RNA–Protein interactions for RNA: ENST00000466568.1

ZSWIM8-209, Transcript of zinc finger SWIM-type containing 8, humanhuman

TSL 2

Gene ZSWIM8, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM8-209ENST00000466568 NISCHQ9Y2I1 1504 aa25.8■■□□□ 1.72
ZSWIM8-209ENST00000466568 CCDC180Q9P1Z9 1646 aa22.83■■□□□ 1.25
ZSWIM8-209ENST00000466568 ABCC9O60706 1549 aa22.42■■□□□ 1.18
ZSWIM8-209ENST00000466568 ZCCHC6Q5VYS8 1495 aaKnown RBP21.58■■□□□ 1.05
ZSWIM8-209ENST00000466568 RB1CC1Q8TDY2 1594 aa21.54■■□□□ 1.04
ZSWIM8-209ENST00000466568 DCAF8L2P0C7V8 631 aa21.43■■□□□ 1.02
ZSWIM8-209ENST00000466568 NACADO15069 1562 aa21.41■■□□□ 1.02
ZSWIM8-209ENST00000466568 DCAF1Q9Y4B6 1507 aa21.35■■□□□ 1.01
ZSWIM8-209ENST00000466568 MYO15BQ96JP2 1530 aa21.29■■□□□ 1
ZSWIM8-209ENST00000466568 UNC13AQ9UPW8 1703 aa20.96■□□□□ 0.95
ZSWIM8-209ENST00000466568 PABPN1Q86U42 306 aaKnown RBP eCLIP20.88■□□□□ 0.931e-6■■■■□ 24.5
ZSWIM8-209ENST00000466568 SCRIBQ14160 1630 aa20.87■□□□□ 0.93
ZSWIM8-209ENST00000466568 BICRAQ9NZM4 1560 aa20.72■□□□□ 0.91
ZSWIM8-209ENST00000466568 SHROOM4Q9ULL8 1493 aa20.64■□□□□ 0.89
ZSWIM8-209ENST00000466568 DNAJC5BQ9UF47 199 aa20.59■□□□□ 0.89
ZSWIM8-209ENST00000466568 EIF4G1Q04637 1599 aaKnown RBP20.29■□□□□ 0.84
ZSWIM8-209ENST00000466568 CC2D2AQ9P2K1 1620 aa20.27■□□□□ 0.84
ZSWIM8-209ENST00000466568 CECR2Q9BXF3 1484 aa20.19■□□□□ 0.82
ZSWIM8-209ENST00000466568 SMARCA4P51532 1647 aa19.99■□□□□ 0.79
ZSWIM8-209ENST00000466568 BAZ1AQ9NRL2 1556 aaPredicted RBP19.95■□□□□ 0.78
ZSWIM8-209ENST00000466568 MROH2BQ7Z745 1585 aa19.92■□□□□ 0.78
ZSWIM8-209ENST00000466568 PEG3Q9GZU2 1588 aa19.78■□□□□ 0.76
ZSWIM8-209ENST00000466568 RSF1Q96T23 1441 aaPredicted RBP19.77■□□□□ 0.76
ZSWIM8-209ENST00000466568 WIZO95785 1651 aa19.75■□□□□ 0.75
ZSWIM8-209ENST00000466568 ATAD2BQ9ULI0 1458 aa19.74■□□□□ 0.75
ZSWIM8-209ENST00000466568 SMARCA2P51531 1590 aa19.74■□□□□ 0.75
ZSWIM8-209ENST00000466568 NCAPD3P42695 1498 aa19.68■□□□□ 0.74
ZSWIM8-209ENST00000466568 HMGXB3Q12766 1538 aa19.64■□□□□ 0.73
ZSWIM8-209ENST00000466568 BAZ1BQ9UIG0 1483 aaKnown RBP19.6■□□□□ 0.73
ZSWIM8-209ENST00000466568 TOP2AP11388 1531 aaKnown RBP19.52■□□□□ 0.72
ZSWIM8-209ENST00000466568 ERCC6Q03468 1493 aa19.48■□□□□ 0.71
ZSWIM8-209ENST00000466568 SUPT5HO00267 1087 aaKnown RBP19.44■□□□□ 0.7
ZSWIM8-209ENST00000466568 LAMC3Q9Y6N6 1575 aa19.3■□□□□ 0.68
ZSWIM8-209ENST00000466568 CUX2O14529 1486 aa19.28■□□□□ 0.68
ZSWIM8-209ENST00000466568 NESP48681 1621 aa19.27■□□□□ 0.68
ZSWIM8-209ENST00000466568 CCDC88BA6NC98 1476 aa19.27■□□□□ 0.67
ZSWIM8-209ENST00000466568 PDS5BQ9NTI5 1447 aa19.2■□□□□ 0.66
ZSWIM8-209ENST00000466568 CADPSQ9ULU8 1353 aa19.13■□□□□ 0.65
ZSWIM8-209ENST00000466568 KIF21AQ7Z4S6 1674 aa19.11■□□□□ 0.65
ZSWIM8-209ENST00000466568 CFTRP13569 1480 aa19.08■□□□□ 0.64
ZSWIM8-209ENST00000466568 PRDM2Q13029 1718 aa19.08■□□□□ 0.64
ZSWIM8-209ENST00000466568 THOC2Q8NI27 1593 aaKnown RBP19.07■□□□□ 0.64
ZSWIM8-209ENST00000466568 CEP164Q9UPV0 1460 aa19■□□□□ 0.63
ZSWIM8-209ENST00000466568 MRC2Q9UBG0 1479 aa18.99■□□□□ 0.63
ZSWIM8-209ENST00000466568 FANCD2Q9BXW9 1451 aa18.95■□□□□ 0.62
ZSWIM8-209ENST00000466568 DNAJC5Q9H3Z4 198 aa18.93■□□□□ 0.62
ZSWIM8-209ENST00000466568 WDR62O43379 1518 aa18.9■□□□□ 0.62
ZSWIM8-209ENST00000466568 URB2Q14146 1524 aaKnown RBP18.74■□□□□ 0.59
ZSWIM8-209ENST00000466568 ABCC8Q09428 1581 aa18.72■□□□□ 0.59
ZSWIM8-209ENST00000466568 CUX1P39880 1505 aa18.68■□□□□ 0.58
ZSWIM8-209ENST00000466568 DNMBPQ6XZF7 1577 aa18.68■□□□□ 0.58
ZSWIM8-209ENST00000466568 TOPBP1Q92547 1522 aa18.66■□□□□ 0.58
ZSWIM8-209ENST00000466568 SYNJ1O43426 1573 aa18.64■□□□□ 0.58
ZSWIM8-209ENST00000466568 BIVM-ERCC5R4GMW8 1640 aa18.62■□□□□ 0.57
ZSWIM8-209ENST00000466568 WRNQ14191 1432 aaPredicted RBP eCLIP18.6■□□□□ 0.57
ZSWIM8-209ENST00000466568 TOP2BQ02880 1626 aa18.6■□□□□ 0.57
ZSWIM8-209ENST00000466568 IFT140Q96RY7 1462 aa18.58■□□□□ 0.57
ZSWIM8-209ENST00000466568 POLA1P09884 1462 aaPredicted RBP18.52■□□□□ 0.56
ZSWIM8-209ENST00000466568 FGD5Q6ZNL6 1462 aa18.52■□□□□ 0.56
ZSWIM8-209ENST00000466568 TARBP1Q13395 1621 aaKnown RBP18.49■□□□□ 0.55
ZSWIM8-209ENST00000466568 WDR97A6NE52 1622 aa18.46■□□□□ 0.55
ZSWIM8-209ENST00000466568 RAD54L2Q9Y4B4 1467 aa18.45■□□□□ 0.54
ZSWIM8-209ENST00000466568 OSCARQ8IYS5 282 aa18.44■□□□□ 0.54
ZSWIM8-209ENST00000466568 EIF4G3O43432 1585 aaKnown RBP18.43■□□□□ 0.54
ZSWIM8-209ENST00000466568 ZNF608Q9ULD9 1512 aaPredicted RBP18.42■□□□□ 0.54
ZSWIM8-209ENST00000466568 SOGA1O94964 1423 aa18.39■□□□□ 0.53
ZSWIM8-209ENST00000466568 CHIC1Q5VXU3 224 aa18.37■□□□□ 0.53
ZSWIM8-209ENST00000466568 ABCA10Q8WWZ4 1543 aa18.35■□□□□ 0.53
ZSWIM8-209ENST00000466568 ABCA5Q8WWZ7 1642 aa18.31■□□□□ 0.52
ZSWIM8-209ENST00000466568 AQRO60306 1485 aaKnown RBP eCLIP18.31■□□□□ 0.527e-9■■■□□ 14.9
ZSWIM8-209ENST00000466568 TRIM41Q8WV44 630 aa18.3■□□□□ 0.52
ZSWIM8-209ENST00000466568 FBLN2P98095 1184 aa18.29■□□□□ 0.52
ZSWIM8-209ENST00000466568 TDRD9Q8NDG6 1382 aaKnown RBP18.27■□□□□ 0.51
ZSWIM8-209ENST00000466568 PBRM1Q86U86 1689 aa18.26■□□□□ 0.51
ZSWIM8-209ENST00000466568 CHD1O14646 1710 aa18.25■□□□□ 0.51
ZSWIM8-209ENST00000466568 GAPVD1Q14C86 1478 aa18.21■□□□□ 0.51
ZSWIM8-209ENST00000466568 GRIN2BQ13224 1484 aa18.2■□□□□ 0.5
ZSWIM8-209ENST00000466568 RUSC2Q8N2Y8 1516 aa18.2■□□□□ 0.5
ZSWIM8-209ENST00000466568 SNAPC4Q5SXM2 1469 aa18.2■□□□□ 0.5
ZSWIM8-209ENST00000466568 MAGI1Q96QZ7 1491 aaPredicted RBP18.19■□□□□ 0.5
ZSWIM8-209ENST00000466568 CHMP7Q8WUX9 453 aaPredicted RBP18.18■□□□□ 0.5
ZSWIM8-209ENST00000466568 KIF27Q86VH2 1401 aa18.15■□□□□ 0.5
ZSWIM8-209ENST00000466568 RIMBP3CA6NJZ7 1639 aa18.13■□□□□ 0.49
ZSWIM8-209ENST00000466568 RIMBP3BA6NNM3 1639 aa18.13■□□□□ 0.49
ZSWIM8-209ENST00000466568 RIMBP3Q9UFD9 1639 aa18.13■□□□□ 0.49
ZSWIM8-209ENST00000466568 ERICH3Q5RHP9 1530 aa18.13■□□□□ 0.49
ZSWIM8-209ENST00000466568 ADAMTS12P58397 1594 aa18.1■□□□□ 0.49
ZSWIM8-209ENST00000466568 ARHGEF11O15085 1522 aa18.1■□□□□ 0.49
ZSWIM8-209ENST00000466568 SYNJ2O15056 1496 aa18.1■□□□□ 0.49
ZSWIM8-209ENST00000466568 IGF1RP08069 1367 aa18.06■□□□□ 0.48
ZSWIM8-209ENST00000466568 CUL7Q14999 1698 aa18.06■□□□□ 0.48
ZSWIM8-209ENST00000466568 EEA1Q15075 1411 aa18.01■□□□□ 0.47
ZSWIM8-209ENST00000466568 FHAD1B1AJZ9 1412 aa17.99■□□□□ 0.47
ZSWIM8-209ENST00000466568 CLASP1Q7Z460 1538 aa17.98■□□□□ 0.47
ZSWIM8-209ENST00000466568 CYB5RLQ6IPT4 315 aa17.97■□□□□ 0.47
ZSWIM8-209ENST00000466568 FAM9AQ8IZU1 332 aaPredicted RBP17.97■□□□□ 0.47
ZSWIM8-209ENST00000466568 PRXQ9BXM0 1461 aa17.95■□□□□ 0.46
ZSWIM8-209ENST00000466568 GRIN2AQ12879 1464 aa17.95■□□□□ 0.46
ZSWIM8-209ENST00000466568 CARMIL1Q5VZK9 1371 aa17.94■□□□□ 0.46
ZSWIM8-209ENST00000466568 CSRNP3Q8WYN3 585 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms