RNA–Protein interactions for RNA: ENST00000467308.1

TSSC4-208, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

TSL 3

Gene TSSC4, Length 409 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-208ENST00000467308 NISCHQ9Y2I1 1504 aa39.71■■■■□ 3.95
TSSC4-208ENST00000467308 ABCC9O60706 1549 aa35.93■■■■□ 3.34
TSSC4-208ENST00000467308 CCDC180Q9P1Z9 1646 aa35.79■■■■□ 3.32
TSSC4-208ENST00000467308 RB1CC1Q8TDY2 1594 aa34.16■■■■□ 3.06
TSSC4-208ENST00000467308 DNAJC5BQ9UF47 199 aa33.92■■■■□ 3.02
TSSC4-208ENST00000467308 NACADO15069 1562 aa33.89■■■■□ 3.02
TSSC4-208ENST00000467308 DCAF8L2P0C7V8 631 aa33.53■■■□□ 2.96
TSSC4-208ENST00000467308 PABPN1Q86U42 306 aaKnown RBP eCLIP33.39■■■□□ 2.94
TSSC4-208ENST00000467308 UNC13AQ9UPW8 1703 aa33.38■■■□□ 2.93
TSSC4-208ENST00000467308 MYO15BQ96JP2 1530 aa33.38■■■□□ 2.93
TSSC4-208ENST00000467308 BICRAQ9NZM4 1560 aa33.16■■■□□ 2.9
TSSC4-208ENST00000467308 ZCCHC6Q5VYS8 1495 aaKnown RBP32.86■■■□□ 2.85
TSSC4-208ENST00000467308 DCAF1Q9Y4B6 1507 aa32.85■■■□□ 2.85
TSSC4-208ENST00000467308 SHROOM4Q9ULL8 1493 aa32.77■■■□□ 2.84
TSSC4-208ENST00000467308 SCRIBQ14160 1630 aa32.51■■■□□ 2.8
TSSC4-208ENST00000467308 CC2D2AQ9P2K1 1620 aa32.48■■■□□ 2.79
TSSC4-208ENST00000467308 CECR2Q9BXF3 1484 aa32.43■■■□□ 2.78
TSSC4-208ENST00000467308 EIF4G1Q04637 1599 aaKnown RBP32.36■■■□□ 2.77
TSSC4-208ENST00000467308 DNAJC5Q9H3Z4 198 aa31.38■■■□□ 2.61
TSSC4-208ENST00000467308 NCAPD3P42695 1498 aa31.28■■■□□ 2.6
TSSC4-208ENST00000467308 CUX2O14529 1486 aa31.14■■■□□ 2.58
TSSC4-208ENST00000467308 ATAD2BQ9ULI0 1458 aa31.13■■■□□ 2.57
TSSC4-208ENST00000467308 ERCC6Q03468 1493 aa31.07■■■□□ 2.56
TSSC4-208ENST00000467308 SMARCA2P51531 1590 aa31.05■■■□□ 2.56
TSSC4-208ENST00000467308 SMARCA4P51532 1647 aa31.03■■■□□ 2.56
TSSC4-208ENST00000467308 HMGXB3Q12766 1538 aa31.03■■■□□ 2.56
TSSC4-208ENST00000467308 BAZ1AQ9NRL2 1556 aaPredicted RBP30.86■■■□□ 2.53
TSSC4-208ENST00000467308 BAZ1BQ9UIG0 1483 aaKnown RBP30.8■■■□□ 2.52
TSSC4-208ENST00000467308 NESP48681 1621 aa30.8■■■□□ 2.52
TSSC4-208ENST00000467308 PEG3Q9GZU2 1588 aa30.78■■■□□ 2.52
TSSC4-208ENST00000467308 LAMC3Q9Y6N6 1575 aa30.62■■■□□ 2.49
TSSC4-208ENST00000467308 THOC2Q8NI27 1593 aaKnown RBP30.58■■■□□ 2.49
TSSC4-208ENST00000467308 MROH2BQ7Z745 1585 aa30.57■■■□□ 2.48
TSSC4-208ENST00000467308 PDS5BQ9NTI5 1447 aa30.44■■■□□ 2.46
TSSC4-208ENST00000467308 KIF21AQ7Z4S6 1674 aa30.42■■■□□ 2.46
TSSC4-208ENST00000467308 CADPSQ9ULU8 1353 aa30.29■■■□□ 2.44
TSSC4-208ENST00000467308 WIZO95785 1651 aa30.19■■■□□ 2.42
TSSC4-208ENST00000467308 MRC2Q9UBG0 1479 aa30.18■■■□□ 2.42
TSSC4-208ENST00000467308 WDR62O43379 1518 aa30.12■■■□□ 2.41
TSSC4-208ENST00000467308 CEP164Q9UPV0 1460 aa30■■■□□ 2.39
TSSC4-208ENST00000467308 FANCD2Q9BXW9 1451 aa29.94■■■□□ 2.38
TSSC4-208ENST00000467308 CFTRP13569 1480 aa29.91■■■□□ 2.38
TSSC4-208ENST00000467308 RSF1Q96T23 1441 aaPredicted RBP29.86■■■□□ 2.37
TSSC4-208ENST00000467308 TRIM41Q8WV44 630 aa29.83■■■□□ 2.37
TSSC4-208ENST00000467308 TOP2AP11388 1531 aaKnown RBP29.82■■■□□ 2.36
TSSC4-208ENST00000467308 URB2Q14146 1524 aaKnown RBP29.71■■■□□ 2.35
TSSC4-208ENST00000467308 OSCARQ8IYS5 282 aa29.65■■■□□ 2.34
TSSC4-208ENST00000467308 PRDM2Q13029 1718 aa29.62■■■□□ 2.33
TSSC4-208ENST00000467308 CCDC88BA6NC98 1476 aa29.47■■■□□ 2.31
TSSC4-208ENST00000467308 IFT140Q96RY7 1462 aa29.42■■■□□ 2.3
TSSC4-208ENST00000467308 ZNF608Q9ULD9 1512 aaPredicted RBP29.36■■■□□ 2.29
TSSC4-208ENST00000467308 TOPBP1Q92547 1522 aa29.35■■■□□ 2.29
TSSC4-208ENST00000467308 ABCC8Q09428 1581 aa29.32■■■□□ 2.28
TSSC4-208ENST00000467308 RIMBP3CA6NJZ7 1639 aa29.28■■■□□ 2.28
TSSC4-208ENST00000467308 RIMBP3BA6NNM3 1639 aa29.28■■■□□ 2.28
TSSC4-208ENST00000467308 RIMBP3Q9UFD9 1639 aa29.28■■■□□ 2.28
TSSC4-208ENST00000467308 DNMBPQ6XZF7 1577 aa29.23■■■□□ 2.27
TSSC4-208ENST00000467308 EIF4G3O43432 1585 aaKnown RBP29.21■■■□□ 2.27
TSSC4-208ENST00000467308 ARHGEF11O15085 1522 aa29.18■■■□□ 2.26
TSSC4-208ENST00000467308 TARBP1Q13395 1621 aaKnown RBP29.12■■■□□ 2.25
TSSC4-208ENST00000467308 AQRO60306 1485 aaKnown RBP eCLIP29.06■■■□□ 2.24
TSSC4-208ENST00000467308 CHD1O14646 1710 aa29.04■■■□□ 2.24
TSSC4-208ENST00000467308 POLA1P09884 1462 aaPredicted RBP29.03■■■□□ 2.24
TSSC4-208ENST00000467308 CYB5RLQ6IPT4 315 aa28.94■■■□□ 2.22
TSSC4-208ENST00000467308 RAD54L2Q9Y4B4 1467 aa28.9■■■□□ 2.22
TSSC4-208ENST00000467308 SOGA1O94964 1423 aa28.89■■■□□ 2.22
TSSC4-208ENST00000467308 FBLN2P98095 1184 aa28.89■■■□□ 2.22
TSSC4-208ENST00000467308 ARAP1Q96P48 1450 aa28.86■■■□□ 2.21
TSSC4-208ENST00000467308 WDR97A6NE52 1622 aa28.86■■■□□ 2.21
TSSC4-208ENST00000467308 TDRD9Q8NDG6 1382 aaKnown RBP28.84■■■□□ 2.21
TSSC4-208ENST00000467308 FGD5Q6ZNL6 1462 aa28.8■■■□□ 2.2
TSSC4-208ENST00000467308 SNAPC4Q5SXM2 1469 aa28.77■■■□□ 2.2
TSSC4-208ENST00000467308 CUX1P39880 1505 aa28.74■■■□□ 2.19
TSSC4-208ENST00000467308 MAGI1Q96QZ7 1491 aaPredicted RBP28.73■■■□□ 2.19
TSSC4-208ENST00000467308 CLASP1Q7Z460 1538 aa28.72■■■□□ 2.19
TSSC4-208ENST00000467308 SYNJ1O43426 1573 aa28.68■■■□□ 2.18
TSSC4-208ENST00000467308 GRIN2BQ13224 1484 aa28.68■■■□□ 2.18
TSSC4-208ENST00000467308 TRHP20396 242 aaPredicted RBP28.68■■■□□ 2.18
TSSC4-208ENST00000467308 CHMP7Q8WUX9 453 aaPredicted RBP28.68■■■□□ 2.18
TSSC4-208ENST00000467308 SYNJ2O15056 1496 aa28.63■■■□□ 2.17
TSSC4-208ENST00000467308 PBRM1Q86U86 1689 aa28.54■■■□□ 2.16
TSSC4-208ENST00000467308 GAPVD1Q14C86 1478 aa28.54■■■□□ 2.16
TSSC4-208ENST00000467308 ABCA10Q8WWZ4 1543 aa28.49■■■□□ 2.15
TSSC4-208ENST00000467308 ABCA5Q8WWZ7 1642 aa28.47■■■□□ 2.15
TSSC4-208ENST00000467308 WRNQ14191 1432 aaPredicted RBP eCLIP28.33■■■□□ 2.13
TSSC4-208ENST00000467308 GRIN2AQ12879 1464 aa28.31■■■□□ 2.12
TSSC4-208ENST00000467308 SUPT5HO00267 1087 aaKnown RBP28.27■■■□□ 2.12
TSSC4-208ENST00000467308 ADAMTS12P58397 1594 aa28.26■■■□□ 2.11
TSSC4-208ENST00000467308 BIVM-ERCC5R4GMW8 1640 aa28.25■■■□□ 2.11
TSSC4-208ENST00000467308 TOP2BQ02880 1626 aa28.24■■■□□ 2.11
TSSC4-208ENST00000467308 NUP160Q12769 1436 aa28.24■■■□□ 2.11
TSSC4-208ENST00000467308 CEP170Q5SW79 1584 aa28.21■■■□□ 2.11
TSSC4-208ENST00000467308 ERCC6L2Q5T890 1561 aa28.2■■■□□ 2.11
TSSC4-208ENST00000467308 FHAD1B1AJZ9 1412 aa28.18■■■□□ 2.1
TSSC4-208ENST00000467308 SHROOM2Q13796 1616 aa28.15■■■□□ 2.1
TSSC4-208ENST00000467308 ERICH3Q5RHP9 1530 aa28.14■■■□□ 2.1
TSSC4-208ENST00000467308 AEBP2Q6ZN18 517 aaPredicted RBP28.04■■■□□ 2.08
TSSC4-208ENST00000467308 PRG4Q92954 1404 aaPredicted RBP27.96■■■□□ 2.07
TSSC4-208ENST00000467308 JPH4Q96JJ6 628 aa27.93■■■□□ 2.06
TSSC4-208ENST00000467308 KIF13AQ9H1H9 1805 aa27.89■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms