RNA–Protein interactions for RNA: ENST00000468543.5

ACTG2-208, Transcript of actin, gamma 2, smooth muscle, enteric, humanhuman

TSL 2

Gene ACTG2, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTG2-208ENST00000468543 NISCHQ9Y2I1 1504 aa25.39■■□□□ 1.66
ACTG2-208ENST00000468543 ABCC9O60706 1549 aa22.69■■□□□ 1.22
ACTG2-208ENST00000468543 CCDC180Q9P1Z9 1646 aa22.58■■□□□ 1.21
ACTG2-208ENST00000468543 DCAF8L2P0C7V8 631 aa21.58■■□□□ 1.05
ACTG2-208ENST00000468543 RB1CC1Q8TDY2 1594 aa21.54■■□□□ 1.04
ACTG2-208ENST00000468543 NACADO15069 1562 aa21.43■■□□□ 1.02
ACTG2-208ENST00000468543 DNAJC5BQ9UF47 199 aa21.28■■□□□ 1
ACTG2-208ENST00000468543 PABPN1Q86U42 306 aaKnown RBP eCLIP21.24■□□□□ 0.99
ACTG2-208ENST00000468543 MYO15BQ96JP2 1530 aa21.15■□□□□ 0.98
ACTG2-208ENST00000468543 ZCCHC6Q5VYS8 1495 aaKnown RBP21.04■□□□□ 0.96
ACTG2-208ENST00000468543 DCAF1Q9Y4B6 1507 aa20.93■□□□□ 0.94
ACTG2-208ENST00000468543 UNC13AQ9UPW8 1703 aa20.92■□□□□ 0.94
ACTG2-208ENST00000468543 BICRAQ9NZM4 1560 aa20.91■□□□□ 0.94
ACTG2-208ENST00000468543 SCRIBQ14160 1630 aa20.7■□□□□ 0.9
ACTG2-208ENST00000468543 SHROOM4Q9ULL8 1493 aa20.61■□□□□ 0.89
ACTG2-208ENST00000468543 CC2D2AQ9P2K1 1620 aa20.42■□□□□ 0.86
ACTG2-208ENST00000468543 CECR2Q9BXF3 1484 aa20.41■□□□□ 0.86
ACTG2-208ENST00000468543 EIF4G1Q04637 1599 aaKnown RBP20.4■□□□□ 0.86
ACTG2-208ENST00000468543 NCAPD3P42695 1498 aa19.84■□□□□ 0.77
ACTG2-208ENST00000468543 ATAD2BQ9ULI0 1458 aa19.8■□□□□ 0.76
ACTG2-208ENST00000468543 SMARCA4P51532 1647 aa19.73■□□□□ 0.75
ACTG2-208ENST00000468543 SMARCA2P51531 1590 aa19.7■□□□□ 0.74
ACTG2-208ENST00000468543 BAZ1AQ9NRL2 1556 aaPredicted RBP19.67■□□□□ 0.74
ACTG2-208ENST00000468543 HMGXB3Q12766 1538 aa19.62■□□□□ 0.73
ACTG2-208ENST00000468543 BAZ1BQ9UIG0 1483 aaKnown RBP19.6■□□□□ 0.73
ACTG2-208ENST00000468543 MROH2BQ7Z745 1585 aa19.58■□□□□ 0.73
ACTG2-208ENST00000468543 ERCC6Q03468 1493 aa19.57■□□□□ 0.72
ACTG2-208ENST00000468543 PEG3Q9GZU2 1588 aa19.52■□□□□ 0.71
ACTG2-208ENST00000468543 NESP48681 1621 aa19.51■□□□□ 0.71
ACTG2-208ENST00000468543 CUX2O14529 1486 aa19.44■□□□□ 0.7
ACTG2-208ENST00000468543 DNAJC5Q9H3Z4 198 aa19.43■□□□□ 0.7
ACTG2-208ENST00000468543 LAMC3Q9Y6N6 1575 aa19.3■□□□□ 0.68
ACTG2-208ENST00000468543 WIZO95785 1651 aa19.3■□□□□ 0.68
ACTG2-208ENST00000468543 CADPSQ9ULU8 1353 aa19.29■□□□□ 0.68
ACTG2-208ENST00000468543 PDS5BQ9NTI5 1447 aa19.28■□□□□ 0.68
ACTG2-208ENST00000468543 RSF1Q96T23 1441 aaPredicted RBP19.25■□□□□ 0.67
ACTG2-208ENST00000468543 THOC2Q8NI27 1593 aaKnown RBP19.17■□□□□ 0.66
ACTG2-208ENST00000468543 KIF21AQ7Z4S6 1674 aa19.11■□□□□ 0.65
ACTG2-208ENST00000468543 TOP2AP11388 1531 aaKnown RBP19.07■□□□□ 0.64
ACTG2-208ENST00000468543 MRC2Q9UBG0 1479 aa19.07■□□□□ 0.64
ACTG2-208ENST00000468543 CFTRP13569 1480 aa19.04■□□□□ 0.64
ACTG2-208ENST00000468543 FANCD2Q9BXW9 1451 aa19.03■□□□□ 0.64
ACTG2-208ENST00000468543 CEP164Q9UPV0 1460 aa19.02■□□□□ 0.63
ACTG2-208ENST00000468543 WDR62O43379 1518 aa18.98■□□□□ 0.63
ACTG2-208ENST00000468543 CCDC88BA6NC98 1476 aa18.93■□□□□ 0.62
ACTG2-208ENST00000468543 URB2Q14146 1524 aaKnown RBP18.85■□□□□ 0.61
ACTG2-208ENST00000468543 OSCARQ8IYS5 282 aa18.7■□□□□ 0.58
ACTG2-208ENST00000468543 TOPBP1Q92547 1522 aa18.66■□□□□ 0.58
ACTG2-208ENST00000468543 TRIM41Q8WV44 630 aa18.66■□□□□ 0.58
ACTG2-208ENST00000468543 IFT140Q96RY7 1462 aa18.64■□□□□ 0.57
ACTG2-208ENST00000468543 ZNF608Q9ULD9 1512 aaPredicted RBP18.64■□□□□ 0.57
ACTG2-208ENST00000468543 PRDM2Q13029 1718 aa18.63■□□□□ 0.57
ACTG2-208ENST00000468543 ABCC8Q09428 1581 aa18.61■□□□□ 0.57
ACTG2-208ENST00000468543 SUPT5HO00267 1087 aaKnown RBP18.6■□□□□ 0.57
ACTG2-208ENST00000468543 DNMBPQ6XZF7 1577 aa18.55■□□□□ 0.56
ACTG2-208ENST00000468543 AQRO60306 1485 aaKnown RBP eCLIP18.51■□□□□ 0.55
ACTG2-208ENST00000468543 POLA1P09884 1462 aaPredicted RBP18.49■□□□□ 0.55
ACTG2-208ENST00000468543 RAD54L2Q9Y4B4 1467 aa18.46■□□□□ 0.55
ACTG2-208ENST00000468543 SOGA1O94964 1423 aa18.46■□□□□ 0.55
ACTG2-208ENST00000468543 FBLN2P98095 1184 aa18.44■□□□□ 0.54
ACTG2-208ENST00000468543 TDRD9Q8NDG6 1382 aaKnown RBP18.43■□□□□ 0.54
ACTG2-208ENST00000468543 EIF4G3O43432 1585 aaKnown RBP18.43■□□□□ 0.54
ACTG2-208ENST00000468543 TARBP1Q13395 1621 aaKnown RBP18.43■□□□□ 0.54
ACTG2-208ENST00000468543 FGD5Q6ZNL6 1462 aa18.39■□□□□ 0.53
ACTG2-208ENST00000468543 CUX1P39880 1505 aa18.39■□□□□ 0.53
ACTG2-208ENST00000468543 ARHGEF11O15085 1522 aa18.29■□□□□ 0.52
ACTG2-208ENST00000468543 CHMP7Q8WUX9 453 aaPredicted RBP18.29■□□□□ 0.52
ACTG2-208ENST00000468543 RIMBP3CA6NJZ7 1639 aa18.29■□□□□ 0.52
ACTG2-208ENST00000468543 RIMBP3BA6NNM3 1639 aa18.29■□□□□ 0.52
ACTG2-208ENST00000468543 RIMBP3Q9UFD9 1639 aa18.29■□□□□ 0.52
ACTG2-208ENST00000468543 CYB5RLQ6IPT4 315 aa18.28■□□□□ 0.52
ACTG2-208ENST00000468543 SNAPC4Q5SXM2 1469 aa18.27■□□□□ 0.52
ACTG2-208ENST00000468543 GRIN2BQ13224 1484 aa18.24■□□□□ 0.51
ACTG2-208ENST00000468543 CHD1O14646 1710 aa18.22■□□□□ 0.51
ACTG2-208ENST00000468543 GAPVD1Q14C86 1478 aa18.2■□□□□ 0.5
ACTG2-208ENST00000468543 MAGI1Q96QZ7 1491 aaPredicted RBP18.2■□□□□ 0.5
ACTG2-208ENST00000468543 WDR97A6NE52 1622 aa18.2■□□□□ 0.5
ACTG2-208ENST00000468543 ABCA10Q8WWZ4 1543 aa18.18■□□□□ 0.5
ACTG2-208ENST00000468543 WRNQ14191 1432 aaPredicted RBP eCLIP18.17■□□□□ 0.5
ACTG2-208ENST00000468543 SYNJ2O15056 1496 aa18.15■□□□□ 0.5
ACTG2-208ENST00000468543 ARAP1Q96P48 1450 aa18.14■□□□□ 0.49
ACTG2-208ENST00000468543 CLASP1Q7Z460 1538 aa18.09■□□□□ 0.49
ACTG2-208ENST00000468543 SYNJ1O43426 1573 aa18.08■□□□□ 0.49
ACTG2-208ENST00000468543 AEBP2Q6ZN18 517 aaPredicted RBP18.08■□□□□ 0.48
ACTG2-208ENST00000468543 TOP2BQ02880 1626 aa18.07■□□□□ 0.48
ACTG2-208ENST00000468543 ABCA5Q8WWZ7 1642 aa18.06■□□□□ 0.48
ACTG2-208ENST00000468543 TRHP20396 242 aaPredicted RBP18.05■□□□□ 0.48
ACTG2-208ENST00000468543 PBRM1Q86U86 1689 aa18.03■□□□□ 0.48
ACTG2-208ENST00000468543 BIVM-ERCC5R4GMW8 1640 aa18.01■□□□□ 0.47
ACTG2-208ENST00000468543 GRIN2AQ12879 1464 aa17.99■□□□□ 0.47
ACTG2-208ENST00000468543 FHAD1B1AJZ9 1412 aa17.98■□□□□ 0.47
ACTG2-208ENST00000468543 NUP160Q12769 1436 aa17.94■□□□□ 0.46
ACTG2-208ENST00000468543 ADAMTS12P58397 1594 aa17.94■□□□□ 0.46
ACTG2-208ENST00000468543 ERICH3Q5RHP9 1530 aa17.93■□□□□ 0.46
ACTG2-208ENST00000468543 CEP170Q5SW79 1584 aa17.89■□□□□ 0.45
ACTG2-208ENST00000468543 ERCC6L2Q5T890 1561 aa17.86■□□□□ 0.45
ACTG2-208ENST00000468543 JPH4Q96JJ6 628 aa17.85■□□□□ 0.45
ACTG2-208ENST00000468543 IGF1RP08069 1367 aa17.83■□□□□ 0.45
ACTG2-208ENST00000468543 KIF27Q86VH2 1401 aa17.81■□□□□ 0.44
ACTG2-208ENST00000468543 PRG4Q92954 1404 aaPredicted RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 180.5 ms