■□□□ 1.66
PSMD11-203ENST00000469475 CHD1O14646 1710 aa25.38■■□□□ 1.65
PSMD11-203ENST00000469475 GRIN2BQ13224 1484 aa25.34■■□□□ 1.65
PSMD11-203ENST00000469475 FBLN2P98095 1184 aa25.34■■□□□ 1.65
PSMD11-203ENST00000469475 ABCA5Q8WWZ7 1642 aa25.34■■□□□ 1.65
PSMD11-203ENST00000469475 GAPVD1Q14C86 1478 aa25.33■■□□□ 1.65
PSMD11-203ENST00000469475 PBRM1Q86U86 1689 aa25.27■■□□□ 1.64
PSMD11-203ENST00000469475 MAGI1Q96QZ7 1491 aaPredicted RBP25.27■■□□□ 1.64
PSMD11-203ENST00000469475 TRIM41Q8WV44 630 aa25.25■■□□□ 1.63
PSMD11-203ENST00000469475 RIMBP3CA6NJZ7 1639 aa25.21■■□□□ 1.63
PSMD11-203ENST00000469475 RIMBP3BA6NNM3 1639 aa25.21■■□□□ 1.63
PSMD11-203ENST00000469475 RIMBP3Q9UFD9 1639 aa25.21■■□□□ 1.63
PSMD11-203ENST00000469475 SYNJ2O15056 1496 aa25.21■■□□□ 1.63
PSMD11-203ENST00000469475 CHMP7Q8WUX9 453 aaPredicted RBP25.19■■□□□ 1.62
PSMD11-203ENST00000469475 ARHGEF11O15085 1522 aa25.18■■□□□ 1.62
PSMD11-203ENST00000469475 CLASP1Q7Z460 1538 aa25.14■■□□□ 1.62
PSMD11-203ENST00000469475 ADAMTS12P58397 1594 aa25.11■■□□□ 1.61
PSMD11-203ENST00000469475 GRIN2AQ12879 1464 aa25.05■■□□□ 1.6
PSMD11-203ENST00000469475 ERICH3Q5RHP9 1530 aa25.04■■□□□ 1.6
PSMD11-203ENST00000469475 FHAD1B1AJZ9 1412 aa25.02■■□□□ 1.6
PSMD11-203ENST00000469475 ARAP1Q96P48 1450 aa25.01■■□□□ 1.59
PSMD11-203ENST00000469475 CEP170Q5SW79 1584 aa24.98■■□□□ 1.59
PSMD11-203ENST00000469475 CYB5RLQ6IPT4 315 aa24.97■■□□□ 1.59
PSMD11-203ENST00000469475 NUP160Q12769 1436 aa24.96■■□□□ 1.59
PSMD11-203ENST00000469475 IGF1RP08069 1367 aa24.93■■□□□ 1.58
PSMD11-203ENST00000469475 KIF27Q86VH2 1401 aa24.91■■□□□ 1.58
PSMD11-203ENST00000469475 ERCC6L2Q5T890 1561 aa24.88■■□□□ 1.57
PSMD11-203ENST00000469475 RUSC2Q8N2Y8 1516 aa24.83■■□□□ 1.57
PSMD11-203ENST00000469475 SHROOM2Q13796 1616 aa24.78■■□□□ 1.56
PSMD11-203ENST00000469475 CUL7Q14999 1698 aa24.73■■□□□ 1.55
PSMD11-203ENST00000469475 CARMIL1Q5VZK9 1371 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms