RNA–Protein interactions for RNA: ENST00000468316.1

PRKRIP1-203, Transcript of PRKR interacting protein 1, humanhuman

TSL 1 (best)

Gene PRKRIP1, Length 2,045 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKRIP1-203ENST00000468316 NISCHQ9Y2I1 1504 aa35.39■■■■□ 3.26
PRKRIP1-203ENST00000468316 CCDC180Q9P1Z9 1646 aa30.74■■■□□ 2.51
PRKRIP1-203ENST00000468316 ZCCHC6Q5VYS8 1495 aaKnown RBP29.77■■■□□ 2.36
PRKRIP1-203ENST00000468316 DCAF1Q9Y4B6 1507 aa29.25■■■□□ 2.27
PRKRIP1-203ENST00000468316 DCAF8L2P0C7V8 631 aa29.16■■■□□ 2.26
PRKRIP1-203ENST00000468316 SHROOM4Q9ULL8 1493 aa29.03■■■□□ 2.24
PRKRIP1-203ENST00000468316 ABCC9O60706 1549 aa28.88■■■□□ 2.21
PRKRIP1-203ENST00000468316 MYO15BQ96JP2 1530 aa28.82■■■□□ 2.2
PRKRIP1-203ENST00000468316 NACADO15069 1562 aa28.58■■■□□ 2.17
PRKRIP1-203ENST00000468316 SCRIBQ14160 1630 aa28.31■■■□□ 2.12
PRKRIP1-203ENST00000468316 RB1CC1Q8TDY2 1594 aa28.28■■■□□ 2.12
PRKRIP1-203ENST00000468316 SUPT5HO00267 1087 aaKnown RBP28.05■■■□□ 2.08
PRKRIP1-203ENST00000468316 UNC13AQ9UPW8 1703 aa27.74■■■□□ 2.03
PRKRIP1-203ENST00000468316 RSF1Q96T23 1441 aaPredicted RBP27.54■■■□□ 2
PRKRIP1-203ENST00000468316 CECR2Q9BXF3 1484 aa27.49■■□□□ 1.99
PRKRIP1-203ENST00000468316 BICRAQ9NZM4 1560 aa27.44■■□□□ 1.98
PRKRIP1-203ENST00000468316 MROH2BQ7Z745 1585 aa27.36■■□□□ 1.97
PRKRIP1-203ENST00000468316 BAZ1AQ9NRL2 1556 aaPredicted RBP27.3■■□□□ 1.96
PRKRIP1-203ENST00000468316 PABPN1Q86U42 306 aaKnown RBP eCLIP27.29■■□□□ 1.961e-6■■■■□ 20.2
PRKRIP1-203ENST00000468316 SMARCA4P51532 1647 aa27.15■■□□□ 1.94
PRKRIP1-203ENST00000468316 WIZO95785 1651 aa27.15■■□□□ 1.94
PRKRIP1-203ENST00000468316 CHIC1Q5VXU3 224 aa26.97■■□□□ 1.91
PRKRIP1-203ENST00000468316 TOP2AP11388 1531 aaKnown RBP26.85■■□□□ 1.89
PRKRIP1-203ENST00000468316 PEG3Q9GZU2 1588 aa26.81■■□□□ 1.88
PRKRIP1-203ENST00000468316 ATAD2BQ9ULI0 1458 aa26.65■■□□□ 1.86
PRKRIP1-203ENST00000468316 SMARCA2P51531 1590 aa26.64■■□□□ 1.85
PRKRIP1-203ENST00000468316 CCDC88BA6NC98 1476 aa26.6■■□□□ 1.85
PRKRIP1-203ENST00000468316 EIF4G1Q04637 1599 aaKnown RBP26.59■■□□□ 1.85
PRKRIP1-203ENST00000468316 BAZ1BQ9UIG0 1483 aaKnown RBP26.51■■□□□ 1.83
PRKRIP1-203ENST00000468316 NCAPD3P42695 1498 aa26.39■■□□□ 1.81
PRKRIP1-203ENST00000468316 HMGXB3Q12766 1538 aa26.36■■□□□ 1.81
PRKRIP1-203ENST00000468316 TRIM41Q8WV44 630 aa26.35■■□□□ 1.81
PRKRIP1-203ENST00000468316 CC2D2AQ9P2K1 1620 aa26.14■■□□□ 1.78
PRKRIP1-203ENST00000468316 ABCC8Q09428 1581 aa26.11■■□□□ 1.77
PRKRIP1-203ENST00000468316 LOC105371045A0A1W2PR82 267 aa25.96■■□□□ 1.75
PRKRIP1-203ENST00000468316 WRNQ14191 1432 aaPredicted RBP eCLIP25.91■■□□□ 1.74
PRKRIP1-203ENST00000468316 FAM9AQ8IZU1 332 aaPredicted RBP25.88■■□□□ 1.73
PRKRIP1-203ENST00000468316 CFTRP13569 1480 aa25.86■■□□□ 1.73
PRKRIP1-203ENST00000468316 SYNJ1O43426 1573 aa25.8■■□□□ 1.72
PRKRIP1-203ENST00000468316 PRDM2Q13029 1718 aa25.74■■□□□ 1.71
PRKRIP1-203ENST00000468316 CADPSQ9ULU8 1353 aa25.72■■□□□ 1.71
PRKRIP1-203ENST00000468316 TOP2BQ02880 1626 aa25.67■■□□□ 1.7
PRKRIP1-203ENST00000468316 SOGA1O94964 1423 aa25.67■■□□□ 1.7
PRKRIP1-203ENST00000468316 EEA1Q15075 1411 aa25.66■■□□□ 1.7
PRKRIP1-203ENST00000468316 BIVM-ERCC5R4GMW8 1640 aa25.65■■□□□ 1.7
PRKRIP1-203ENST00000468316 RUSC2Q8N2Y8 1516 aa25.57■■□□□ 1.68
PRKRIP1-203ENST00000468316 CUX1P39880 1505 aa25.56■■□□□ 1.68
PRKRIP1-203ENST00000468316 CSRNP3Q8WYN3 585 aa25.51■■□□□ 1.67
PRKRIP1-203ENST00000468316 EHMT2Q96KQ7 1210 aa25.5■■□□□ 1.67
PRKRIP1-203ENST00000468316 LAMC3Q9Y6N6 1575 aa25.45■■□□□ 1.66
PRKRIP1-203ENST00000468316 FANCD2Q9BXW9 1451 aa25.44■■□□□ 1.66
PRKRIP1-203ENST00000468316 NESP48681 1621 aa25.43■■□□□ 1.66
PRKRIP1-203ENST00000468316 DNAJC5BQ9UF47 199 aa25.43■■□□□ 1.66
PRKRIP1-203ENST00000468316 KIF21BO75037 1637 aa25.31■■□□□ 1.64
PRKRIP1-203ENST00000468316 GOLGA3Q08378 1498 aa25.31■■□□□ 1.64
PRKRIP1-203ENST00000468316 CEP164Q9UPV0 1460 aa25.3■■□□□ 1.64
PRKRIP1-203ENST00000468316 TNIKQ9UKE5 1360 aa25.29■■□□□ 1.64
PRKRIP1-203ENST00000468316 DNMBPQ6XZF7 1577 aa25.25■■□□□ 1.63
PRKRIP1-203ENST00000468316 PDS5BQ9NTI5 1447 aa25.24■■□□□ 1.63
PRKRIP1-203ENST00000468316 FGD5Q6ZNL6 1462 aa25.24■■□□□ 1.63
PRKRIP1-203ENST00000468316 KIF27Q86VH2 1401 aa25.23■■□□□ 1.63
PRKRIP1-203ENST00000468316 TOPBP1Q92547 1522 aa25.19■■□□□ 1.62
PRKRIP1-203ENST00000468316 UBTFP17480 764 aaKnown RBP25.19■■□□□ 1.62
PRKRIP1-203ENST00000468316 CEP162Q5TB80 1403 aa25.17■■□□□ 1.62
PRKRIP1-203ENST00000468316 RAPGEF2Q9Y4G8 1499 aa25.13■■□□□ 1.61
PRKRIP1-203ENST00000468316 PRXQ9BXM0 1461 aa25.13■■□□□ 1.61
PRKRIP1-203ENST00000468316 KIF21AQ7Z4S6 1674 aa25.12■■□□□ 1.61
PRKRIP1-203ENST00000468316 CUX2O14529 1486 aa25.12■■□□□ 1.61
PRKRIP1-203ENST00000468316 URB2Q14146 1524 aaKnown RBP25.12■■□□□ 1.61
PRKRIP1-203ENST00000468316 ERICH3Q5RHP9 1530 aa25.1■■□□□ 1.61
PRKRIP1-203ENST00000468316 POLA1P09884 1462 aaPredicted RBP25.09■■□□□ 1.61
PRKRIP1-203ENST00000468316 ABCA10Q8WWZ4 1543 aa25.03■■□□□ 1.6
PRKRIP1-203ENST00000468316 RAD54L2Q9Y4B4 1467 aa25.01■■□□□ 1.59
PRKRIP1-203ENST00000468316 IGF1RP08069 1367 aa25■■□□□ 1.59
PRKRIP1-203ENST00000468316 PCGF6Q9BYE7 350 aa24.99■■□□□ 1.59
PRKRIP1-203ENST00000468316 TRIM26Q12899 539 aaPredicted RBP24.95■■□□□ 1.58
PRKRIP1-203ENST00000468316 WDR97A6NE52 1622 aa24.92■■□□□ 1.58
PRKRIP1-203ENST00000468316 CLIP1P30622 1438 aa24.92■■□□□ 1.58
PRKRIP1-203ENST00000468316 MRC2Q9UBG0 1479 aa24.9■■□□□ 1.58
PRKRIP1-203ENST00000468316 CARMIL1Q5VZK9 1371 aa24.87■■□□□ 1.57
PRKRIP1-203ENST00000468316 TARBP1Q13395 1621 aaKnown RBP24.8■■□□□ 1.56
PRKRIP1-203ENST00000468316 ABCA5Q8WWZ7 1642 aa24.8■■□□□ 1.56
PRKRIP1-203ENST00000468316 CUL7Q14999 1698 aa24.77■■□□□ 1.56
PRKRIP1-203ENST00000468316 WDR62O43379 1518 aa24.76■■□□□ 1.55
PRKRIP1-203ENST00000468316 TDRD9Q8NDG6 1382 aaKnown RBP24.75■■□□□ 1.55
PRKRIP1-203ENST00000468316 GAPVD1Q14C86 1478 aa24.74■■□□□ 1.55
PRKRIP1-203ENST00000468316 VPS8Q8N3P4 1428 aa24.73■■□□□ 1.55
PRKRIP1-203ENST00000468316 ERCC6Q03468 1493 aa24.73■■□□□ 1.55
PRKRIP1-203ENST00000468316 RANGAP1P46060 587 aaPredicted RBP24.71■■□□□ 1.55
PRKRIP1-203ENST00000468316 PPARGC1BQ86YN6 1023 aaKnown RBP24.71■■□□□ 1.55
PRKRIP1-203ENST00000468316 ARAP1Q96P48 1450 aa24.65■■□□□ 1.54
PRKRIP1-203ENST00000468316 THOC2Q8NI27 1593 aaKnown RBP24.64■■□□□ 1.54
PRKRIP1-203ENST00000468316 IFT140Q96RY7 1462 aa24.63■■□□□ 1.53
PRKRIP1-203ENST00000468316 ARHGAP35Q9NRY4 1499 aa24.61■■□□□ 1.53
PRKRIP1-203ENST00000468316 PBRM1Q86U86 1689 aa24.58■■□□□ 1.53
PRKRIP1-203ENST00000468316 AQRO60306 1485 aaKnown RBP eCLIP24.56■■□□□ 1.521e-9■■■■■ 28.1
PRKRIP1-203ENST00000468316 CTTNBP2Q8WZ74 1663 aa24.54■■□□□ 1.52
PRKRIP1-203ENST00000468316 GRIN2BQ13224 1484 aa24.51■■□□□ 1.51
PRKRIP1-203ENST00000468316 ZNF608Q9ULD9 1512 aaPredicted RBP24.5■■□□□ 1.51
PRKRIP1-203ENST00000468316 APLP2Q06481 763 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms