RNA–Protein interactions for RNA: ENST00000469451.1

SNRPE-203, Transcript of small nuclear ribonucleoprotein polypeptide E, humanhuman

TSL 3

Gene SNRPE, Length 248 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPE-203ENST00000469451 NISCHQ9Y2I1 1504 aa28.2■■■□□ 2.1
SNRPE-203ENST00000469451 CCDC180Q9P1Z9 1646 aa25.1■■□□□ 1.61
SNRPE-203ENST00000469451 ABCC9O60706 1549 aa24.91■■□□□ 1.58
SNRPE-203ENST00000469451 DCAF8L2P0C7V8 631 aa23.97■■□□□ 1.43
SNRPE-203ENST00000469451 RB1CC1Q8TDY2 1594 aa23.89■■□□□ 1.41
SNRPE-203ENST00000469451 NACADO15069 1562 aa23.8■■□□□ 1.4
SNRPE-203ENST00000469451 MYO15BQ96JP2 1530 aa23.58■■□□□ 1.36
SNRPE-203ENST00000469451 ZCCHC6Q5VYS8 1495 aaKnown RBP23.41■■□□□ 1.34
SNRPE-203ENST00000469451 DCAF1Q9Y4B6 1507 aa23.35■■□□□ 1.33
SNRPE-203ENST00000469451 PABPN1Q86U42 306 aaKnown RBP eCLIP23.31■■□□□ 1.32
SNRPE-203ENST00000469451 DNAJC5BQ9UF47 199 aa22.99■■□□□ 1.27
SNRPE-203ENST00000469451 SHROOM4Q9ULL8 1493 aa22.98■■□□□ 1.27
SNRPE-203ENST00000469451 BICRAQ9NZM4 1560 aa22.93■■□□□ 1.26
SNRPE-203ENST00000469451 UNC13AQ9UPW8 1703 aa22.92■■□□□ 1.26
SNRPE-203ENST00000469451 SCRIBQ14160 1630 aa22.9■■□□□ 1.26
SNRPE-203ENST00000469451 EIF4G1Q04637 1599 aaKnown RBP22.49■■□□□ 1.19
SNRPE-203ENST00000469451 CECR2Q9BXF3 1484 aa22.47■■□□□ 1.19
SNRPE-203ENST00000469451 CC2D2AQ9P2K1 1620 aa22.43■■□□□ 1.18
SNRPE-203ENST00000469451 NCAPD3P42695 1498 aa21.97■■□□□ 1.11
SNRPE-203ENST00000469451 BAZ1AQ9NRL2 1556 aaPredicted RBP21.95■■□□□ 1.1
SNRPE-203ENST00000469451 SMARCA2P51531 1590 aa21.93■■□□□ 1.1
SNRPE-203ENST00000469451 ATAD2BQ9ULI0 1458 aa21.9■■□□□ 1.1
SNRPE-203ENST00000469451 SMARCA4P51532 1647 aa21.87■■□□□ 1.09
SNRPE-203ENST00000469451 BAZ1BQ9UIG0 1483 aaKnown RBP21.79■■□□□ 1.08
SNRPE-203ENST00000469451 HMGXB3Q12766 1538 aa21.79■■□□□ 1.08
SNRPE-203ENST00000469451 PEG3Q9GZU2 1588 aa21.67■■□□□ 1.06
SNRPE-203ENST00000469451 ERCC6Q03468 1493 aa21.66■■□□□ 1.06
SNRPE-203ENST00000469451 MROH2BQ7Z745 1585 aa21.65■■□□□ 1.06
SNRPE-203ENST00000469451 PDS5BQ9NTI5 1447 aa21.45■■□□□ 1.02
SNRPE-203ENST00000469451 CUX2O14529 1486 aa21.45■■□□□ 1.02
SNRPE-203ENST00000469451 RSF1Q96T23 1441 aaPredicted RBP21.41■■□□□ 1.02
SNRPE-203ENST00000469451 LAMC3Q9Y6N6 1575 aa21.4■■□□□ 1.02
SNRPE-203ENST00000469451 CADPSQ9ULU8 1353 aa21.38■■□□□ 1.01
SNRPE-203ENST00000469451 NESP48681 1621 aa21.38■■□□□ 1.01
SNRPE-203ENST00000469451 WIZO95785 1651 aa21.34■■□□□ 1.01
SNRPE-203ENST00000469451 TOP2AP11388 1531 aaKnown RBP21.24■□□□□ 0.99
SNRPE-203ENST00000469451 CFTRP13569 1480 aa21.13■□□□□ 0.97
SNRPE-203ENST00000469451 CEP164Q9UPV0 1460 aa21.12■□□□□ 0.97
SNRPE-203ENST00000469451 MRC2Q9UBG0 1479 aa21.11■□□□□ 0.97
SNRPE-203ENST00000469451 DNAJC5Q9H3Z4 198 aa21.1■□□□□ 0.97
SNRPE-203ENST00000469451 FANCD2Q9BXW9 1451 aa21.09■□□□□ 0.97
SNRPE-203ENST00000469451 THOC2Q8NI27 1593 aaKnown RBP21.05■□□□□ 0.96
SNRPE-203ENST00000469451 CCDC88BA6NC98 1476 aa21.01■□□□□ 0.95
SNRPE-203ENST00000469451 KIF21AQ7Z4S6 1674 aa20.99■□□□□ 0.95
SNRPE-203ENST00000469451 WDR62O43379 1518 aa20.95■□□□□ 0.94
SNRPE-203ENST00000469451 SUPT5HO00267 1087 aaKnown RBP20.87■□□□□ 0.93
SNRPE-203ENST00000469451 ABCC8Q09428 1581 aa20.83■□□□□ 0.92
SNRPE-203ENST00000469451 URB2Q14146 1524 aaKnown RBP20.77■□□□□ 0.92
SNRPE-203ENST00000469451 IFT140Q96RY7 1462 aa20.7■□□□□ 0.9
SNRPE-203ENST00000469451 PRDM2Q13029 1718 aa20.67■□□□□ 0.9
SNRPE-203ENST00000469451 TOPBP1Q92547 1522 aa20.66■□□□□ 0.9
SNRPE-203ENST00000469451 OSCARQ8IYS5 282 aa20.65■□□□□ 0.9
SNRPE-203ENST00000469451 DNMBPQ6XZF7 1577 aa20.61■□□□□ 0.89
SNRPE-203ENST00000469451 SOGA1O94964 1423 aa20.51■□□□□ 0.87
SNRPE-203ENST00000469451 POLA1P09884 1462 aaPredicted RBP20.47■□□□□ 0.87
SNRPE-203ENST00000469451 ZNF608Q9ULD9 1512 aaPredicted RBP20.47■□□□□ 0.87
SNRPE-203ENST00000469451 FBLN2P98095 1184 aa20.44■□□□□ 0.86
SNRPE-203ENST00000469451 AQRO60306 1485 aaKnown RBP eCLIP20.41■□□□□ 0.863e-7■■■■□ 20.2
SNRPE-203ENST00000469451 FGD5Q6ZNL6 1462 aa20.39■□□□□ 0.85
SNRPE-203ENST00000469451 TDRD9Q8NDG6 1382 aaKnown RBP20.38■□□□□ 0.85
SNRPE-203ENST00000469451 TRIM41Q8WV44 630 aa20.37■□□□□ 0.85
SNRPE-203ENST00000469451 RAD54L2Q9Y4B4 1467 aa20.37■□□□□ 0.85
SNRPE-203ENST00000469451 EIF4G3O43432 1585 aaKnown RBP20.35■□□□□ 0.85
SNRPE-203ENST00000469451 CHMP7Q8WUX9 453 aaPredicted RBP20.35■□□□□ 0.85
SNRPE-203ENST00000469451 CUX1P39880 1505 aa20.34■□□□□ 0.85
SNRPE-203ENST00000469451 WDR97A6NE52 1622 aa20.33■□□□□ 0.84
SNRPE-203ENST00000469451 TARBP1Q13395 1621 aaKnown RBP20.33■□□□□ 0.84
SNRPE-203ENST00000469451 WRNQ14191 1432 aaPredicted RBP eCLIP20.32■□□□□ 0.84
SNRPE-203ENST00000469451 GRIN2BQ13224 1484 aa20.28■□□□□ 0.84
SNRPE-203ENST00000469451 MAGI1Q96QZ7 1491 aaPredicted RBP20.24■□□□□ 0.83
SNRPE-203ENST00000469451 GAPVD1Q14C86 1478 aa20.23■□□□□ 0.83
SNRPE-203ENST00000469451 SNAPC4Q5SXM2 1469 aa20.21■□□□□ 0.83
SNRPE-203ENST00000469451 ABCA10Q8WWZ4 1543 aa20.21■□□□□ 0.83
SNRPE-203ENST00000469451 SYNJ2O15056 1496 aa20.16■□□□□ 0.82
SNRPE-203ENST00000469451 TOP2BQ02880 1626 aa20.13■□□□□ 0.81
SNRPE-203ENST00000469451 SYNJ1O43426 1573 aa20.09■□□□□ 0.81
SNRPE-203ENST00000469451 CYB5RLQ6IPT4 315 aa20.09■□□□□ 0.81
SNRPE-203ENST00000469451 ARHGEF11O15085 1522 aa20.08■□□□□ 0.81
SNRPE-203ENST00000469451 BIVM-ERCC5R4GMW8 1640 aa20.05■□□□□ 0.8
SNRPE-203ENST00000469451 FHAD1B1AJZ9 1412 aa20.02■□□□□ 0.8
SNRPE-203ENST00000469451 RIMBP3CA6NJZ7 1639 aa20.02■□□□□ 0.8
SNRPE-203ENST00000469451 RIMBP3BA6NNM3 1639 aa20.02■□□□□ 0.8
SNRPE-203ENST00000469451 RIMBP3Q9UFD9 1639 aa20.02■□□□□ 0.8
SNRPE-203ENST00000469451 CHD1O14646 1710 aa20.02■□□□□ 0.8
SNRPE-203ENST00000469451 ABCA5Q8WWZ7 1642 aa20.01■□□□□ 0.79
SNRPE-203ENST00000469451 ERICH3Q5RHP9 1530 aa19.98■□□□□ 0.79
SNRPE-203ENST00000469451 KIF27Q86VH2 1401 aa19.96■□□□□ 0.79
SNRPE-203ENST00000469451 GRIN2AQ12879 1464 aa19.96■□□□□ 0.79
SNRPE-203ENST00000469451 PBRM1Q86U86 1689 aa19.95■□□□□ 0.78
SNRPE-203ENST00000469451 CLASP1Q7Z460 1538 aa19.92■□□□□ 0.78
SNRPE-203ENST00000469451 ADAMTS12P58397 1594 aa19.88■□□□□ 0.77
SNRPE-203ENST00000469451 TRHP20396 242 aaPredicted RBP19.88■□□□□ 0.77
SNRPE-203ENST00000469451 ARAP1Q96P48 1450 aa19.87■□□□□ 0.77
SNRPE-203ENST00000469451 NUP160Q12769 1436 aa19.85■□□□□ 0.77
SNRPE-203ENST00000469451 JPH4Q96JJ6 628 aa19.81■□□□□ 0.76
SNRPE-203ENST00000469451 IGF1RP08069 1367 aa19.81■□□□□ 0.76
SNRPE-203ENST00000469451 CARMIL1Q5VZK9 1371 aa19.75■□□□□ 0.75
SNRPE-203ENST00000469451 CEP170Q5SW79 1584 aa19.74■□□□□ 0.75
SNRPE-203ENST00000469451 PRG4Q92954 1404 aaPredicted RBP19.73■□□□□ 0.75
SNRPE-203ENST00000469451 NPM1P06748 294 aaKnown RBP eCLIP19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms