RNA–Protein interactions for RNA: ENST00000466910.5

SRRM1-206, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 799 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-206ENST00000466910 NISCHQ9Y2I1 1504 aa47.71■■■■■ 5.23
SRRM1-206ENST00000466910 CCDC180Q9P1Z9 1646 aa42.64■■■■■ 4.42
SRRM1-206ENST00000466910 ABCC9O60706 1549 aa42.51■■■■■ 4.39
SRRM1-206ENST00000466910 RB1CC1Q8TDY2 1594 aa40.56■■■■■ 4.08
SRRM1-206ENST00000466910 DCAF8L2P0C7V8 631 aa40.35■■■■■ 4.05
SRRM1-206ENST00000466910 NACADO15069 1562 aa40.35■■■■■ 4.05
SRRM1-206ENST00000466910 MYO15BQ96JP2 1530 aa39.86■■■■□ 3.97
SRRM1-206ENST00000466910 PABPN1Q86U42 306 aaKnown RBP eCLIP39.67■■■■□ 3.94
SRRM1-206ENST00000466910 DNAJC5BQ9UF47 199 aa39.65■■■■□ 3.94
SRRM1-206ENST00000466910 ZCCHC6Q5VYS8 1495 aaKnown RBP39.58■■■■□ 3.93
SRRM1-206ENST00000466910 UNC13AQ9UPW8 1703 aa39.45■■■■□ 3.91
SRRM1-206ENST00000466910 DCAF1Q9Y4B6 1507 aa39.43■■■■□ 3.9
SRRM1-206ENST00000466910 BICRAQ9NZM4 1560 aa39.27■■■■□ 3.88
SRRM1-206ENST00000466910 SCRIBQ14160 1630 aa38.9■■■■□ 3.82
SRRM1-206ENST00000466910 SHROOM4Q9ULL8 1493 aa38.87■■■■□ 3.81
SRRM1-206ENST00000466910 CC2D2AQ9P2K1 1620 aa38.36■■■■□ 3.73
SRRM1-206ENST00000466910 EIF4G1Q04637 1599 aaKnown RBP38.35■■■■□ 3.73
SRRM1-206ENST00000466910 CECR2Q9BXF3 1484 aa38.28■■■■□ 3.72
SRRM1-206ENST00000466910 NCAPD3P42695 1498 aa37.26■■■■□ 3.56
SRRM1-206ENST00000466910 ATAD2BQ9ULI0 1458 aa37.17■■■■□ 3.54
SRRM1-206ENST00000466910 SMARCA4P51532 1647 aa37.13■■■■□ 3.53
SRRM1-206ENST00000466910 SMARCA2P51531 1590 aa37.08■■■■□ 3.53
SRRM1-206ENST00000466910 BAZ1AQ9NRL2 1556 aaPredicted RBP37.04■■■■□ 3.52
SRRM1-206ENST00000466910 HMGXB3Q12766 1538 aa36.96■■■■□ 3.51
SRRM1-206ENST00000466910 BAZ1BQ9UIG0 1483 aaKnown RBP36.84■■■■□ 3.49
SRRM1-206ENST00000466910 PEG3Q9GZU2 1588 aa36.77■■■■□ 3.48
SRRM1-206ENST00000466910 ERCC6Q03468 1493 aa36.75■■■■□ 3.47
SRRM1-206ENST00000466910 MROH2BQ7Z745 1585 aa36.74■■■■□ 3.47
SRRM1-206ENST00000466910 CUX2O14529 1486 aa36.56■■■■□ 3.44
SRRM1-206ENST00000466910 NESP48681 1621 aa36.54■■■■□ 3.44
SRRM1-206ENST00000466910 LAMC3Q9Y6N6 1575 aa36.35■■■■□ 3.41
SRRM1-206ENST00000466910 DNAJC5Q9H3Z4 198 aa36.31■■■■□ 3.4
SRRM1-206ENST00000466910 WIZO95785 1651 aa36.28■■■■□ 3.4
SRRM1-206ENST00000466910 PDS5BQ9NTI5 1447 aa36.23■■■■□ 3.39
SRRM1-206ENST00000466910 CADPSQ9ULU8 1353 aa36.18■■■■□ 3.38
SRRM1-206ENST00000466910 RSF1Q96T23 1441 aaPredicted RBP36.12■■■■□ 3.37
SRRM1-206ENST00000466910 THOC2Q8NI27 1593 aaKnown RBP36.06■■■■□ 3.36
SRRM1-206ENST00000466910 KIF21AQ7Z4S6 1674 aa36■■■■□ 3.35
SRRM1-206ENST00000466910 TOP2AP11388 1531 aaKnown RBP35.88■■■■□ 3.33
SRRM1-206ENST00000466910 MRC2Q9UBG0 1479 aa35.83■■■■□ 3.33
SRRM1-206ENST00000466910 CFTRP13569 1480 aa35.78■■■■□ 3.32
SRRM1-206ENST00000466910 CEP164Q9UPV0 1460 aa35.75■■■■□ 3.31
SRRM1-206ENST00000466910 FANCD2Q9BXW9 1451 aa35.73■■■■□ 3.31
SRRM1-206ENST00000466910 WDR62O43379 1518 aa35.69■■■■□ 3.3
SRRM1-206ENST00000466910 CCDC88BA6NC98 1476 aa35.51■■■■□ 3.28
SRRM1-206ENST00000466910 URB2Q14146 1524 aaKnown RBP35.37■■■■□ 3.25
SRRM1-206ENST00000466910 PRDM2Q13029 1718 aa35.28■■■■□ 3.24
SRRM1-206ENST00000466910 ABCC8Q09428 1581 aa35.07■■■■□ 3.2
SRRM1-206ENST00000466910 TOPBP1Q92547 1522 aa35.06■■■■□ 3.2
SRRM1-206ENST00000466910 IFT140Q96RY7 1462 aa35.04■■■■□ 3.2
SRRM1-206ENST00000466910 OSCARQ8IYS5 282 aa35.03■■■■□ 3.2
SRRM1-206ENST00000466910 DNMBPQ6XZF7 1577 aa34.93■■■■□ 3.18
SRRM1-206ENST00000466910 ZNF608Q9ULD9 1512 aaPredicted RBP34.91■■■■□ 3.18
SRRM1-206ENST00000466910 TRIM41Q8WV44 630 aa34.86■■■■□ 3.17
SRRM1-206ENST00000466910 SUPT5HO00267 1087 aaKnown RBP34.81■■■■□ 3.16
SRRM1-206ENST00000466910 POLA1P09884 1462 aaPredicted RBP34.71■■■■□ 3.15
SRRM1-206ENST00000466910 EIF4G3O43432 1585 aaKnown RBP34.69■■■■□ 3.14
SRRM1-206ENST00000466910 TARBP1Q13395 1621 aaKnown RBP34.66■■■■□ 3.14
SRRM1-206ENST00000466910 AQRO60306 1485 aaKnown RBP eCLIP34.66■■■■□ 3.146e-7■■■■□ 19.6
SRRM1-206ENST00000466910 SOGA1O94964 1423 aa34.63■■■■□ 3.13
SRRM1-206ENST00000466910 RAD54L2Q9Y4B4 1467 aa34.58■■■■□ 3.13
SRRM1-206ENST00000466910 FGD5Q6ZNL6 1462 aa34.53■■■■□ 3.12
SRRM1-206ENST00000466910 TDRD9Q8NDG6 1382 aaKnown RBP34.51■■■■□ 3.12
SRRM1-206ENST00000466910 CUX1P39880 1505 aa34.51■■■■□ 3.12
SRRM1-206ENST00000466910 FBLN2P98095 1184 aa34.5■■■■□ 3.11
SRRM1-206ENST00000466910 WDR97A6NE52 1622 aa34.38■■■■□ 3.09
SRRM1-206ENST00000466910 RIMBP3CA6NJZ7 1639 aa34.37■■■■□ 3.09
SRRM1-206ENST00000466910 RIMBP3BA6NNM3 1639 aa34.37■■■■□ 3.09
SRRM1-206ENST00000466910 RIMBP3Q9UFD9 1639 aa34.37■■■■□ 3.09
SRRM1-206ENST00000466910 CHD1O14646 1710 aa34.33■■■■□ 3.09
SRRM1-206ENST00000466910 ARHGEF11O15085 1522 aa34.33■■■■□ 3.09
SRRM1-206ENST00000466910 SNAPC4Q5SXM2 1469 aa34.3■■■■□ 3.08
SRRM1-206ENST00000466910 GRIN2BQ13224 1484 aa34.28■■■■□ 3.08
SRRM1-206ENST00000466910 CHMP7Q8WUX9 453 aaPredicted RBP34.28■■■■□ 3.08
SRRM1-206ENST00000466910 MAGI1Q96QZ7 1491 aaPredicted RBP34.24■■■■□ 3.07
SRRM1-206ENST00000466910 GAPVD1Q14C86 1478 aa34.19■■■■□ 3.06
SRRM1-206ENST00000466910 CYB5RLQ6IPT4 315 aa34.18■■■■□ 3.06
SRRM1-206ENST00000466910 ABCA10Q8WWZ4 1543 aa34.17■■■■□ 3.06
SRRM1-206ENST00000466910 WRNQ14191 1432 aaPredicted RBP eCLIP34.14■■■■□ 3.06
SRRM1-206ENST00000466910 SYNJ2O15056 1496 aa34.13■■■■□ 3.05
SRRM1-206ENST00000466910 SYNJ1O43426 1573 aa34.07■■■■□ 3.05
SRRM1-206ENST00000466910 PBRM1Q86U86 1689 aa34.03■■■■□ 3.04
SRRM1-206ENST00000466910 TOP2BQ02880 1626 aa34.02■■■■□ 3.04
SRRM1-206ENST00000466910 ABCA5Q8WWZ7 1642 aa34.02■■■■□ 3.04
SRRM1-206ENST00000466910 ARAP1Q96P48 1450 aa34■■■■□ 3.03
SRRM1-206ENST00000466910 CLASP1Q7Z460 1538 aa33.99■■■■□ 3.03
SRRM1-206ENST00000466910 BIVM-ERCC5R4GMW8 1640 aa33.98■■■■□ 3.03
SRRM1-206ENST00000466910 GRIN2AQ12879 1464 aa33.81■■■■□ 3
SRRM1-206ENST00000466910 FHAD1B1AJZ9 1412 aa33.78■■■■□ 3
SRRM1-206ENST00000466910 ADAMTS12P58397 1594 aa33.77■■■■□ 3
SRRM1-206ENST00000466910 TRHP20396 242 aaPredicted RBP33.76■■■□□ 2.99
SRRM1-206ENST00000466910 ERICH3Q5RHP9 1530 aa33.74■■■□□ 2.99
SRRM1-206ENST00000466910 NUP160Q12769 1436 aa33.69■■■□□ 2.98
SRRM1-206ENST00000466910 CEP170Q5SW79 1584 aa33.61■■■□□ 2.97
SRRM1-206ENST00000466910 KIF27Q86VH2 1401 aa33.47■■■□□ 2.95
SRRM1-206ENST00000466910 ERCC6L2Q5T890 1561 aa33.47■■■□□ 2.95
SRRM1-206ENST00000466910 JPH4Q96JJ6 628 aa33.44■■■□□ 2.94
SRRM1-206ENST00000466910 SHROOM2Q13796 1616 aa33.42■■■□□ 2.94
SRRM1-206ENST00000466910 IGF1RP08069 1367 aa33.41■■■□□ 2.94
SRRM1-206ENST00000466910 PRG4Q92954 1404 aaPredicted RBP33.38■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms