RNA–Protein interactions for RNA: ENST00000467250.1

AGAP3-206, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

TSL 3

Gene AGAP3, Length 422 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-206ENST00000467250 NISCHQ9Y2I1 1504 aa33.93■■■■□ 3.02
AGAP3-206ENST00000467250 ABCC9O60706 1549 aa30.49■■■□□ 2.47
AGAP3-206ENST00000467250 CCDC180Q9P1Z9 1646 aa30.47■■■□□ 2.47
AGAP3-206ENST00000467250 RB1CC1Q8TDY2 1594 aa29.01■■■□□ 2.23
AGAP3-206ENST00000467250 NACADO15069 1562 aa28.81■■■□□ 2.2
AGAP3-206ENST00000467250 DNAJC5BQ9UF47 199 aa28.69■■■□□ 2.18
AGAP3-206ENST00000467250 DCAF8L2P0C7V8 631 aa28.53■■■□□ 2.16
AGAP3-206ENST00000467250 MYO15BQ96JP2 1530 aa28.43■■■□□ 2.14
AGAP3-206ENST00000467250 UNC13AQ9UPW8 1703 aa28.38■■■□□ 2.13
AGAP3-206ENST00000467250 PABPN1Q86U42 306 aaKnown RBP eCLIP28.36■■■□□ 2.13
AGAP3-206ENST00000467250 BICRAQ9NZM4 1560 aa28.22■■■□□ 2.11
AGAP3-206ENST00000467250 ZCCHC6Q5VYS8 1495 aaKnown RBP28.12■■■□□ 2.09
AGAP3-206ENST00000467250 DCAF1Q9Y4B6 1507 aa28.04■■■□□ 2.08
AGAP3-206ENST00000467250 SHROOM4Q9ULL8 1493 aa27.82■■■□□ 2.04
AGAP3-206ENST00000467250 SCRIBQ14160 1630 aa27.73■■■□□ 2.03
AGAP3-206ENST00000467250 CC2D2AQ9P2K1 1620 aa27.56■■■□□ 2
AGAP3-206ENST00000467250 EIF4G1Q04637 1599 aaKnown RBP27.5■■□□□ 1.99
AGAP3-206ENST00000467250 CECR2Q9BXF3 1484 aa27.48■■□□□ 1.99
AGAP3-206ENST00000467250 NCAPD3P42695 1498 aa26.62■■□□□ 1.85
AGAP3-206ENST00000467250 ATAD2BQ9ULI0 1458 aa26.52■■□□□ 1.84
AGAP3-206ENST00000467250 SMARCA4P51532 1647 aa26.47■■□□□ 1.83
AGAP3-206ENST00000467250 SMARCA2P51531 1590 aa26.42■■□□□ 1.82
AGAP3-206ENST00000467250 HMGXB3Q12766 1538 aa26.41■■□□□ 1.82
AGAP3-206ENST00000467250 DNAJC5Q9H3Z4 198 aa26.36■■□□□ 1.81
AGAP3-206ENST00000467250 CUX2O14529 1486 aa26.32■■□□□ 1.8
AGAP3-206ENST00000467250 BAZ1AQ9NRL2 1556 aaPredicted RBP26.32■■□□□ 1.8
AGAP3-206ENST00000467250 ERCC6Q03468 1493 aa26.3■■□□□ 1.8
AGAP3-206ENST00000467250 PEG3Q9GZU2 1588 aa26.24■■□□□ 1.79
AGAP3-206ENST00000467250 BAZ1BQ9UIG0 1483 aaKnown RBP26.23■■□□□ 1.79
AGAP3-206ENST00000467250 NESP48681 1621 aa26.21■■□□□ 1.79
AGAP3-206ENST00000467250 MROH2BQ7Z745 1585 aa26.15■■□□□ 1.78
AGAP3-206ENST00000467250 LAMC3Q9Y6N6 1575 aa26■■□□□ 1.75
AGAP3-206ENST00000467250 THOC2Q8NI27 1593 aaKnown RBP25.97■■□□□ 1.75
AGAP3-206ENST00000467250 KIF21AQ7Z4S6 1674 aa25.86■■□□□ 1.73
AGAP3-206ENST00000467250 PDS5BQ9NTI5 1447 aa25.83■■□□□ 1.73
AGAP3-206ENST00000467250 WIZO95785 1651 aa25.81■■□□□ 1.72
AGAP3-206ENST00000467250 CADPSQ9ULU8 1353 aa25.78■■□□□ 1.72
AGAP3-206ENST00000467250 MRC2Q9UBG0 1479 aa25.63■■□□□ 1.69
AGAP3-206ENST00000467250 WDR62O43379 1518 aa25.6■■□□□ 1.69
AGAP3-206ENST00000467250 RSF1Q96T23 1441 aaPredicted RBP25.58■■□□□ 1.69
AGAP3-206ENST00000467250 CEP164Q9UPV0 1460 aa25.51■■□□□ 1.67
AGAP3-206ENST00000467250 CFTRP13569 1480 aa25.5■■□□□ 1.67
AGAP3-206ENST00000467250 TOP2AP11388 1531 aaKnown RBP25.49■■□□□ 1.67
AGAP3-206ENST00000467250 FANCD2Q9BXW9 1451 aa25.48■■□□□ 1.67
AGAP3-206ENST00000467250 URB2Q14146 1524 aaKnown RBP25.31■■□□□ 1.64
AGAP3-206ENST00000467250 PRDM2Q13029 1718 aa25.21■■□□□ 1.63
AGAP3-206ENST00000467250 CCDC88BA6NC98 1476 aa25.2■■□□□ 1.62
AGAP3-206ENST00000467250 TRIM41Q8WV44 630 aa25.11■■□□□ 1.61
AGAP3-206ENST00000467250 OSCARQ8IYS5 282 aa25.06■■□□□ 1.6
AGAP3-206ENST00000467250 IFT140Q96RY7 1462 aa25.01■■□□□ 1.59
AGAP3-206ENST00000467250 TOPBP1Q92547 1522 aa25.01■■□□□ 1.59
AGAP3-206ENST00000467250 ZNF608Q9ULD9 1512 aaPredicted RBP25■■□□□ 1.59
AGAP3-206ENST00000467250 ABCC8Q09428 1581 aa24.92■■□□□ 1.58
AGAP3-206ENST00000467250 DNMBPQ6XZF7 1577 aa24.91■■□□□ 1.58
AGAP3-206ENST00000467250 EIF4G3O43432 1585 aaKnown RBP24.84■■□□□ 1.57
AGAP3-206ENST00000467250 TARBP1Q13395 1621 aaKnown RBP24.81■■□□□ 1.56
AGAP3-206ENST00000467250 RIMBP3CA6NJZ7 1639 aa24.79■■□□□ 1.56
AGAP3-206ENST00000467250 RIMBP3BA6NNM3 1639 aa24.79■■□□□ 1.56
AGAP3-206ENST00000467250 RIMBP3Q9UFD9 1639 aa24.79■■□□□ 1.56
AGAP3-206ENST00000467250 POLA1P09884 1462 aaPredicted RBP24.76■■□□□ 1.55
AGAP3-206ENST00000467250 AQRO60306 1485 aaKnown RBP eCLIP24.74■■□□□ 1.551e-8■■■■□ 23.2
AGAP3-206ENST00000467250 ARHGEF11O15085 1522 aa24.71■■□□□ 1.55
AGAP3-206ENST00000467250 CHD1O14646 1710 aa24.66■■□□□ 1.54
AGAP3-206ENST00000467250 RAD54L2Q9Y4B4 1467 aa24.65■■□□□ 1.54
AGAP3-206ENST00000467250 SOGA1O94964 1423 aa24.61■■□□□ 1.53
AGAP3-206ENST00000467250 FGD5Q6ZNL6 1462 aa24.58■■□□□ 1.52
AGAP3-206ENST00000467250 TDRD9Q8NDG6 1382 aaKnown RBP24.57■■□□□ 1.52
AGAP3-206ENST00000467250 CUX1P39880 1505 aa24.57■■□□□ 1.52
AGAP3-206ENST00000467250 WDR97A6NE52 1622 aa24.53■■□□□ 1.52
AGAP3-206ENST00000467250 FBLN2P98095 1184 aa24.51■■□□□ 1.51
AGAP3-206ENST00000467250 SNAPC4Q5SXM2 1469 aa24.49■■□□□ 1.51
AGAP3-206ENST00000467250 CYB5RLQ6IPT4 315 aa24.48■■□□□ 1.51
AGAP3-206ENST00000467250 ARAP1Q96P48 1450 aa24.47■■□□□ 1.51
AGAP3-206ENST00000467250 MAGI1Q96QZ7 1491 aaPredicted RBP24.43■■□□□ 1.5
AGAP3-206ENST00000467250 CLASP1Q7Z460 1538 aa24.41■■□□□ 1.5
AGAP3-206ENST00000467250 GRIN2BQ13224 1484 aa24.41■■□□□ 1.5
AGAP3-206ENST00000467250 SYNJ1O43426 1573 aa24.34■■□□□ 1.49
AGAP3-206ENST00000467250 SYNJ2O15056 1496 aa24.34■■□□□ 1.49
AGAP3-206ENST00000467250 CHMP7Q8WUX9 453 aaPredicted RBP24.34■■□□□ 1.49
AGAP3-206ENST00000467250 GAPVD1Q14C86 1478 aa24.32■■□□□ 1.48
AGAP3-206ENST00000467250 ABCA10Q8WWZ4 1543 aa24.31■■□□□ 1.48
AGAP3-206ENST00000467250 PBRM1Q86U86 1689 aa24.31■■□□□ 1.48
AGAP3-206ENST00000467250 SUPT5HO00267 1087 aaKnown RBP24.31■■□□□ 1.48
AGAP3-206ENST00000467250 ABCA5Q8WWZ7 1642 aa24.29■■□□□ 1.48
AGAP3-206ENST00000467250 TRHP20396 242 aaPredicted RBP24.18■■□□□ 1.46
AGAP3-206ENST00000467250 WRNQ14191 1432 aaPredicted RBP eCLIP24.17■■□□□ 1.46
AGAP3-206ENST00000467250 BIVM-ERCC5R4GMW8 1640 aa24.16■■□□□ 1.46
AGAP3-206ENST00000467250 TOP2BQ02880 1626 aa24.15■■□□□ 1.46
AGAP3-206ENST00000467250 GRIN2AQ12879 1464 aa24.11■■□□□ 1.45
AGAP3-206ENST00000467250 ADAMTS12P58397 1594 aa24.1■■□□□ 1.45
AGAP3-206ENST00000467250 NUP160Q12769 1436 aa24.05■■□□□ 1.44
AGAP3-206ENST00000467250 CEP170Q5SW79 1584 aa24.04■■□□□ 1.44
AGAP3-206ENST00000467250 ERCC6L2Q5T890 1561 aa24.03■■□□□ 1.44
AGAP3-206ENST00000467250 FHAD1B1AJZ9 1412 aa24.01■■□□□ 1.43
AGAP3-206ENST00000467250 ERICH3Q5RHP9 1530 aa24■■□□□ 1.43
AGAP3-206ENST00000467250 SHROOM2Q13796 1616 aa23.96■■□□□ 1.43
AGAP3-206ENST00000467250 PRG4Q92954 1404 aaPredicted RBP23.78■■□□□ 1.4
AGAP3-206ENST00000467250 RUSC2Q8N2Y8 1516 aa23.77■■□□□ 1.4
AGAP3-206ENST00000467250 JPH4Q96JJ6 628 aa23.75■■□□□ 1.39
AGAP3-206ENST00000467250 IGF1RP08069 1367 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms