RNA–Protein interactions for RNA: ENST00000467276.5

RNF144A-205, Transcript of ring finger protein 144A, humanhuman

TSL 3

Gene RNF144A, Length 900 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144A-205ENST00000467276 NISCHQ9Y2I1 1504 aa61.95■■■■■ 7.51
RNF144A-205ENST00000467276 CCDC180Q9P1Z9 1646 aa54.73■■■■■ 6.35
RNF144A-205ENST00000467276 ABCC9O60706 1549 aa53.09■■■■■ 6.09
RNF144A-205ENST00000467276 ZCCHC6Q5VYS8 1495 aaKnown RBP51.7■■■■■ 5.87
RNF144A-205ENST00000467276 DCAF8L2P0C7V8 631 aa51.59■■■■■ 5.85
RNF144A-205ENST00000467276 NACADO15069 1562 aa51.38■■■■■ 5.82
RNF144A-205ENST00000467276 RB1CC1Q8TDY2 1594 aa51.28■■■■■ 5.8
RNF144A-205ENST00000467276 MYO15BQ96JP2 1530 aa51.27■■■■■ 5.8
RNF144A-205ENST00000467276 DCAF1Q9Y4B6 1507 aa51.27■■■■■ 5.8
RNF144A-205ENST00000467276 UNC13AQ9UPW8 1703 aa50.12■■■■■ 5.61
RNF144A-205ENST00000467276 SCRIBQ14160 1630 aa50.02■■■■■ 5.6
RNF144A-205ENST00000467276 PABPN1Q86U42 306 aaKnown RBP eCLIP49.78■■■■■ 5.56
RNF144A-205ENST00000467276 BICRAQ9NZM4 1560 aa49.76■■■■■ 5.56
RNF144A-205ENST00000467276 SHROOM4Q9ULL8 1493 aa49.3■■■■■ 5.48
RNF144A-205ENST00000467276 EIF4G1Q04637 1599 aaKnown RBP48.37■■■■■ 5.33
RNF144A-205ENST00000467276 DNAJC5BQ9UF47 199 aa48.35■■■■■ 5.33
RNF144A-205ENST00000467276 CECR2Q9BXF3 1484 aa48.23■■■■■ 5.31
RNF144A-205ENST00000467276 CC2D2AQ9P2K1 1620 aa48.03■■■■■ 5.28
RNF144A-205ENST00000467276 BAZ1AQ9NRL2 1556 aaPredicted RBP47.93■■■■■ 5.26
RNF144A-205ENST00000467276 SMARCA4P51532 1647 aa47.91■■■■■ 5.26
RNF144A-205ENST00000467276 MROH2BQ7Z745 1585 aa47.77■■■■■ 5.24
RNF144A-205ENST00000467276 ATAD2BQ9ULI0 1458 aa47.55■■■■■ 5.2
RNF144A-205ENST00000467276 SMARCA2P51531 1590 aa47.47■■■■■ 5.19
RNF144A-205ENST00000467276 NCAPD3P42695 1498 aa47.46■■■■■ 5.19
RNF144A-205ENST00000467276 RSF1Q96T23 1441 aaPredicted RBP47.45■■■■■ 5.19
RNF144A-205ENST00000467276 PEG3Q9GZU2 1588 aa47.45■■■■■ 5.19
RNF144A-205ENST00000467276 WIZO95785 1651 aa47.25■■■■■ 5.16
RNF144A-205ENST00000467276 HMGXB3Q12766 1538 aa47.2■■■■■ 5.15
RNF144A-205ENST00000467276 BAZ1BQ9UIG0 1483 aaKnown RBP47.15■■■■■ 5.14
RNF144A-205ENST00000467276 TOP2AP11388 1531 aaKnown RBP46.76■■■■■ 5.08
RNF144A-205ENST00000467276 SUPT5HO00267 1087 aaKnown RBP46.7■■■■■ 5.07
RNF144A-205ENST00000467276 CCDC88BA6NC98 1476 aa46.28■■■■■ 5
RNF144A-205ENST00000467276 NESP48681 1621 aa46.13■■■■■ 4.97
RNF144A-205ENST00000467276 CADPSQ9ULU8 1353 aa46.1■■■■■ 4.97
RNF144A-205ENST00000467276 LAMC3Q9Y6N6 1575 aa46.04■■■■■ 4.96
RNF144A-205ENST00000467276 CFTRP13569 1480 aa45.93■■■■■ 4.94
RNF144A-205ENST00000467276 PDS5BQ9NTI5 1447 aa45.75■■■■■ 4.91
RNF144A-205ENST00000467276 ERCC6Q03468 1493 aa45.67■■■■■ 4.9
RNF144A-205ENST00000467276 FANCD2Q9BXW9 1451 aa45.54■■■■■ 4.88
RNF144A-205ENST00000467276 KIF21AQ7Z4S6 1674 aa45.53■■■■■ 4.88
RNF144A-205ENST00000467276 PRDM2Q13029 1718 aa45.52■■■■■ 4.88
RNF144A-205ENST00000467276 CEP164Q9UPV0 1460 aa45.39■■■■■ 4.86
RNF144A-205ENST00000467276 THOC2Q8NI27 1593 aaKnown RBP45.24■■■■■ 4.83
RNF144A-205ENST00000467276 MRC2Q9UBG0 1479 aa45.23■■■■■ 4.83
RNF144A-205ENST00000467276 URB2Q14146 1524 aaKnown RBP45.06■■■■■ 4.8
RNF144A-205ENST00000467276 WDR62O43379 1518 aa45.06■■■■■ 4.8
RNF144A-205ENST00000467276 CUX2O14529 1486 aa44.98■■■■■ 4.79
RNF144A-205ENST00000467276 ABCC8Q09428 1581 aa44.9■■■■■ 4.78
RNF144A-205ENST00000467276 TOPBP1Q92547 1522 aa44.88■■■■■ 4.78
RNF144A-205ENST00000467276 DNMBPQ6XZF7 1577 aa44.85■■■■■ 4.77
RNF144A-205ENST00000467276 CUX1P39880 1505 aa44.76■■■■■ 4.76
RNF144A-205ENST00000467276 WRNQ14191 1432 aaPredicted RBP eCLIP44.68■■■■■ 4.74
RNF144A-205ENST00000467276 POLA1P09884 1462 aaPredicted RBP44.53■■■■■ 4.72
RNF144A-205ENST00000467276 SYNJ1O43426 1573 aa44.53■■■■■ 4.72
RNF144A-205ENST00000467276 FGD5Q6ZNL6 1462 aa44.51■■■■■ 4.72
RNF144A-205ENST00000467276 TOP2BQ02880 1626 aa44.5■■■■■ 4.71
RNF144A-205ENST00000467276 BIVM-ERCC5R4GMW8 1640 aa44.47■■■■■ 4.71
RNF144A-205ENST00000467276 IFT140Q96RY7 1462 aa44.45■■■■■ 4.71
RNF144A-205ENST00000467276 SOGA1O94964 1423 aa44.4■■■■■ 4.7
RNF144A-205ENST00000467276 RAD54L2Q9Y4B4 1467 aa44.37■■■■■ 4.69
RNF144A-205ENST00000467276 TARBP1Q13395 1621 aaKnown RBP44.34■■■■■ 4.69
RNF144A-205ENST00000467276 ZNF608Q9ULD9 1512 aaPredicted RBP44.23■■■■■ 4.67
RNF144A-205ENST00000467276 ABCA10Q8WWZ4 1543 aa44.11■■■■■ 4.65
RNF144A-205ENST00000467276 TDRD9Q8NDG6 1382 aaKnown RBP44.09■■■■■ 4.65
RNF144A-205ENST00000467276 TRIM41Q8WV44 630 aa44.08■■■■■ 4.65
RNF144A-205ENST00000467276 AQRO60306 1485 aaKnown RBP eCLIP44.08■■■■■ 4.65
RNF144A-205ENST00000467276 WDR97A6NE52 1622 aa44.06■■■■■ 4.64
RNF144A-205ENST00000467276 EIF4G3O43432 1585 aaKnown RBP44.01■■■■■ 4.64
RNF144A-205ENST00000467276 CHIC1Q5VXU3 224 aa43.96■■■■■ 4.63
RNF144A-205ENST00000467276 GAPVD1Q14C86 1478 aa43.87■■■■■ 4.61
RNF144A-205ENST00000467276 ABCA5Q8WWZ7 1642 aa43.84■■■■■ 4.61
RNF144A-205ENST00000467276 GRIN2BQ13224 1484 aa43.77■■■■■ 4.6
RNF144A-205ENST00000467276 KIF27Q86VH2 1401 aa43.71■■■■■ 4.59
RNF144A-205ENST00000467276 PBRM1Q86U86 1689 aa43.66■■■■■ 4.58
RNF144A-205ENST00000467276 SNAPC4Q5SXM2 1469 aa43.62■■■■■ 4.57
RNF144A-205ENST00000467276 MAGI1Q96QZ7 1491 aaPredicted RBP43.58■■■■■ 4.57
RNF144A-205ENST00000467276 ERICH3Q5RHP9 1530 aa43.57■■■■■ 4.56
RNF144A-205ENST00000467276 RUSC2Q8N2Y8 1516 aa43.55■■■■■ 4.56
RNF144A-205ENST00000467276 IGF1RP08069 1367 aa43.54■■■■■ 4.56
RNF144A-205ENST00000467276 FBLN2P98095 1184 aa43.43■■■■■ 4.54
RNF144A-205ENST00000467276 SYNJ2O15056 1496 aa43.41■■■■■ 4.54
RNF144A-205ENST00000467276 CHMP7Q8WUX9 453 aaPredicted RBP43.41■■■■■ 4.54
RNF144A-205ENST00000467276 FHAD1B1AJZ9 1412 aa43.39■■■■■ 4.54
RNF144A-205ENST00000467276 ADAMTS12P58397 1594 aa43.37■■■■■ 4.53
RNF144A-205ENST00000467276 CHD1O14646 1710 aa43.34■■■■■ 4.53
RNF144A-205ENST00000467276 OSCARQ8IYS5 282 aa43.32■■■■■ 4.53
RNF144A-205ENST00000467276 CARMIL1Q5VZK9 1371 aa43.25■■■■■ 4.51
RNF144A-205ENST00000467276 CUL7Q14999 1698 aa43.24■■■■■ 4.51
RNF144A-205ENST00000467276 EEA1Q15075 1411 aa43.23■■■■■ 4.51
RNF144A-205ENST00000467276 GRIN2AQ12879 1464 aa43.2■■■■■ 4.51
RNF144A-205ENST00000467276 CSRNP3Q8WYN3 585 aa43.19■■■■■ 4.5
RNF144A-205ENST00000467276 FAM9AQ8IZU1 332 aaPredicted RBP43.16■■■■■ 4.5
RNF144A-205ENST00000467276 DNAJC5Q9H3Z4 198 aa43.05■■■■■ 4.48
RNF144A-205ENST00000467276 PRXQ9BXM0 1461 aa43.04■■■■■ 4.48
RNF144A-205ENST00000467276 RAPGEF2Q9Y4G8 1499 aa43.02■■■■■ 4.48
RNF144A-205ENST00000467276 NUP160Q12769 1436 aa43.01■■■■■ 4.48
RNF144A-205ENST00000467276 CEP170Q5SW79 1584 aa42.96■■■■■ 4.47
RNF144A-205ENST00000467276 CLASP1Q7Z460 1538 aa42.92■■■■■ 4.46
RNF144A-205ENST00000467276 KIAA0586Q9BVV6 1533 aa42.75■■■■■ 4.43
RNF144A-205ENST00000467276 KIF21BO75037 1637 aa42.72■■■■■ 4.43
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms