RNA–Protein interactions for RNA: ENST00000468280.5

PPP2R1A-206, Transcript of protein phosphatase 2 scaffold subunit Aalpha, humanhuman

TSL 2

Gene PPP2R1A, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP2R1A-206ENST00000468280 NISCHQ9Y2I1 1504 aa30.64■■■□□ 2.5
PPP2R1A-206ENST00000468280 CCDC180Q9P1Z9 1646 aa27.23■■□□□ 1.95
PPP2R1A-206ENST00000468280 ABCC9O60706 1549 aa26.37■■□□□ 1.81
PPP2R1A-206ENST00000468280 ZCCHC6Q5VYS8 1495 aaKnown RBP25.59■■□□□ 1.69
PPP2R1A-206ENST00000468280 NACADO15069 1562 aa25.51■■□□□ 1.67
PPP2R1A-206ENST00000468280 RB1CC1Q8TDY2 1594 aa25.51■■□□□ 1.67
PPP2R1A-206ENST00000468280 DCAF8L2P0C7V8 631 aa25.49■■□□□ 1.67
PPP2R1A-206ENST00000468280 MYO15BQ96JP2 1530 aa25.4■■□□□ 1.66
PPP2R1A-206ENST00000468280 DCAF1Q9Y4B6 1507 aa25.37■■□□□ 1.65
PPP2R1A-206ENST00000468280 UNC13AQ9UPW8 1703 aa24.95■■□□□ 1.59
PPP2R1A-206ENST00000468280 SCRIBQ14160 1630 aa24.84■■□□□ 1.57
PPP2R1A-206ENST00000468280 BICRAQ9NZM4 1560 aa24.67■■□□□ 1.54
PPP2R1A-206ENST00000468280 PABPN1Q86U42 306 aaKnown RBP eCLIP24.62■■□□□ 1.53
PPP2R1A-206ENST00000468280 SHROOM4Q9ULL8 1493 aa24.49■■□□□ 1.51
PPP2R1A-206ENST00000468280 EIF4G1Q04637 1599 aaKnown RBP24.03■■□□□ 1.44
PPP2R1A-206ENST00000468280 DNAJC5BQ9UF47 199 aa23.91■■□□□ 1.42
PPP2R1A-206ENST00000468280 CC2D2AQ9P2K1 1620 aa23.89■■□□□ 1.42
PPP2R1A-206ENST00000468280 CECR2Q9BXF3 1484 aa23.81■■□□□ 1.4
PPP2R1A-206ENST00000468280 BAZ1AQ9NRL2 1556 aaPredicted RBP23.77■■□□□ 1.4
PPP2R1A-206ENST00000468280 SMARCA4P51532 1647 aa23.77■■□□□ 1.4
PPP2R1A-206ENST00000468280 MROH2BQ7Z745 1585 aa23.61■■□□□ 1.37
PPP2R1A-206ENST00000468280 SMARCA2P51531 1590 aa23.58■■□□□ 1.37
PPP2R1A-206ENST00000468280 ATAD2BQ9ULI0 1458 aa23.54■■□□□ 1.36
PPP2R1A-206ENST00000468280 PEG3Q9GZU2 1588 aa23.52■■□□□ 1.36
PPP2R1A-206ENST00000468280 NCAPD3P42695 1498 aa23.49■■□□□ 1.35
PPP2R1A-206ENST00000468280 HMGXB3Q12766 1538 aa23.45■■□□□ 1.34
PPP2R1A-206ENST00000468280 BAZ1BQ9UIG0 1483 aaKnown RBP23.4■■□□□ 1.34
PPP2R1A-206ENST00000468280 WIZO95785 1651 aa23.4■■□□□ 1.34
PPP2R1A-206ENST00000468280 RSF1Q96T23 1441 aaPredicted RBP23.39■■□□□ 1.33
PPP2R1A-206ENST00000468280 TOP2AP11388 1531 aaKnown RBP23.18■■□□□ 1.3
PPP2R1A-206ENST00000468280 SUPT5HO00267 1087 aaKnown RBP22.95■■□□□ 1.26
PPP2R1A-206ENST00000468280 LAMC3Q9Y6N6 1575 aa22.9■■□□□ 1.26
PPP2R1A-206ENST00000468280 NESP48681 1621 aa22.86■■□□□ 1.25
PPP2R1A-206ENST00000468280 CCDC88BA6NC98 1476 aa22.85■■□□□ 1.25
PPP2R1A-206ENST00000468280 CADPSQ9ULU8 1353 aa22.81■■□□□ 1.24
PPP2R1A-206ENST00000468280 ERCC6Q03468 1493 aa22.76■■□□□ 1.23
PPP2R1A-206ENST00000468280 CFTRP13569 1480 aa22.73■■□□□ 1.23
PPP2R1A-206ENST00000468280 PDS5BQ9NTI5 1447 aa22.71■■□□□ 1.23
PPP2R1A-206ENST00000468280 PRDM2Q13029 1718 aa22.71■■□□□ 1.23
PPP2R1A-206ENST00000468280 KIF21AQ7Z4S6 1674 aa22.68■■□□□ 1.22
PPP2R1A-206ENST00000468280 FANCD2Q9BXW9 1451 aa22.58■■□□□ 1.2
PPP2R1A-206ENST00000468280 CEP164Q9UPV0 1460 aa22.56■■□□□ 1.2
PPP2R1A-206ENST00000468280 THOC2Q8NI27 1593 aaKnown RBP22.54■■□□□ 1.2
PPP2R1A-206ENST00000468280 MRC2Q9UBG0 1479 aa22.47■■□□□ 1.19
PPP2R1A-206ENST00000468280 CUX2O14529 1486 aa22.42■■□□□ 1.18
PPP2R1A-206ENST00000468280 WDR62O43379 1518 aa22.4■■□□□ 1.18
PPP2R1A-206ENST00000468280 URB2Q14146 1524 aaKnown RBP22.33■■□□□ 1.17
PPP2R1A-206ENST00000468280 ABCC8Q09428 1581 aa22.28■■□□□ 1.16
PPP2R1A-206ENST00000468280 DNMBPQ6XZF7 1577 aa22.27■■□□□ 1.16
PPP2R1A-206ENST00000468280 TOPBP1Q92547 1522 aa22.25■■□□□ 1.15
PPP2R1A-206ENST00000468280 CUX1P39880 1505 aa22.15■■□□□ 1.14
PPP2R1A-206ENST00000468280 WRNQ14191 1432 aaPredicted RBP eCLIP22.08■■□□□ 1.13
PPP2R1A-206ENST00000468280 POLA1P09884 1462 aaPredicted RBP22.07■■□□□ 1.12
PPP2R1A-206ENST00000468280 IFT140Q96RY7 1462 aa22.06■■□□□ 1.12
PPP2R1A-206ENST00000468280 BIVM-ERCC5R4GMW8 1640 aa22.06■■□□□ 1.12
PPP2R1A-206ENST00000468280 FGD5Q6ZNL6 1462 aa22.05■■□□□ 1.12
PPP2R1A-206ENST00000468280 TOP2BQ02880 1626 aa22.04■■□□□ 1.12
PPP2R1A-206ENST00000468280 SYNJ1O43426 1573 aa22.04■■□□□ 1.12
PPP2R1A-206ENST00000468280 TARBP1Q13395 1621 aaKnown RBP21.99■■□□□ 1.11
PPP2R1A-206ENST00000468280 SOGA1O94964 1423 aa21.96■■□□□ 1.11
PPP2R1A-206ENST00000468280 RAD54L2Q9Y4B4 1467 aa21.95■■□□□ 1.1
PPP2R1A-206ENST00000468280 WDR97A6NE52 1622 aa21.91■■□□□ 1.1
PPP2R1A-206ENST00000468280 EIF4G3O43432 1585 aaKnown RBP21.91■■□□□ 1.1
PPP2R1A-206ENST00000468280 ZNF608Q9ULD9 1512 aaPredicted RBP21.91■■□□□ 1.1
PPP2R1A-206ENST00000468280 ABCA10Q8WWZ4 1543 aa21.85■■□□□ 1.09
PPP2R1A-206ENST00000468280 AQRO60306 1485 aaKnown RBP eCLIP21.81■■□□□ 1.083e-6■■■■□ 21.4
PPP2R1A-206ENST00000468280 TDRD9Q8NDG6 1382 aaKnown RBP21.79■■□□□ 1.08
PPP2R1A-206ENST00000468280 ABCA5Q8WWZ7 1642 aa21.77■■□□□ 1.07
PPP2R1A-206ENST00000468280 PBRM1Q86U86 1689 aa21.75■■□□□ 1.07
PPP2R1A-206ENST00000468280 GAPVD1Q14C86 1478 aa21.73■■□□□ 1.07
PPP2R1A-206ENST00000468280 GRIN2BQ13224 1484 aa21.71■■□□□ 1.07
PPP2R1A-206ENST00000468280 TRIM41Q8WV44 630 aa21.68■■□□□ 1.06
PPP2R1A-206ENST00000468280 SNAPC4Q5SXM2 1469 aa21.65■■□□□ 1.06
PPP2R1A-206ENST00000468280 MAGI1Q96QZ7 1491 aaPredicted RBP21.64■■□□□ 1.06
PPP2R1A-206ENST00000468280 KIF27Q86VH2 1401 aa21.62■■□□□ 1.05
PPP2R1A-206ENST00000468280 CHD1O14646 1710 aa21.61■■□□□ 1.05
PPP2R1A-206ENST00000468280 ERICH3Q5RHP9 1530 aa21.6■■□□□ 1.05
PPP2R1A-206ENST00000468280 ADAMTS12P58397 1594 aa21.56■■□□□ 1.04
PPP2R1A-206ENST00000468280 SYNJ2O15056 1496 aa21.54■■□□□ 1.04
PPP2R1A-206ENST00000468280 FBLN2P98095 1184 aa21.52■■□□□ 1.04
PPP2R1A-206ENST00000468280 CHIC1Q5VXU3 224 aa21.51■■□□□ 1.03
PPP2R1A-206ENST00000468280 CUL7Q14999 1698 aa21.5■■□□□ 1.03
PPP2R1A-206ENST00000468280 CHMP7Q8WUX9 453 aaPredicted RBP21.49■■□□□ 1.03
PPP2R1A-206ENST00000468280 FHAD1B1AJZ9 1412 aa21.48■■□□□ 1.03
PPP2R1A-206ENST00000468280 OSCARQ8IYS5 282 aa21.48■■□□□ 1.03
PPP2R1A-206ENST00000468280 IGF1RP08069 1367 aa21.44■■□□□ 1.02
PPP2R1A-206ENST00000468280 GRIN2AQ12879 1464 aa21.43■■□□□ 1.02
PPP2R1A-206ENST00000468280 RUSC2Q8N2Y8 1516 aa21.43■■□□□ 1.02
PPP2R1A-206ENST00000468280 DNAJC5Q9H3Z4 198 aa21.41■■□□□ 1.02
PPP2R1A-206ENST00000468280 EEA1Q15075 1411 aa21.35■■□□□ 1.01
PPP2R1A-206ENST00000468280 CARMIL1Q5VZK9 1371 aa21.35■■□□□ 1.01
PPP2R1A-206ENST00000468280 CLASP1Q7Z460 1538 aa21.33■■□□□ 1
PPP2R1A-206ENST00000468280 CEP170Q5SW79 1584 aa21.32■■□□□ 1
PPP2R1A-206ENST00000468280 NUP160Q12769 1436 aa21.3■■□□□ 1
PPP2R1A-206ENST00000468280 RAPGEF2Q9Y4G8 1499 aa21.27■■□□□ 1
PPP2R1A-206ENST00000468280 CSRNP3Q8WYN3 585 aa21.23■□□□□ 0.99
PPP2R1A-206ENST00000468280 PRXQ9BXM0 1461 aa21.22■□□□□ 0.99
PPP2R1A-206ENST00000468280 FAM9AQ8IZU1 332 aaPredicted RBP21.21■□□□□ 0.99
PPP2R1A-206ENST00000468280 ARHGEF11O15085 1522 aa21.18■□□□□ 0.98
PPP2R1A-206ENST00000468280 RIMBP3CA6NJZ7 1639 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms