RNA–Protein interactions for RNA: ENST00000467728.5

NR1H3-217, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NR1H3, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-217ENST00000467728 NISCHQ9Y2I1 1504 aa24.31■■□□□ 1.48
NR1H3-217ENST00000467728 HRCP23327 699 aa21.99■■□□□ 1.11
NR1H3-217ENST00000467728 PPARGC1BQ86YN6 1023 aaKnown RBP21.67■■□□□ 1.06
NR1H3-217ENST00000467728 SHROOM4Q9ULL8 1493 aa21.64■■□□□ 1.06
NR1H3-217ENST00000467728 SUPT5HO00267 1087 aaKnown RBP21.62■■□□□ 1.05
NR1H3-217ENST00000467728 PCGF6Q9BYE7 350 aa21.59■■□□□ 1.05
NR1H3-217ENST00000467728 MYO15BQ96JP2 1530 aa21.37■■□□□ 1.01
NR1H3-217ENST00000467728 CHIC1Q5VXU3 224 aa21.22■□□□□ 0.99
NR1H3-217ENST00000467728 PELP1Q8IZL8 1130 aaKnown RBP21.22■□□□□ 0.99
NR1H3-217ENST00000467728 CCDC180Q9P1Z9 1646 aa21.05■□□□□ 0.96
NR1H3-217ENST00000467728 SCAF1Q9H7N4 1312 aaKnown RBP20.92■□□□□ 0.94
NR1H3-217ENST00000467728 LOC105371045A0A1W2PR82 267 aa20.85■□□□□ 0.93
NR1H3-217ENST00000467728 DCAF1Q9Y4B6 1507 aa20.81■□□□□ 0.92
NR1H3-217ENST00000467728 TRIM26Q12899 539 aaPredicted RBP20.76■□□□□ 0.91
NR1H3-217ENST00000467728 ZEB1P37275 1124 aaPredicted RBP20.55■□□□□ 0.88
NR1H3-217ENST00000467728 ZCCHC6Q5VYS8 1495 aaKnown RBP20.46■□□□□ 0.87
NR1H3-217ENST00000467728 MYT1Q01538 1121 aa20.36■□□□□ 0.85
NR1H3-217ENST00000467728 NEUROD1Q13562 356 aa20.33■□□□□ 0.84
NR1H3-217ENST00000467728 ACIN1Q9UKV3 1341 aaKnown RBP20.32■□□□□ 0.84
NR1H3-217ENST00000467728 DCAF8L2P0C7V8 631 aa20.32■□□□□ 0.84
NR1H3-217ENST00000467728 GTF3C3Q9Y5Q9 886 aa20.22■□□□□ 0.83
NR1H3-217ENST00000467728 EHMT2Q96KQ7 1210 aa20.04■□□□□ 0.8
NR1H3-217ENST00000467728 FAM9AQ8IZU1 332 aaPredicted RBP20.03■□□□□ 0.8
NR1H3-217ENST00000467728 ABCC9O60706 1549 aa20.01■□□□□ 0.79
NR1H3-217ENST00000467728 CENPBP07199 599 aaPredicted RBP20.01■□□□□ 0.79
NR1H3-217ENST00000467728 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.99■□□□□ 0.79
NR1H3-217ENST00000467728 DIEXFQ68CQ4 756 aaKnown RBP19.96■□□□□ 0.79
NR1H3-217ENST00000467728 TRIM41Q8WV44 630 aa19.9■□□□□ 0.78
NR1H3-217ENST00000467728 CCER1Q8TC90 406 aaPredicted RBP19.9■□□□□ 0.78
NR1H3-217ENST00000467728 YTHDC1Q96MU7 727 aaKnown RBP19.74■□□□□ 0.75
NR1H3-217ENST00000467728 NACADO15069 1562 aa19.62■□□□□ 0.73
NR1H3-217ENST00000467728 TTBK1Q5TCY1 1321 aaPredicted RBP19.55■□□□□ 0.72
NR1H3-217ENST00000467728 SCRIBQ14160 1630 aa19.51■□□□□ 0.71
NR1H3-217ENST00000467728 ZNF316A6NFI3 1004 aaPredicted RBP19.51■□□□□ 0.71
NR1H3-217ENST00000467728 RSF1Q96T23 1441 aaPredicted RBP19.48■□□□□ 0.71
NR1H3-217ENST00000467728 MIER1Q8N108 512 aa19.47■□□□□ 0.71
NR1H3-217ENST00000467728 RB1CC1Q8TDY2 1594 aa19.43■□□□□ 0.7
NR1H3-217ENST00000467728 BCL11AQ9H165 835 aa19.24■□□□□ 0.67
NR1H3-217ENST00000467728 ANP32EQ9BTT0 268 aa19.19■□□□□ 0.66
NR1H3-217ENST00000467728 SUPT16HQ9Y5B9 1047 aaKnown RBP19.19■□□□□ 0.66
NR1H3-217ENST00000467728 TSHZ2Q9NRE2 1034 aa19.14■□□□□ 0.65
NR1H3-217ENST00000467728 UNC13AQ9UPW8 1703 aa19.13■□□□□ 0.65
NR1H3-217ENST00000467728 WRNQ14191 1432 aaPredicted RBP eCLIP19.08■□□□□ 0.64
NR1H3-217ENST00000467728 HNRNPUL2Q1KMD3 747 aaKnown RBP19.07■□□□□ 0.64
NR1H3-217ENST00000467728 CSRNP3Q8WYN3 585 aa19.05■□□□□ 0.64
NR1H3-217ENST00000467728 CEP162Q5TB80 1403 aa19.03■□□□□ 0.64
NR1H3-217ENST00000467728 CECR2Q9BXF3 1484 aa18.98■□□□□ 0.63
NR1H3-217ENST00000467728 PABPN1Q86U42 306 aaKnown RBP eCLIP18.95■□□□□ 0.62
NR1H3-217ENST00000467728 BICRAQ9NZM4 1560 aa18.95■□□□□ 0.62
NR1H3-217ENST00000467728 CLSPNQ9HAW4 1339 aa18.95■□□□□ 0.62
NR1H3-217ENST00000467728 UBTFP17480 764 aaKnown RBP18.9■□□□□ 0.62
NR1H3-217ENST00000467728 MROH2BQ7Z745 1585 aa18.87■□□□□ 0.61
NR1H3-217ENST00000467728 BCANQ96GW7 911 aa18.86■□□□□ 0.61
NR1H3-217ENST00000467728 TNIKQ9UKE5 1360 aa18.86■□□□□ 0.61
NR1H3-217ENST00000467728 CCDC88BA6NC98 1476 aa18.84■□□□□ 0.61
NR1H3-217ENST00000467728 SOGA1O94964 1423 aa18.82■□□□□ 0.6
NR1H3-217ENST00000467728 WIZO95785 1651 aa18.81■□□□□ 0.6
NR1H3-217ENST00000467728 ABCC8Q09428 1581 aa18.79■□□□□ 0.6
NR1H3-217ENST00000467728 KCNH8Q96L42 1107 aa18.75■□□□□ 0.59
NR1H3-217ENST00000467728 BAZ1AQ9NRL2 1556 aaPredicted RBP18.71■□□□□ 0.59
NR1H3-217ENST00000467728 EIF4G1Q04637 1599 aaKnown RBP18.71■□□□□ 0.59
NR1H3-217ENST00000467728 RUSC2Q8N2Y8 1516 aa18.71■□□□□ 0.59
NR1H3-217ENST00000467728 FKBP8Q14318 412 aa18.7■□□□□ 0.58
NR1H3-217ENST00000467728 RBM19Q9Y4C8 960 aaKnown RBP18.69■□□□□ 0.58
NR1H3-217ENST00000467728 SMARCA4P51532 1647 aa18.66■□□□□ 0.58
NR1H3-217ENST00000467728 ITGAEP38570 1179 aa18.58■□□□□ 0.56
NR1H3-217ENST00000467728 DHX57Q6P158 1386 aaKnown RBP18.58■□□□□ 0.56
NR1H3-217ENST00000467728 APLP2Q06481 763 aa18.58■□□□□ 0.56
NR1H3-217ENST00000467728 GOLGA3Q08378 1498 aa18.57■□□□□ 0.56
NR1H3-217ENST00000467728 RANGAP1P46060 587 aaPredicted RBP18.57■□□□□ 0.56
NR1H3-217ENST00000467728 MSH5O43196 834 aa18.55■□□□□ 0.56
NR1H3-217ENST00000467728 EEA1Q15075 1411 aa18.52■□□□□ 0.55
NR1H3-217ENST00000467728 CLIP1P30622 1438 aa18.5■□□□□ 0.55
NR1H3-217ENST00000467728 PRKCSHP14314 528 aaPredicted RBP18.46■□□□□ 0.55
NR1H3-217ENST00000467728 NEFLP07196 543 aa18.45■□□□□ 0.54
NR1H3-217ENST00000467728 VPS8Q8N3P4 1428 aa18.45■□□□□ 0.54
NR1H3-217ENST00000467728 TOP2AP11388 1531 aaKnown RBP18.42■□□□□ 0.54
NR1H3-217ENST00000467728 TRIM52Q96A61 297 aa18.41■□□□□ 0.54
NR1H3-217ENST00000467728 DDX10Q13206 875 aaKnown RBP18.4■□□□□ 0.54
NR1H3-217ENST00000467728 PEG3Q9GZU2 1588 aa18.39■□□□□ 0.53
NR1H3-217ENST00000467728 ATAD2BQ9ULI0 1458 aa18.36■□□□□ 0.53
NR1H3-217ENST00000467728 CEP164Q9UPV0 1460 aa18.36■□□□□ 0.53
NR1H3-217ENST00000467728 SMARCA2P51531 1590 aa18.34■□□□□ 0.53
NR1H3-217ENST00000467728 ERICH6Q7L0X2 663 aa18.34■□□□□ 0.53
NR1H3-217ENST00000467728 KANK4Q5T7N3 995 aaPredicted RBP18.31■□□□□ 0.52
NR1H3-217ENST00000467728 FANCIQ9NVI1 1328 aa18.27■□□□□ 0.51
NR1H3-217ENST00000467728 KIF21BO75037 1637 aa18.26■□□□□ 0.51
NR1H3-217ENST00000467728 HIRIP3Q9BW71 556 aaPredicted RBP18.26■□□□□ 0.51
NR1H3-217ENST00000467728 RAPGEF2Q9Y4G8 1499 aa18.25■□□□□ 0.51
NR1H3-217ENST00000467728 IRX6P78412 446 aaPredicted RBP18.24■□□□□ 0.51
NR1H3-217ENST00000467728 BAZ1BQ9UIG0 1483 aaKnown RBP18.23■□□□□ 0.51
NR1H3-217ENST00000467728 DEKP35659 375 aaKnown RBP18.22■□□□□ 0.51
NR1H3-217ENST00000467728 PPP1R15AO75807 674 aaPredicted RBP18.21■□□□□ 0.5
NR1H3-217ENST00000467728 CDK11AQ9UQ88 783 aaPredicted RBP18.21■□□□□ 0.5
NR1H3-217ENST00000467728 SIN3AQ96ST3 1273 aa18.16■□□□□ 0.5
NR1H3-217ENST00000467728 NCAPD3P42695 1498 aa18.16■□□□□ 0.5
NR1H3-217ENST00000467728 ANP32CO43423 234 aa18.15■□□□□ 0.5
NR1H3-217ENST00000467728 CCER2I3L3R5 266 aa18.13■□□□□ 0.49
NR1H3-217ENST00000467728 SYNJ1O43426 1573 aa18.12■□□□□ 0.49
NR1H3-217ENST00000467728 DNAJC5BQ9UF47 199 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms