RNA–Protein interactions for RNA: ENST00000467915.1

SGSM3-206, Transcript of small G protein signaling modulator 3, humanhuman

TSL 3

Gene SGSM3, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM3-206ENST00000467915 NISCHQ9Y2I1 1504 aa39.48■■■■□ 3.91
SGSM3-206ENST00000467915 ABCC9O60706 1549 aa35.42■■■■□ 3.26
SGSM3-206ENST00000467915 CCDC180Q9P1Z9 1646 aa35.26■■■■□ 3.24
SGSM3-206ENST00000467915 RB1CC1Q8TDY2 1594 aa33.6■■■□□ 2.97
SGSM3-206ENST00000467915 DCAF8L2P0C7V8 631 aa33.42■■■□□ 2.94
SGSM3-206ENST00000467915 NACADO15069 1562 aa33.38■■■□□ 2.93
SGSM3-206ENST00000467915 DNAJC5BQ9UF47 199 aa33.31■■■□□ 2.92
SGSM3-206ENST00000467915 PABPN1Q86U42 306 aaKnown RBP eCLIP33.07■■■□□ 2.88
SGSM3-206ENST00000467915 MYO15BQ96JP2 1530 aa32.92■■■□□ 2.86
SGSM3-206ENST00000467915 UNC13AQ9UPW8 1703 aa32.82■■■□□ 2.85
SGSM3-206ENST00000467915 ZCCHC6Q5VYS8 1495 aaKnown RBP32.72■■■□□ 2.83
SGSM3-206ENST00000467915 BICRAQ9NZM4 1560 aa32.71■■■□□ 2.83
SGSM3-206ENST00000467915 DCAF1Q9Y4B6 1507 aa32.54■■■□□ 2.8
SGSM3-206ENST00000467915 SCRIBQ14160 1630 aa32.27■■■□□ 2.76
SGSM3-206ENST00000467915 SHROOM4Q9ULL8 1493 aa32.12■■■□□ 2.73
SGSM3-206ENST00000467915 CC2D2AQ9P2K1 1620 aa31.93■■■□□ 2.7
SGSM3-206ENST00000467915 EIF4G1Q04637 1599 aaKnown RBP31.86■■■□□ 2.69
SGSM3-206ENST00000467915 CECR2Q9BXF3 1484 aa31.85■■■□□ 2.69
SGSM3-206ENST00000467915 NCAPD3P42695 1498 aa30.89■■■□□ 2.54
SGSM3-206ENST00000467915 ATAD2BQ9ULI0 1458 aa30.82■■■□□ 2.53
SGSM3-206ENST00000467915 SMARCA4P51532 1647 aa30.75■■■□□ 2.51
SGSM3-206ENST00000467915 SMARCA2P51531 1590 aa30.66■■■□□ 2.5
SGSM3-206ENST00000467915 HMGXB3Q12766 1538 aa30.6■■■□□ 2.49
SGSM3-206ENST00000467915 BAZ1AQ9NRL2 1556 aaPredicted RBP30.58■■■□□ 2.49
SGSM3-206ENST00000467915 ERCC6Q03468 1493 aa30.5■■■□□ 2.47
SGSM3-206ENST00000467915 BAZ1BQ9UIG0 1483 aaKnown RBP30.49■■■□□ 2.47
SGSM3-206ENST00000467915 MROH2BQ7Z745 1585 aa30.47■■■□□ 2.47
SGSM3-206ENST00000467915 NESP48681 1621 aa30.46■■■□□ 2.47
SGSM3-206ENST00000467915 DNAJC5Q9H3Z4 198 aa30.44■■■□□ 2.46
SGSM3-206ENST00000467915 PEG3Q9GZU2 1588 aa30.43■■■□□ 2.46
SGSM3-206ENST00000467915 CUX2O14529 1486 aa30.39■■■□□ 2.46
SGSM3-206ENST00000467915 LAMC3Q9Y6N6 1575 aa30.11■■■□□ 2.41
SGSM3-206ENST00000467915 WIZO95785 1651 aa30.07■■■□□ 2.4
SGSM3-206ENST00000467915 THOC2Q8NI27 1593 aaKnown RBP30.03■■■□□ 2.4
SGSM3-206ENST00000467915 PDS5BQ9NTI5 1447 aa29.98■■■□□ 2.39
SGSM3-206ENST00000467915 CADPSQ9ULU8 1353 aa29.98■■■□□ 2.39
SGSM3-206ENST00000467915 KIF21AQ7Z4S6 1674 aa29.95■■■□□ 2.38
SGSM3-206ENST00000467915 RSF1Q96T23 1441 aaPredicted RBP29.87■■■□□ 2.37
SGSM3-206ENST00000467915 MRC2Q9UBG0 1479 aa29.73■■■□□ 2.35
SGSM3-206ENST00000467915 TOP2AP11388 1531 aaKnown RBP29.66■■■□□ 2.34
SGSM3-206ENST00000467915 WDR62O43379 1518 aa29.64■■■□□ 2.34
SGSM3-206ENST00000467915 CFTRP13569 1480 aa29.62■■■□□ 2.33
SGSM3-206ENST00000467915 FANCD2Q9BXW9 1451 aa29.62■■■□□ 2.33
SGSM3-206ENST00000467915 CEP164Q9UPV0 1460 aa29.61■■■□□ 2.33
SGSM3-206ENST00000467915 URB2Q14146 1524 aaKnown RBP29.4■■■□□ 2.3
SGSM3-206ENST00000467915 CCDC88BA6NC98 1476 aa29.4■■■□□ 2.3
SGSM3-206ENST00000467915 PRDM2Q13029 1718 aa29.15■■■□□ 2.26
SGSM3-206ENST00000467915 TRIM41Q8WV44 630 aa29.15■■■□□ 2.26
SGSM3-206ENST00000467915 OSCARQ8IYS5 282 aa29.1■■■□□ 2.25
SGSM3-206ENST00000467915 TOPBP1Q92547 1522 aa29.07■■■□□ 2.24
SGSM3-206ENST00000467915 ZNF608Q9ULD9 1512 aaPredicted RBP29.06■■■□□ 2.24
SGSM3-206ENST00000467915 IFT140Q96RY7 1462 aa29.02■■■□□ 2.24
SGSM3-206ENST00000467915 ABCC8Q09428 1581 aa28.92■■■□□ 2.22
SGSM3-206ENST00000467915 DNMBPQ6XZF7 1577 aa28.91■■■□□ 2.22
SGSM3-206ENST00000467915 AQRO60306 1485 aaKnown RBP eCLIP28.81■■■□□ 2.2
SGSM3-206ENST00000467915 EIF4G3O43432 1585 aaKnown RBP28.79■■■□□ 2.2
SGSM3-206ENST00000467915 TARBP1Q13395 1621 aaKnown RBP28.78■■■□□ 2.2
SGSM3-206ENST00000467915 POLA1P09884 1462 aaPredicted RBP28.78■■■□□ 2.2
SGSM3-206ENST00000467915 RAD54L2Q9Y4B4 1467 aa28.74■■■□□ 2.19
SGSM3-206ENST00000467915 SOGA1O94964 1423 aa28.68■■■□□ 2.18
SGSM3-206ENST00000467915 RIMBP3CA6NJZ7 1639 aa28.66■■■□□ 2.18
SGSM3-206ENST00000467915 RIMBP3BA6NNM3 1639 aa28.66■■■□□ 2.18
SGSM3-206ENST00000467915 RIMBP3Q9UFD9 1639 aa28.66■■■□□ 2.18
SGSM3-206ENST00000467915 SUPT5HO00267 1087 aaKnown RBP28.66■■■□□ 2.18
SGSM3-206ENST00000467915 TDRD9Q8NDG6 1382 aaKnown RBP28.65■■■□□ 2.18
SGSM3-206ENST00000467915 FBLN2P98095 1184 aa28.62■■■□□ 2.17
SGSM3-206ENST00000467915 FGD5Q6ZNL6 1462 aa28.61■■■□□ 2.17
SGSM3-206ENST00000467915 CUX1P39880 1505 aa28.61■■■□□ 2.17
SGSM3-206ENST00000467915 ARHGEF11O15085 1522 aa28.6■■■□□ 2.17
SGSM3-206ENST00000467915 CHD1O14646 1710 aa28.55■■■□□ 2.16
SGSM3-206ENST00000467915 CYB5RLQ6IPT4 315 aa28.47■■■□□ 2.15
SGSM3-206ENST00000467915 SNAPC4Q5SXM2 1469 aa28.46■■■□□ 2.15
SGSM3-206ENST00000467915 CHMP7Q8WUX9 453 aaPredicted RBP28.38■■■□□ 2.13
SGSM3-206ENST00000467915 GRIN2BQ13224 1484 aa28.37■■■□□ 2.13
SGSM3-206ENST00000467915 WDR97A6NE52 1622 aa28.36■■■□□ 2.13
SGSM3-206ENST00000467915 ARAP1Q96P48 1450 aa28.35■■■□□ 2.13
SGSM3-206ENST00000467915 MAGI1Q96QZ7 1491 aaPredicted RBP28.34■■■□□ 2.13
SGSM3-206ENST00000467915 GAPVD1Q14C86 1478 aa28.29■■■□□ 2.12
SGSM3-206ENST00000467915 CLASP1Q7Z460 1538 aa28.28■■■□□ 2.12
SGSM3-206ENST00000467915 ABCA10Q8WWZ4 1543 aa28.27■■■□□ 2.12
SGSM3-206ENST00000467915 SYNJ2O15056 1496 aa28.27■■■□□ 2.12
SGSM3-206ENST00000467915 SYNJ1O43426 1573 aa28.2■■■□□ 2.11
SGSM3-206ENST00000467915 PBRM1Q86U86 1689 aa28.19■■■□□ 2.1
SGSM3-206ENST00000467915 ABCA5Q8WWZ7 1642 aa28.18■■■□□ 2.1
SGSM3-206ENST00000467915 WRNQ14191 1432 aaPredicted RBP eCLIP28.17■■■□□ 2.1
SGSM3-206ENST00000467915 TRHP20396 242 aaPredicted RBP28.11■■■□□ 2.09
SGSM3-206ENST00000467915 TOP2BQ02880 1626 aa28.1■■■□□ 2.09
SGSM3-206ENST00000467915 BIVM-ERCC5R4GMW8 1640 aa28.07■■■□□ 2.08
SGSM3-206ENST00000467915 GRIN2AQ12879 1464 aa28.02■■■□□ 2.08
SGSM3-206ENST00000467915 ADAMTS12P58397 1594 aa27.98■■■□□ 2.07
SGSM3-206ENST00000467915 CEP170Q5SW79 1584 aa27.93■■■□□ 2.06
SGSM3-206ENST00000467915 ERCC6L2Q5T890 1561 aa27.93■■■□□ 2.06
SGSM3-206ENST00000467915 FHAD1B1AJZ9 1412 aa27.92■■■□□ 2.06
SGSM3-206ENST00000467915 NUP160Q12769 1436 aa27.92■■■□□ 2.06
SGSM3-206ENST00000467915 ERICH3Q5RHP9 1530 aa27.87■■■□□ 2.05
SGSM3-206ENST00000467915 SHROOM2Q13796 1616 aa27.74■■■□□ 2.03
SGSM3-206ENST00000467915 JPH4Q96JJ6 628 aa27.7■■■□□ 2.02
SGSM3-206ENST00000467915 PRG4Q92954 1404 aaPredicted RBP27.68■■■□□ 2.02
SGSM3-206ENST00000467915 IGF1RP08069 1367 aa27.65■■■□□ 2.02
SGSM3-206ENST00000467915 KIF27Q86VH2 1401 aa27.58■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms