RNA–Protein interactions for RNA: ENST00000469126.5

HM13-213, Transcript of histocompatibility minor 13, humanhuman

TSL 5

Gene HM13, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HM13-213ENST00000469126 NISCHQ9Y2I1 1504 aa37.1■■■■□ 3.53
HM13-213ENST00000469126 CCDC180Q9P1Z9 1646 aa33.22■■■□□ 2.91
HM13-213ENST00000469126 ABCC9O60706 1549 aa33.22■■■□□ 2.91
HM13-213ENST00000469126 RB1CC1Q8TDY2 1594 aa31.58■■■□□ 2.65
HM13-213ENST00000469126 DCAF8L2P0C7V8 631 aa31.46■■■□□ 2.63
HM13-213ENST00000469126 NACADO15069 1562 aa31.35■■■□□ 2.61
HM13-213ENST00000469126 DNAJC5BQ9UF47 199 aa31.03■■■□□ 2.56
HM13-213ENST00000469126 PABPN1Q86U42 306 aaKnown RBP eCLIP30.98■■■□□ 2.55
HM13-213ENST00000469126 UNC13AQ9UPW8 1703 aa30.97■■■□□ 2.55
HM13-213ENST00000469126 MYO15BQ96JP2 1530 aa30.88■■■□□ 2.53
HM13-213ENST00000469126 ZCCHC6Q5VYS8 1495 aaKnown RBP30.76■■■□□ 2.51
HM13-213ENST00000469126 BICRAQ9NZM4 1560 aa30.67■■■□□ 2.5
HM13-213ENST00000469126 DCAF1Q9Y4B6 1507 aa30.56■■■□□ 2.48
HM13-213ENST00000469126 SCRIBQ14160 1630 aa30.4■■■□□ 2.46
HM13-213ENST00000469126 SHROOM4Q9ULL8 1493 aa30.12■■■□□ 2.41
HM13-213ENST00000469126 CC2D2AQ9P2K1 1620 aa29.97■■■□□ 2.39
HM13-213ENST00000469126 EIF4G1Q04637 1599 aaKnown RBP29.91■■■□□ 2.38
HM13-213ENST00000469126 CECR2Q9BXF3 1484 aa29.86■■■□□ 2.37
HM13-213ENST00000469126 SMARCA4P51532 1647 aa28.94■■■□□ 2.22
HM13-213ENST00000469126 NCAPD3P42695 1498 aa28.93■■■□□ 2.22
HM13-213ENST00000469126 ATAD2BQ9ULI0 1458 aa28.91■■■□□ 2.22
HM13-213ENST00000469126 SMARCA2P51531 1590 aa28.82■■■□□ 2.2
HM13-213ENST00000469126 BAZ1AQ9NRL2 1556 aaPredicted RBP28.79■■■□□ 2.2
HM13-213ENST00000469126 HMGXB3Q12766 1538 aa28.74■■■□□ 2.19
HM13-213ENST00000469126 BAZ1BQ9UIG0 1483 aaKnown RBP28.66■■■□□ 2.18
HM13-213ENST00000469126 ERCC6Q03468 1493 aa28.65■■■□□ 2.18
HM13-213ENST00000469126 MROH2BQ7Z745 1585 aa28.64■■■□□ 2.18
HM13-213ENST00000469126 NESP48681 1621 aa28.58■■■□□ 2.17
HM13-213ENST00000469126 PEG3Q9GZU2 1588 aa28.57■■■□□ 2.16
HM13-213ENST00000469126 CUX2O14529 1486 aa28.45■■■□□ 2.14
HM13-213ENST00000469126 WIZO95785 1651 aa28.35■■■□□ 2.13
HM13-213ENST00000469126 DNAJC5Q9H3Z4 198 aa28.34■■■□□ 2.13
HM13-213ENST00000469126 LAMC3Q9Y6N6 1575 aa28.29■■■□□ 2.12
HM13-213ENST00000469126 KIF21AQ7Z4S6 1674 aa28.23■■■□□ 2.11
HM13-213ENST00000469126 THOC2Q8NI27 1593 aaKnown RBP28.19■■■□□ 2.1
HM13-213ENST00000469126 PDS5BQ9NTI5 1447 aa28.13■■■□□ 2.09
HM13-213ENST00000469126 CADPSQ9ULU8 1353 aa28.11■■■□□ 2.09
HM13-213ENST00000469126 RSF1Q96T23 1441 aaPredicted RBP28.06■■■□□ 2.08
HM13-213ENST00000469126 TOP2AP11388 1531 aaKnown RBP27.92■■■□□ 2.06
HM13-213ENST00000469126 MRC2Q9UBG0 1479 aa27.9■■■□□ 2.06
HM13-213ENST00000469126 CEP164Q9UPV0 1460 aa27.83■■■□□ 2.05
HM13-213ENST00000469126 FANCD2Q9BXW9 1451 aa27.82■■■□□ 2.04
HM13-213ENST00000469126 WDR62O43379 1518 aa27.8■■■□□ 2.04
HM13-213ENST00000469126 CFTRP13569 1480 aa27.79■■■□□ 2.04
HM13-213ENST00000469126 CCDC88BA6NC98 1476 aa27.64■■■□□ 2.01
HM13-213ENST00000469126 PRDM2Q13029 1718 aa27.59■■■□□ 2.01
HM13-213ENST00000469126 URB2Q14146 1524 aaKnown RBP27.59■■■□□ 2.01
HM13-213ENST00000469126 TRIM41Q8WV44 630 aa27.3■■□□□ 1.96
HM13-213ENST00000469126 TOPBP1Q92547 1522 aa27.3■■□□□ 1.96
HM13-213ENST00000469126 ZNF608Q9ULD9 1512 aaPredicted RBP27.26■■□□□ 1.95
HM13-213ENST00000469126 OSCARQ8IYS5 282 aa27.24■■□□□ 1.95
HM13-213ENST00000469126 IFT140Q96RY7 1462 aa27.24■■□□□ 1.95
HM13-213ENST00000469126 DNMBPQ6XZF7 1577 aa27.21■■□□□ 1.95
HM13-213ENST00000469126 ABCC8Q09428 1581 aa27.18■■□□□ 1.94
HM13-213ENST00000469126 EIF4G3O43432 1585 aaKnown RBP27.09■■□□□ 1.93
HM13-213ENST00000469126 SUPT5HO00267 1087 aaKnown RBP27.07■■□□□ 1.92
HM13-213ENST00000469126 TARBP1Q13395 1621 aaKnown RBP27.05■■□□□ 1.92
HM13-213ENST00000469126 AQRO60306 1485 aaKnown RBP eCLIP27.03■■□□□ 1.926e-8■■■■□ 25.7
HM13-213ENST00000469126 POLA1P09884 1462 aaPredicted RBP27.03■■□□□ 1.92
HM13-213ENST00000469126 RAD54L2Q9Y4B4 1467 aa26.98■■□□□ 1.91
HM13-213ENST00000469126 CHD1O14646 1710 aa26.93■■□□□ 1.9
HM13-213ENST00000469126 SOGA1O94964 1423 aa26.92■■□□□ 1.9
HM13-213ENST00000469126 RIMBP3CA6NJZ7 1639 aa26.91■■□□□ 1.9
HM13-213ENST00000469126 RIMBP3BA6NNM3 1639 aa26.91■■□□□ 1.9
HM13-213ENST00000469126 RIMBP3Q9UFD9 1639 aa26.91■■□□□ 1.9
HM13-213ENST00000469126 FGD5Q6ZNL6 1462 aa26.9■■□□□ 1.9
HM13-213ENST00000469126 FBLN2P98095 1184 aa26.9■■□□□ 1.9
HM13-213ENST00000469126 CUX1P39880 1505 aa26.9■■□□□ 1.9
HM13-213ENST00000469126 TDRD9Q8NDG6 1382 aaKnown RBP26.89■■□□□ 1.9
HM13-213ENST00000469126 ARHGEF11O15085 1522 aa26.8■■□□□ 1.88
HM13-213ENST00000469126 SNAPC4Q5SXM2 1469 aa26.74■■□□□ 1.87
HM13-213ENST00000469126 WDR97A6NE52 1622 aa26.68■■□□□ 1.86
HM13-213ENST00000469126 CYB5RLQ6IPT4 315 aa26.67■■□□□ 1.86
HM13-213ENST00000469126 CHMP7Q8WUX9 453 aaPredicted RBP26.65■■□□□ 1.86
HM13-213ENST00000469126 GRIN2BQ13224 1484 aa26.65■■□□□ 1.86
HM13-213ENST00000469126 PBRM1Q86U86 1689 aa26.63■■□□□ 1.85
HM13-213ENST00000469126 MAGI1Q96QZ7 1491 aaPredicted RBP26.61■■□□□ 1.85
HM13-213ENST00000469126 GAPVD1Q14C86 1478 aa26.59■■□□□ 1.85
HM13-213ENST00000469126 ARAP1Q96P48 1450 aa26.55■■□□□ 1.84
HM13-213ENST00000469126 ABCA10Q8WWZ4 1543 aa26.55■■□□□ 1.84
HM13-213ENST00000469126 SYNJ1O43426 1573 aa26.54■■□□□ 1.84
HM13-213ENST00000469126 SYNJ2O15056 1496 aa26.53■■□□□ 1.84
HM13-213ENST00000469126 CLASP1Q7Z460 1538 aa26.52■■□□□ 1.84
HM13-213ENST00000469126 ABCA5Q8WWZ7 1642 aa26.52■■□□□ 1.84
HM13-213ENST00000469126 BIVM-ERCC5R4GMW8 1640 aa26.48■■□□□ 1.83
HM13-213ENST00000469126 WRNQ14191 1432 aaPredicted RBP eCLIP26.48■■□□□ 1.83
HM13-213ENST00000469126 TOP2BQ02880 1626 aa26.47■■□□□ 1.83
HM13-213ENST00000469126 TRHP20396 242 aaPredicted RBP26.36■■□□□ 1.81
HM13-213ENST00000469126 ADAMTS12P58397 1594 aa26.33■■□□□ 1.8
HM13-213ENST00000469126 GRIN2AQ12879 1464 aa26.31■■□□□ 1.8
HM13-213ENST00000469126 CEP170Q5SW79 1584 aa26.24■■□□□ 1.79
HM13-213ENST00000469126 FHAD1B1AJZ9 1412 aa26.23■■□□□ 1.79
HM13-213ENST00000469126 ERICH3Q5RHP9 1530 aa26.21■■□□□ 1.79
HM13-213ENST00000469126 ERCC6L2Q5T890 1561 aa26.2■■□□□ 1.79
HM13-213ENST00000469126 NUP160Q12769 1436 aa26.18■■□□□ 1.78
HM13-213ENST00000469126 SHROOM2Q13796 1616 aa26.06■■□□□ 1.76
HM13-213ENST00000469126 PRG4Q92954 1404 aaPredicted RBP25.98■■□□□ 1.75
HM13-213ENST00000469126 JPH4Q96JJ6 628 aa25.97■■□□□ 1.75
HM13-213ENST00000469126 KIF27Q86VH2 1401 aa25.96■■□□□ 1.75
HM13-213ENST00000469126 RUSC2Q8N2Y8 1516 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms