RNA–Protein interactions for RNA: ENST00000466818.1

SLCO4A1-204, Transcript of solute carrier organic anion transporter family member 4A1, humanhuman

TSL 3

Gene SLCO4A1, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLCO4A1-204ENST00000466818 AEBP2Q6ZN18 517 aaPredicted RBP25.21■■□□□ 1.63
SLCO4A1-204ENST00000466818 CHIC1Q5VXU3 224 aa25.08■■□□□ 1.61
SLCO4A1-204ENST00000466818 PHF23Q9BUL5 403 aaPredicted RBP22.13■■□□□ 1.13
SLCO4A1-204ENST00000466818 NISCHQ9Y2I1 1504 aa21.51■■□□□ 1.03
SLCO4A1-204ENST00000466818 SENP3Q9H4L4 574 aaPredicted RBP21.3■■□□□ 1
SLCO4A1-204ENST00000466818 PLPPR3Q6T4P5 718 aa20.58■□□□□ 0.89
SLCO4A1-204ENST00000466818 FOXD1Q16676 465 aa19.72■□□□□ 0.75
SLCO4A1-204ENST00000466818 ADRA2BP18089 450 aa19.37■□□□□ 0.69
SLCO4A1-204ENST00000466818 PPP6R1Q9UPN7 881 aa19.37■□□□□ 0.69
SLCO4A1-204ENST00000466818 CCDC180Q9P1Z9 1646 aa19.14■□□□□ 0.66
SLCO4A1-204ENST00000466818 ABCC9O60706 1549 aa18.75■□□□□ 0.59
SLCO4A1-204ENST00000466818 PIAS4Q8N2W9 510 aaPredicted RBP18.71■□□□□ 0.59
SLCO4A1-204ENST00000466818 KCNA4P22459 653 aa18.33■□□□□ 0.52
SLCO4A1-204ENST00000466818 PPP4R3CPQ6ZMV5 832 aa18.21■□□□□ 0.51
SLCO4A1-204ENST00000466818 DCAF8L2P0C7V8 631 aa18.17■□□□□ 0.5
SLCO4A1-204ENST00000466818 RB1CC1Q8TDY2 1594 aa18.04■□□□□ 0.48
SLCO4A1-204ENST00000466818 MSH5O43196 834 aa17.98■□□□□ 0.47
SLCO4A1-204ENST00000466818 NACADO15069 1562 aa17.98■□□□□ 0.47
SLCO4A1-204ENST00000466818 ZCCHC6Q5VYS8 1495 aaKnown RBP17.89■□□□□ 0.45
SLCO4A1-204ENST00000466818 NCBP3Q53F19 620 aaKnown RBP17.86■□□□□ 0.45
SLCO4A1-204ENST00000466818 MYO15BQ96JP2 1530 aa17.79■□□□□ 0.44
SLCO4A1-204ENST00000466818 DCAF1Q9Y4B6 1507 aa17.74■□□□□ 0.43
SLCO4A1-204ENST00000466818 SCAF1Q9H7N4 1312 aaKnown RBP17.72■□□□□ 0.43
SLCO4A1-204ENST00000466818 UNC13AQ9UPW8 1703 aa17.67■□□□□ 0.42
SLCO4A1-204ENST00000466818 NPM3O75607 178 aaKnown RBP17.61■□□□□ 0.41
SLCO4A1-204ENST00000466818 EHMT2Q96KQ7 1210 aa17.59■□□□□ 0.41
SLCO4A1-204ENST00000466818 CNKSR2Q8WXI2 1034 aa17.58■□□□□ 0.4
SLCO4A1-204ENST00000466818 PABPN1Q86U42 306 aaKnown RBP eCLIP17.54■□□□□ 0.4
SLCO4A1-204ENST00000466818 SLC4A1APQ9BWU0 796 aaKnown RBP17.53■□□□□ 0.4
SLCO4A1-204ENST00000466818 SCRIBQ14160 1630 aa17.53■□□□□ 0.4
SLCO4A1-204ENST00000466818 MAPK8IP2Q13387 824 aaPredicted RBP17.45■□□□□ 0.38
SLCO4A1-204ENST00000466818 BICRAQ9NZM4 1560 aa17.41■□□□□ 0.38
SLCO4A1-204ENST00000466818 SHROOM4Q9ULL8 1493 aa17.2■□□□□ 0.34
SLCO4A1-204ENST00000466818 CSRNP3Q8WYN3 585 aa17.18■□□□□ 0.34
SLCO4A1-204ENST00000466818 RNF216Q9NWF9 866 aaPredicted RBP17.13■□□□□ 0.33
SLCO4A1-204ENST00000466818 DNAJC5BQ9UF47 199 aa17.11■□□□□ 0.33
SLCO4A1-204ENST00000466818 DMRT2Q9Y5R5 561 aa17.08■□□□□ 0.32
SLCO4A1-204ENST00000466818 EIF4G1Q04637 1599 aaKnown RBP16.99■□□□□ 0.31
SLCO4A1-204ENST00000466818 CC2D2AQ9P2K1 1620 aa16.95■□□□□ 0.3
SLCO4A1-204ENST00000466818 HOXD11P31277 338 aaPredicted RBP16.92■□□□□ 0.3
SLCO4A1-204ENST00000466818 ZBTB22O15209 634 aa16.87■□□□□ 0.29
SLCO4A1-204ENST00000466818 CECR2Q9BXF3 1484 aa16.82■□□□□ 0.28
SLCO4A1-204ENST00000466818 SMARCA4P51532 1647 aa16.72■□□□□ 0.27
SLCO4A1-204ENST00000466818 FOXD4L1Q9NU39 408 aa16.72■□□□□ 0.27
SLCO4A1-204ENST00000466818 BAZ1AQ9NRL2 1556 aaPredicted RBP16.7■□□□□ 0.26
SLCO4A1-204ENST00000466818 SMARCA2P51531 1590 aa16.6■□□□□ 0.25
SLCO4A1-204ENST00000466818 MROH2BQ7Z745 1585 aa16.59■□□□□ 0.25
SLCO4A1-204ENST00000466818 ATAD2BQ9ULI0 1458 aa16.58■□□□□ 0.24
SLCO4A1-204ENST00000466818 NCAPD3P42695 1498 aa16.54■□□□□ 0.24
SLCO4A1-204ENST00000466818 BAZ1BQ9UIG0 1483 aaKnown RBP16.51■□□□□ 0.23
SLCO4A1-204ENST00000466818 SLC4A2P04920 1241 aa16.51■□□□□ 0.23
SLCO4A1-204ENST00000466818 HMGXB3Q12766 1538 aa16.49■□□□□ 0.23
SLCO4A1-204ENST00000466818 PEG3Q9GZU2 1588 aa16.47■□□□□ 0.23
SLCO4A1-204ENST00000466818 WIZO95785 1651 aa16.47■□□□□ 0.23
SLCO4A1-204ENST00000466818 RSF1Q96T23 1441 aaPredicted RBP16.38■□□□□ 0.21
SLCO4A1-204ENST00000466818 DCAF8L1A6NGE4 600 aa16.32■□□□□ 0.2
SLCO4A1-204ENST00000466818 TOP2AP11388 1531 aaKnown RBP16.25■□□□□ 0.19
SLCO4A1-204ENST00000466818 MYCNP04198 464 aaPredicted RBP16.25■□□□□ 0.19
SLCO4A1-204ENST00000466818 ERCC6Q03468 1493 aa16.21■□□□□ 0.19
SLCO4A1-204ENST00000466818 NESP48681 1621 aa16.2■□□□□ 0.18
SLCO4A1-204ENST00000466818 LAMC3Q9Y6N6 1575 aa16.17■□□□□ 0.18
SLCO4A1-204ENST00000466818 SUPT5HO00267 1087 aaKnown RBP16.16■□□□□ 0.18
SLCO4A1-204ENST00000466818 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.13■□□□□ 0.17
SLCO4A1-204ENST00000466818 CADPSQ9ULU8 1353 aa16.11■□□□□ 0.17
SLCO4A1-204ENST00000466818 ATXN8OSP0DMR3 200 aa16.1■□□□□ 0.17
SLCO4A1-204ENST00000466818 KIF21AQ7Z4S6 1674 aa16.08■□□□□ 0.16
SLCO4A1-204ENST00000466818 PDS5BQ9NTI5 1447 aa16.07■□□□□ 0.16
SLCO4A1-204ENST00000466818 CCDC88BA6NC98 1476 aa16.06■□□□□ 0.16
SLCO4A1-204ENST00000466818 PRDM2Q13029 1718 aa15.99■□□□□ 0.15
SLCO4A1-204ENST00000466818 CFTRP13569 1480 aa15.98■□□□□ 0.15
SLCO4A1-204ENST00000466818 FANCD2Q9BXW9 1451 aa15.95■□□□□ 0.14
SLCO4A1-204ENST00000466818 CEP164Q9UPV0 1460 aa15.94■□□□□ 0.14
SLCO4A1-204ENST00000466818 THOC2Q8NI27 1593 aaKnown RBP15.93■□□□□ 0.14
SLCO4A1-204ENST00000466818 CUX2O14529 1486 aa15.93■□□□□ 0.14
SLCO4A1-204ENST00000466818 U3KPZ7 1027 aaPredicted RBP15.92■□□□□ 0.14
SLCO4A1-204ENST00000466818 MRC2Q9UBG0 1479 aa15.89■□□□□ 0.13
SLCO4A1-204ENST00000466818 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.88■□□□□ 0.13
SLCO4A1-204ENST00000466818 HNRNPUL2Q1KMD3 747 aaKnown RBP15.88■□□□□ 0.13
SLCO4A1-204ENST00000466818 SAMD1Q6SPF0 538 aaPredicted RBP15.84■□□□□ 0.13
SLCO4A1-204ENST00000466818 WDR62O43379 1518 aa15.8■□□□□ 0.12
SLCO4A1-204ENST00000466818 ATF5Q9Y2D1 282 aaPredicted RBP15.8■□□□□ 0.12
SLCO4A1-204ENST00000466818 URB2Q14146 1524 aaKnown RBP15.75■□□□□ 0.11
SLCO4A1-204ENST00000466818 ABCC8Q09428 1581 aa15.7■□□□□ 0.1
SLCO4A1-204ENST00000466818 TOPBP1Q92547 1522 aa15.68■□□□□ 0.1
SLCO4A1-204ENST00000466818 DNMBPQ6XZF7 1577 aa15.68■□□□□ 0.1
SLCO4A1-204ENST00000466818 APLP2Q06481 763 aa15.59■□□□□ 0.09
SLCO4A1-204ENST00000466818 IFT140Q96RY7 1462 aa15.59■□□□□ 0.09
SLCO4A1-204ENST00000466818 CUX1P39880 1505 aa15.56■□□□□ 0.08
SLCO4A1-204ENST00000466818 POTEDQ86YR6 584 aa15.54■□□□□ 0.08
SLCO4A1-204ENST00000466818 POLA1P09884 1462 aaPredicted RBP15.53■□□□□ 0.08
SLCO4A1-204ENST00000466818 FGD5Q6ZNL6 1462 aa15.53■□□□□ 0.08
SLCO4A1-204ENST00000466818 SOGA1O94964 1423 aa15.52■□□□□ 0.08
SLCO4A1-204ENST00000466818 ZNF608Q9ULD9 1512 aaPredicted RBP15.5■□□□□ 0.07
SLCO4A1-204ENST00000466818 FKBP8Q14318 412 aa15.5■□□□□ 0.07
SLCO4A1-204ENST00000466818 RAD54L2Q9Y4B4 1467 aa15.5■□□□□ 0.07
SLCO4A1-204ENST00000466818 WRNQ14191 1432 aaPredicted RBP eCLIP15.5■□□□□ 0.07
SLCO4A1-204ENST00000466818 TARBP1Q13395 1621 aaKnown RBP15.5■□□□□ 0.07
SLCO4A1-204ENST00000466818 ZNF219Q9P2Y4 722 aaPredicted RBP15.49■□□□□ 0.07
SLCO4A1-204ENST00000466818 EIF4G3O43432 1585 aaKnown RBP15.47■□□□□ 0.07
SLCO4A1-204ENST00000466818 BIVM-ERCC5R4GMW8 1640 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms